RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 HNRNPUQ00839 825 aaKnown RBP eCLIP0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 TEKQ02763 1124 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 TTLL12Q14166 644 aaPredicted RBP0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 TRIP4Q15650 581 aaPredicted RBP0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 SLC14A2Q15849 920 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 KIF4BQ2VIQ3 1234 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 MAP7D1Q3KQU3 841 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 XKR4Q5GH76 650 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 HECTD2Q5U5R9 776 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 AWAT2Q6E213 333 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 C11orf87Q6NUJ2 197 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 ZNF746Q6NUN9 644 aaPredicted RBP0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 MAMDC4Q6UXC1 1216 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 CEP128Q6ZU80 1094 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 RGL4Q8IZJ4 473 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 DEPDC4Q8N2C3 294 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 RNF214Q8ND24 703 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 WIPF2Q8TF74 440 aaPredicted RBP0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 FAM89AQ96GI7 184 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 NGLY1Q96IV0 654 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 MARK4Q96L34 752 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 CTAGE1Q96RT6 745 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 PLCD4Q9BRC7 762 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 LRFN3Q9BTN0 628 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 C2orf49Q9BVC5 232 aaPredicted RBP0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 TRIM34Q9BYJ4 488 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 SEC61A2Q9H9S3 476 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 PARPBPQ9NWS1 579 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 GPRC5BQ9NZH0 403 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 TPX2Q9ULW0 747 aaKnown RBP0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 PCDHA11Q9Y5I1 949 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 TENM3Q9P273 2699 aa0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 TESPA1A2RU30 521 aaPredicted RBP0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 C21orf2O43822 256 aa0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 BRINP1O60477 761 aa0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 SLITRK5O94991 958 aa0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 CBX7O95931 251 aa0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 CYP2E1P05181 493 aaPredicted RBP0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 ASGR2P07307 311 aa0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 USP17L8P0C7I0 530 aa0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 ACPPP15309 386 aa0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 LMNB1P20700 586 aa0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 THBS3P49746 956 aa0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 POU4F1Q01851 419 aa0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 KRTAP24-1Q3LI83 254 aa0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 SLFNL1Q499Z3 407 aa0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 C9orf50Q5SZB4 431 aa0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 TTC39BQ5VTQ0 682 aaPredicted RBP0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 POLNQ7Z5Q5 900 aa0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 MRGPREQ86SM8 312 aa0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 TSPYL5Q86VY4 417 aaPredicted RBP0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 VRK3Q8IV63 474 aa0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 KBTBD2Q8IY47 623 aa0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 MTMR14Q8NCE2 650 aa0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 SMARCC2Q8TAQ2 1214 aa0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 FRS2Q8WU20 508 aa0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 NXPE3Q969Y0 559 aa0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 EAF1Q96JC9 268 aaPredicted RBP0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 MAP6Q96JE9 813 aa0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 GNRHR2Q96P88 292 aa0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 BHLHE41Q9C0J9 482 aaPredicted RBP0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 DUSP15Q9H1R2 295 aaPredicted RBP0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 GPATCH2Q9NW75 528 aa0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 KLK14Q9P0G3 267 aa0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 RBPJLQ9UBG7 517 aa0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 SALL4Q9UJQ4 1053 aa0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 PLA2G2DQ9UNK4 145 aa0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 SLC30A1Q9Y6M5 507 aa0□□□□□ -2.41
RNU6-1238P-201ENST00000517215 TENM1Q9UKZ4 2725 aa-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 UBAP1LF5GYI3 381 aa-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 TP73O15350 636 aa-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 B3GALT2O43825 422 aa-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 ZNF862O60290 1169 aa-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 AP1G2O75843 785 aa-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 RAD17O75943 681 aa-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 LRIG2O94898 1065 aa-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 CNOT4O95628 575 aaKnown RBP-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 IGKV3-20P01619 116 aa-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 TYRP1P17643 537 aa-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 LIG1P18858 919 aa-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 MAPK8P45983 427 aa-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 CXCR3P49682 368 aa-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 ERVK-24P63145 666 aa-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 SRSF4Q08170 494 aaKnown RBP-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 SMAD4Q13485 552 aaKnown RBP-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 DGKZQ13574 1117 aa-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 PRR31Q5SQ13 230 aa-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 GALNT18Q6P9A2 607 aa-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 BNC2Q6ZN30 1099 aaPredicted RBP-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 ARMCX6Q7L4S7 300 aa-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 KRT77Q7Z794 578 aa-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 TMPRSS6Q8IU80 811 aa-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 FUKQ8N0W3 1084 aa-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 SH2D3CQ8N5H7 860 aa-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 GIMAP8Q8ND71 665 aaPredicted RBP-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 GAS2L2Q8NHY3 880 aa-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 DDX54Q8TDD1 881 aaKnown RBP-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 CPA5Q8WXQ8 436 aa-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 ZNF524Q96C55 264 aa-0.01□□□□□ -2.41
RNU6-1238P-201ENST00000517215 WDR89Q96FK6 387 aaPredicted RBP-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms