RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 TTBK2Q6IQ55 1244 aa13.13□□□□□ -0.31
SCARNA16.1-201ENST00000516133 NECAB2Q7Z6G3 386 aa13.13□□□□□ -0.31
SCARNA16.1-201ENST00000516133 RALYLQ86SE5 291 aaKnown RBP13.13□□□□□ -0.31
SCARNA16.1-201ENST00000516133 NCOA7Q8NI08 942 aa13.13□□□□□ -0.31
SCARNA16.1-201ENST00000516133 AGBL1Q96MI9 1066 aa13.13□□□□□ -0.31
SCARNA16.1-201ENST00000516133 TINF2Q9BSI4 451 aa13.13□□□□□ -0.31
SCARNA16.1-201ENST00000516133 ACAD9Q9H845 621 aa13.13□□□□□ -0.31
SCARNA16.1-201ENST00000516133 NRBP1Q9UHY1 535 aa13.13□□□□□ -0.31
SCARNA16.1-201ENST00000516133 RBM8AQ9Y5S9 174 aaKnown RBP13.13□□□□□ -0.31
SCARNA16.1-201ENST00000516133 COL11A1P12107 1806 aaPredicted RBP13.13□□□□□ -0.31
SCARNA16.1-201ENST00000516133 ZNF536O15090 1300 aa13.13□□□□□ -0.31
SCARNA16.1-201ENST00000516133 FRMPD2Q68DX3 1309 aaPredicted RBP13.13□□□□□ -0.31
SCARNA16.1-201ENST00000516133 ZNFX1Q9P2E3 1918 aaKnown RBP13.12□□□□□ -0.31
SCARNA16.1-201ENST00000516133 ZNF236Q9UL36 1845 aa13.12□□□□□ -0.31
SCARNA16.1-201ENST00000516133 DNAJC25-GNG10A0A024R161 153 aa13.12□□□□□ -0.31
SCARNA16.1-201ENST00000516133 ERICH2A1L162 156 aa13.12□□□□□ -0.31
SCARNA16.1-201ENST00000516133 E7EWF7 191 aa13.12□□□□□ -0.31
SCARNA16.1-201ENST00000516133 ICAM1P05362 532 aa13.12□□□□□ -0.31
SCARNA16.1-201ENST00000516133 SART3Q15020 963 aaKnown RBP13.12□□□□□ -0.31
SCARNA16.1-201ENST00000516133 IFIT1BQ5T764 474 aaKnown RBP13.12□□□□□ -0.31
SCARNA16.1-201ENST00000516133 PRPF38BQ5VTL8 546 aaKnown RBP13.12□□□□□ -0.31
SCARNA16.1-201ENST00000516133 CCDC174Q6PII3 467 aa13.12□□□□□ -0.31
SCARNA16.1-201ENST00000516133 ZNF467Q7Z7K2 595 aaPredicted RBP13.12□□□□□ -0.31
SCARNA16.1-201ENST00000516133 SKAP1Q86WV1 359 aa13.12□□□□□ -0.31
SCARNA16.1-201ENST00000516133 PAWRQ96IZ0 340 aaKnown RBP13.12□□□□□ -0.31
SCARNA16.1-201ENST00000516133 TRERF1Q96PN7 1200 aa13.12□□□□□ -0.31
SCARNA16.1-201ENST00000516133 LSG1Q9H089 658 aaKnown RBP13.12□□□□□ -0.31
SCARNA16.1-201ENST00000516133 RANBP17Q9H2T7 1088 aaKnown RBP13.12□□□□□ -0.31
SCARNA16.1-201ENST00000516133 HOMER2Q9NSB8 354 aa13.12□□□□□ -0.31
SCARNA16.1-201ENST00000516133 RNF146Q9NTX7 359 aa13.12□□□□□ -0.31
SCARNA16.1-201ENST00000516133 DDX20Q9UHI6 824 aaKnown RBP13.12□□□□□ -0.31
SCARNA16.1-201ENST00000516133 LAMA4Q16363 1823 aa13.11□□□□□ -0.31
SCARNA16.1-201ENST00000516133 SEPT4O43236 478 aa13.11□□□□□ -0.31
SCARNA16.1-201ENST00000516133 CDC45O75419 566 aa13.11□□□□□ -0.31
SCARNA16.1-201ENST00000516133 ALAS1P13196 640 aa13.11□□□□□ -0.31
SCARNA16.1-201ENST00000516133 CYBAP13498 195 aa13.11□□□□□ -0.31
SCARNA16.1-201ENST00000516133 ASPRV1Q53RT3 343 aa13.11□□□□□ -0.31
SCARNA16.1-201ENST00000516133 CYB5R4Q7L1T6 521 aa13.11□□□□□ -0.31
SCARNA16.1-201ENST00000516133 RASGRP2Q7LDG7 609 aa13.11□□□□□ -0.31
SCARNA16.1-201ENST00000516133 TRPV1Q8NER1 839 aa13.11□□□□□ -0.31
SCARNA16.1-201ENST00000516133 DPF3Q92784 378 aa13.11□□□□□ -0.31
SCARNA16.1-201ENST00000516133 ANO2Q9NQ90 1003 aa13.11□□□□□ -0.31
SCARNA16.1-201ENST00000516133 PPP4R2Q9NY27 417 aa13.11□□□□□ -0.31
SCARNA16.1-201ENST00000516133 CCPG1Q9ULG6 757 aa13.11□□□□□ -0.31
SCARNA16.1-201ENST00000516133 CNPY2Q9Y2B0 182 aa13.11□□□□□ -0.31
SCARNA16.1-201ENST00000516133 PFASO15067 1338 aa13.11□□□□□ -0.31
SCARNA16.1-201ENST00000516133 POTEB2H3BUK9 544 aa13.1□□□□□ -0.31
SCARNA16.1-201ENST00000516133 IFIT3O14879 490 aaKnown RBP13.1□□□□□ -0.31
SCARNA16.1-201ENST00000516133 PARP1P09874 1014 aaKnown RBP13.1□□□□□ -0.31
SCARNA16.1-201ENST00000516133 SNAP25P60880 206 aa13.1□□□□□ -0.31
SCARNA16.1-201ENST00000516133 SEC23AQ15436 765 aa13.1□□□□□ -0.31
SCARNA16.1-201ENST00000516133 RNF20Q5VTR2 975 aa13.1□□□□□ -0.31
SCARNA16.1-201ENST00000516133 MAMDC4Q6UXC1 1216 aa13.1□□□□□ -0.31
SCARNA16.1-201ENST00000516133 ARRDC4Q8NCT1 418 aa13.1□□□□□ -0.31
SCARNA16.1-201ENST00000516133 MTA3Q9BTC8 594 aa13.1□□□□□ -0.31
SCARNA16.1-201ENST00000516133 SYNGAP1Q96PV0 1343 aa13.1□□□□□ -0.31
SCARNA16.1-201ENST00000516133 GOLGA8HP0CJ92 632 aa13.09□□□□□ -0.31
SCARNA16.1-201ENST00000516133 NECTIN1Q15223 517 aa13.09□□□□□ -0.31
SCARNA16.1-201ENST00000516133 PRAMEF19Q5SWL8 479 aa13.09□□□□□ -0.31
SCARNA16.1-201ENST00000516133 UBA5Q9GZZ9 404 aa13.09□□□□□ -0.31
SCARNA16.1-201ENST00000516133 A1CFQ9NQ94 594 aaKnown RBP13.09□□□□□ -0.31
SCARNA16.1-201ENST00000516133 NR2E3Q9Y5X4 410 aa13.09□□□□□ -0.31
SCARNA16.1-201ENST00000516133 TAF6LQ9Y6J9 622 aa13.09□□□□□ -0.31
SCARNA16.1-201ENST00000516133 WDR19Q8NEZ3 1342 aa13.09□□□□□ -0.31
SCARNA16.1-201ENST00000516133 SLC27A2O14975 620 aa13.08□□□□□ -0.32
SCARNA16.1-201ENST00000516133 MCM5P33992 734 aa13.08□□□□□ -0.32
SCARNA16.1-201ENST00000516133 MNX1P50219 401 aaPredicted RBP13.08□□□□□ -0.32
SCARNA16.1-201ENST00000516133 WTAPQ15007 396 aa13.08□□□□□ -0.32
SCARNA16.1-201ENST00000516133 TMEM67Q5HYA8 995 aa13.08□□□□□ -0.32
SCARNA16.1-201ENST00000516133 CREB3L3Q68CJ9 461 aa13.08□□□□□ -0.32
SCARNA16.1-201ENST00000516133 STOX1Q6ZVD7 989 aa13.08□□□□□ -0.32
SCARNA16.1-201ENST00000516133 TMTC2Q8N394 836 aa13.08□□□□□ -0.32
SCARNA16.1-201ENST00000516133 FAM133AQ8N9E0 248 aa13.08□□□□□ -0.32
SCARNA16.1-201ENST00000516133 MAF1Q9H063 256 aa13.08□□□□□ -0.32
SCARNA16.1-201ENST00000516133 C11orf49Q9H6J7 331 aa13.08□□□□□ -0.32
SCARNA16.1-201ENST00000516133 CYP39A1Q9NYL5 469 aa13.08□□□□□ -0.32
SCARNA16.1-201ENST00000516133 ASB14A6NK59 587 aa13.07□□□□□ -0.32
SCARNA16.1-201ENST00000516133 KLRF2D3W0D1 207 aa13.07□□□□□ -0.32
SCARNA16.1-201ENST00000516133 DNM1LO00429 736 aa13.07□□□□□ -0.32
SCARNA16.1-201ENST00000516133 SNAI1O95863 264 aaPredicted RBP13.07□□□□□ -0.32
SCARNA16.1-201ENST00000516133 RARBP10826 455 aa13.07□□□□□ -0.32
SCARNA16.1-201ENST00000516133 CNTN2Q02246 1040 aa13.07□□□□□ -0.32
SCARNA16.1-201ENST00000516133 MUM1L1Q5H9M0 696 aa13.07□□□□□ -0.32
SCARNA16.1-201ENST00000516133 NSMFQ6X4W1 530 aa13.07□□□□□ -0.32
SCARNA16.1-201ENST00000516133 CHST3Q7LGC8 479 aa13.07□□□□□ -0.32
SCARNA16.1-201ENST00000516133 CATIPQ7Z7H3 387 aa13.07□□□□□ -0.32
SCARNA16.1-201ENST00000516133 MB21D2Q8IYB1 491 aaPredicted RBP13.07□□□□□ -0.32
SCARNA16.1-201ENST00000516133 ADGRF4Q8IZF3 695 aa13.07□□□□□ -0.32
SCARNA16.1-201ENST00000516133 IGDCC4Q8TDY8 1250 aa13.07□□□□□ -0.32
SCARNA16.1-201ENST00000516133 DIS3LQ8TF46 1054 aaKnown RBP13.07□□□□□ -0.32
SCARNA16.1-201ENST00000516133 ABHD16BQ9H3Z7 469 aa13.07□□□□□ -0.32
SCARNA16.1-201ENST00000516133 FAM184BQ9ULE4 1060 aa13.07□□□□□ -0.32
SCARNA16.1-201ENST00000516133 PALM3A6NDB9 673 aaPredicted RBP13.06□□□□□ -0.32
SCARNA16.1-201ENST00000516133 DHX16O60231 1041 aaKnown RBP13.06□□□□□ -0.32
SCARNA16.1-201ENST00000516133 EVI5O60447 810 aa13.06□□□□□ -0.32
SCARNA16.1-201ENST00000516133 ZNF865P0CJ78 1059 aaPredicted RBP13.06□□□□□ -0.32
SCARNA16.1-201ENST00000516133 COL6A1P12109 1028 aa13.06□□□□□ -0.32
SCARNA16.1-201ENST00000516133 AKR1A1P14550 325 aa13.06□□□□□ -0.32
SCARNA16.1-201ENST00000516133 TAL1P17542 331 aaPredicted RBP13.06□□□□□ -0.32
SCARNA16.1-201ENST00000516133 TROAPQ12815 778 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms