RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 CYP7A1P22680 504 aa0.68□□□□□ -2.3
RNU6-542P-201ENST00000516405 THBS2P35442 1172 aa0.68□□□□□ -2.3
RNU6-542P-201ENST00000516405 NR1I3Q14994 352 aa0.68□□□□□ -2.3
RNU6-542P-201ENST00000516405 PKN3Q6P5Z2 889 aa0.68□□□□□ -2.3
RNU6-542P-201ENST00000516405 OLFML1Q6UWY5 402 aa0.68□□□□□ -2.3
RNU6-542P-201ENST00000516405 ZNF517Q6ZMY9 492 aaPredicted RBP0.68□□□□□ -2.3
RNU6-542P-201ENST00000516405 PLEKHM2Q8IWE5 1019 aa0.68□□□□□ -2.3
RNU6-542P-201ENST00000516405 MFSD2AQ8NA29 543 aa0.68□□□□□ -2.3
RNU6-542P-201ENST00000516405 STK35Q8TDR2 534 aa0.68□□□□□ -2.3
RNU6-542P-201ENST00000516405 GPBAR1Q8TDU6 330 aa0.68□□□□□ -2.3
RNU6-542P-201ENST00000516405 KCNB2Q92953 911 aa0.68□□□□□ -2.3
RNU6-542P-201ENST00000516405 VTI1AQ96AJ9 217 aa0.68□□□□□ -2.3
RNU6-542P-201ENST00000516405 MKRN1Q9UHC7 482 aaKnown RBP0.68□□□□□ -2.3
RNU6-542P-201ENST00000516405 ZMYM5Q9UJ78 669 aa0.68□□□□□ -2.3
RNU6-542P-201ENST00000516405 RBM19Q9Y4C8 960 aaKnown RBP0.68□□□□□ -2.3
RNU6-542P-201ENST00000516405 TP53BP1Q12888 1972 aaPredicted RBP0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 SHISA3A0PJX4 238 aa0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 USP17L3A6NCW0 530 aa0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 USP17L4A6NCW7 530 aa0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 C9orf118A6NHY6 69 aa0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 FADS2P1A8MWK0 482 aa0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 ZNF185O15231 689 aa0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 SMARCA5O60264 1052 aaPredicted RBP0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 B4GALT4O60513 344 aa0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 RHOBTB3O94955 611 aa0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 PRR5P85299 388 aa0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 ZNF628Q5EBL2 1059 aa0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 PRR31Q5SQ13 230 aa0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 STRIP1Q5VSL9 837 aa0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 ZNF425Q6IV72 752 aa0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 GALNT18Q6P9A2 607 aa0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 USP17L2Q6R6M4 530 aa0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 ZPBP2Q6X784 338 aa0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 Q6ZTC4 211 aa0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 USP17L1Q7RTZ2 530 aa0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 WAPLQ7Z5K2 1190 aa0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 ZSCAN29Q8IWY8 852 aaPredicted RBP0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 SRRM1Q8IYB3 904 aaKnown RBP0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 DTWD2Q8NBA8 298 aa0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 KCT2Q8NC54 265 aa0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 XAGE3Q8WTP9 111 aa0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 BCAS3Q9H6U6 928 aa0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 ZNF703Q9H7S9 590 aaPredicted RBP0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 CEP72Q9P209 647 aa0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 PACSIN3Q9UKS6 424 aa0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 ACSL6Q9UKU0 697 aa0.67□□□□□ -2.3
RNU6-542P-201ENST00000516405 SPATA31A6Q5VVP1 1343 aa0.66□□□□□ -2.3
RNU6-542P-201ENST00000516405 A0A1B0GVY2 172 aa0.66□□□□□ -2.3
RNU6-542P-201ENST00000516405 DBHP09172 617 aa0.66□□□□□ -2.3
RNU6-542P-201ENST00000516405 ACO1P21399 889 aaKnown RBP0.66□□□□□ -2.3
RNU6-542P-201ENST00000516405 COMTP21964 271 aa0.66□□□□□ -2.3
RNU6-542P-201ENST00000516405 ITPKAP23677 461 aa0.66□□□□□ -2.3
RNU6-542P-201ENST00000516405 TKTP29401 623 aaKnown RBP0.66□□□□□ -2.3
RNU6-542P-201ENST00000516405 PMLP29590 882 aa0.66□□□□□ -2.3
RNU6-542P-201ENST00000516405 CAP2P40123 477 aa0.66□□□□□ -2.3
RNU6-542P-201ENST00000516405 ABCG1P45844 678 aa0.66□□□□□ -2.3
RNU6-542P-201ENST00000516405 COL9A2Q14055 689 aaPredicted RBP0.66□□□□□ -2.3
RNU6-542P-201ENST00000516405 LCE3CQ5T5A8 94 aa0.66□□□□□ -2.3
RNU6-542P-201ENST00000516405 VRK3Q8IV63 474 aa0.66□□□□□ -2.3
RNU6-542P-201ENST00000516405 KBTBD2Q8IY47 623 aa0.66□□□□□ -2.3
RNU6-542P-201ENST00000516405 USHBP1Q8N6Y0 703 aa0.66□□□□□ -2.3
RNU6-542P-201ENST00000516405 BANK1Q8NDB2 785 aa0.66□□□□□ -2.3
RNU6-542P-201ENST00000516405 GORASP1Q9BQQ3 440 aa0.66□□□□□ -2.3
RNU6-542P-201ENST00000516405 WACQ9BTA9 647 aa0.66□□□□□ -2.3
RNU6-542P-201ENST00000516405 ZNF768Q9H5H4 540 aaKnown RBP0.66□□□□□ -2.3
RNU6-542P-201ENST00000516405 CACNA2D2Q9NY47 1150 aa0.66□□□□□ -2.3
RNU6-542P-201ENST00000516405 GPRC5BQ9NZH0 403 aa0.66□□□□□ -2.3
RNU6-542P-201ENST00000516405 CCDC187A0A096LP49 1063 aa0.65□□□□□ -2.31
RNU6-542P-201ENST00000516405 RBM47A0AV96 593 aaKnown RBP0.65□□□□□ -2.31
RNU6-542P-201ENST00000516405 WTIPA6NIX2 430 aaPredicted RBP0.65□□□□□ -2.31
RNU6-542P-201ENST00000516405 NTN3O00634 580 aaPredicted RBP0.65□□□□□ -2.31
RNU6-542P-201ENST00000516405 LRRN2O75325 713 aa0.65□□□□□ -2.31
RNU6-542P-201ENST00000516405 ACRV1P26436 265 aa0.65□□□□□ -2.31
RNU6-542P-201ENST00000516405 SOX11P35716 441 aa0.65□□□□□ -2.31
RNU6-542P-201ENST00000516405 FKBP5Q13451 457 aaPredicted RBP0.65□□□□□ -2.31
RNU6-542P-201ENST00000516405 FHL1Q13642 323 aa0.65□□□□□ -2.31
RNU6-542P-201ENST00000516405 DGKKQ5KSL6 1271 aa0.65□□□□□ -2.31
RNU6-542P-201ENST00000516405 MAP1SQ66K74 1059 aaPredicted RBP0.65□□□□□ -2.31
RNU6-542P-201ENST00000516405 FBXO42Q6P3S6 717 aa0.65□□□□□ -2.31
RNU6-542P-201ENST00000516405 ATCAYQ86WG3 371 aa0.65□□□□□ -2.31
RNU6-542P-201ENST00000516405 ZC3H7AQ8IWR0 971 aaKnown RBP0.65□□□□□ -2.31
RNU6-542P-201ENST00000516405 FUKQ8N0W3 1084 aa0.65□□□□□ -2.31
RNU6-542P-201ENST00000516405 NUP43Q8NFH3 380 aa0.65□□□□□ -2.31
RNU6-542P-201ENST00000516405 ZNF507Q8TCN5 953 aa0.65□□□□□ -2.31
RNU6-542P-201ENST00000516405 RGMAQ96B86 450 aa0.65□□□□□ -2.31
RNU6-542P-201ENST00000516405 C11orf84Q9BUA3 381 aaPredicted RBP0.65□□□□□ -2.31
RNU6-542P-201ENST00000516405 ALG2Q9H553 416 aa0.65□□□□□ -2.31
RNU6-542P-201ENST00000516405 LIN7BQ9HAP6 207 aa0.65□□□□□ -2.31
RNU6-542P-201ENST00000516405 PICK1Q9NRD5 415 aa0.65□□□□□ -2.31
RNU6-542P-201ENST00000516405 ZNF112Q9UJU3 913 aa0.65□□□□□ -2.31
RNU6-542P-201ENST00000516405 GPR55Q9Y2T6 319 aaPredicted RBP0.65□□□□□ -2.31
RNU6-542P-201ENST00000516405 TAF6LQ9Y6J9 622 aa0.65□□□□□ -2.31
RNU6-542P-201ENST00000516405 H3BNC9 293 aa0.64□□□□□ -2.31
RNU6-542P-201ENST00000516405 TNFRSF21O75509 655 aa0.64□□□□□ -2.31
RNU6-542P-201ENST00000516405 CNOT4O95628 575 aaKnown RBP0.64□□□□□ -2.31
RNU6-542P-201ENST00000516405 CYBBP04839 570 aa0.64□□□□□ -2.31
RNU6-542P-201ENST00000516405 POLR3DP05423 398 aaPredicted RBP0.64□□□□□ -2.31
RNU6-542P-201ENST00000516405 CACNB2Q08289 660 aaPredicted RBP0.64□□□□□ -2.31
RNU6-542P-201ENST00000516405 PRAMEF13Q5VWM6 474 aa0.64□□□□□ -2.31
RNU6-542P-201ENST00000516405 USPL1Q5W0Q7 1092 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms