RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 MPHOSPH6Q99547 160 aaKnown RBP6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 SPZ1Q9BXG8 430 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 AMNQ9BXJ7 453 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 SLC26A6Q9BXS9 759 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 TEX13BQ9BXU2 312 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 AGXT2Q9BYV1 514 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 SPATC1LQ9H0A9 340 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 MROH8Q9H579 483 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 NCOA5Q9HCD5 579 aaKnown RBP6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 RAVER2Q9HCJ3 691 aaKnown RBP6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 TPCN1Q9ULQ1 816 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 MRPL11Q9Y3B7 192 aaKnown RBP6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 V9GY48 417 aaPredicted RBP6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 ABCB11O95342 1321 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 hCG_1984214I3L0E3 225 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 GPR25O00155 361 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 TNPO2O14787 897 aaKnown RBP6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 STRNO43815 780 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 PLEKHA8P1O95397 391 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 DEXIO95424 95 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 ICAM1P05362 532 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 FCER1AP12319 257 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 IFNAR1P17181 557 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 ADD1P35611 737 aaKnown RBP6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 NAPAP54920 295 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 EVCP57679 992 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 SNAP25P60880 206 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 ERVK-9P63128 1117 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 ERVK-24P63145 666 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 HMGN5P82970 282 aaKnown RBP6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 MOGSQ13724 837 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 SAFBQ15424 915 aaKnown RBP eCLIP6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 LBX2Q6XYB7 198 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 HEATR3Q7Z4Q2 680 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 PLEKHH3Q7Z736 793 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 DPP9Q86TI2 863 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 CCDC83Q8IWF9 413 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 CMTR1Q8N1G2 835 aaKnown RBP6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 SRBD1Q8N5C6 995 aaKnown RBP6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 DNAJC5GQ8N7S2 189 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 ZNF713Q8N859 430 aaPredicted RBP6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 NECAB1Q8N987 351 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 CHST13Q8NET6 341 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 CCDC148Q8NFR7 591 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 NKX2-3Q8TAU0 364 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 BICD2Q8TD16 824 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 TRERF1Q96PN7 1200 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 PIGSQ96S52 555 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 LLPHQ9BRT6 129 aaKnown RBP6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 GLT8D2Q9H1C3 349 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 RANBP17Q9H2T7 1088 aaKnown RBP6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 ACAD9Q9H845 621 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 EHMT1Q9H9B1 1298 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 JMJD4Q9H9V9 463 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 SLC38A10Q9HBR0 1119 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 BRMS1Q9HCU9 246 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 HOMER2Q9NSB8 354 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 WBP1LQ9NX94 342 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 MORF4L1Q9UBU8 362 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 SMC3Q9UQE7 1217 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 PCDHA1Q9Y5I3 950 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 MYH4Q9Y623 1939 aa6.29□□□□□ -1.4
SCARNA16.4-201ENST00000516956 PTPDC1A2A3K4 754 aa6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 K7ELQ4 463 aaPredicted RBP6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 PRPF3O43395 683 aaKnown RBP6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 GNRH1P01148 92 aa6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 HSPA1AP0DMV8 641 aaKnown RBP6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 HSPA1BP0DMV9 641 aaKnown RBP6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 CALML3P27482 149 aa6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 GNA11P29992 359 aa6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 PSMC4P43686 418 aa6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 NLRP5P59047 1200 aa6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 SCRN1Q12765 414 aa6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 TMEM132BQ14DG7 1078 aa6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 ME3Q16798 604 aa6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 QRICH1Q2TAL8 776 aa6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 MCTP2Q6DN12 878 aa6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 C17orf99Q6UX52 265 aa6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 NSMFQ6X4W1 530 aa6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 RIOX2Q8IUF8 465 aa6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 SHCBP1Q8NEM2 672 aa6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 SMARCC2Q8TAQ2 1214 aa6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 PHKBQ93100 1093 aa6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 GTF3C6Q969F1 213 aa6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 TMX3Q96JJ7 454 aa6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 AGBL1Q96MI9 1066 aa6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 MMP19Q99542 508 aa6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 KIF2CQ99661 725 aa6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 NUDT12Q9BQG2 462 aa6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 CFHR5Q9BXR6 569 aa6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 MOV10L1Q9BXT6 1211 aaKnown RBP6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 RNF26Q9BY78 433 aaPredicted RBP6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 CPVLQ9H3G5 476 aa6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 RIOX1Q9H6W3 641 aa6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 EFCC1Q9HA90 598 aa6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 C6orf50Q9HD87 102 aa6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 RNF146Q9NTX7 359 aa6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 ORC3Q9UBD5 711 aaPredicted RBP6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 RBPJLQ9UBG7 517 aa6.28□□□□□ -1.4
SCARNA16.4-201ENST00000516956 BIN2Q9UBW5 565 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms