RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 ADAM7Q9H2U9 754 aa5.45□□□□□ -1.54
HERC4-215ENST00000515753 ANTXR1Q9H6X2 564 aa5.45□□□□□ -1.54
HERC4-215ENST00000515753 CHST7Q9NS84 486 aa5.45□□□□□ -1.54
HERC4-215ENST00000515753 GFOD1Q9NXC2 390 aa5.45□□□□□ -1.54
HERC4-215ENST00000515753 TNFRSF10DQ9UBN6 386 aa5.45□□□□□ -1.54
HERC4-215ENST00000515753 TAF6LQ9Y6J9 622 aa5.45□□□□□ -1.54
HERC4-215ENST00000515753 CLEC3AO75596 197 aa5.44□□□□□ -1.54
HERC4-215ENST00000515753 KRTAP10-2P60368 255 aa5.44□□□□□ -1.54
HERC4-215ENST00000515753 RACK1P63244 317 aaKnown RBP5.44□□□□□ -1.54
HERC4-215ENST00000515753 APOBRQ0VD83 1088 aa5.44□□□□□ -1.54
HERC4-215ENST00000515753 ZNF394Q53GI3 561 aa5.44□□□□□ -1.54
HERC4-215ENST00000515753 GK5Q6ZS86 529 aa5.44□□□□□ -1.54
HERC4-215ENST00000515753 ZNF654Q8IZM8 581 aa5.44□□□□□ -1.54
HERC4-215ENST00000515753 NUP43Q8NFH3 380 aa5.44□□□□□ -1.54
HERC4-215ENST00000515753 CXorf38Q8TB03 319 aa5.44□□□□□ -1.54
HERC4-215ENST00000515753 EAF1Q96JC9 268 aaPredicted RBP5.44□□□□□ -1.54
HERC4-215ENST00000515753 SPATA32Q96LK8 384 aa5.44□□□□□ -1.54
HERC4-215ENST00000515753 PWWP2AQ96N64 755 aa5.44□□□□□ -1.54
HERC4-215ENST00000515753 ERVK13-1Q9NX77 482 aa5.44□□□□□ -1.54
HERC4-215ENST00000515753 UBP1Q9NZI7 540 aa5.44□□□□□ -1.54
HERC4-215ENST00000515753 FBXL21Q9UKT6 434 aa5.44□□□□□ -1.54
HERC4-215ENST00000515753 WTIPA6NIX2 430 aaPredicted RBP5.43□□□□□ -1.54
HERC4-215ENST00000515753 ABLIM1O14639 778 aa5.43□□□□□ -1.54
HERC4-215ENST00000515753 ARL4AP40617 200 aa5.43□□□□□ -1.54
HERC4-215ENST00000515753 CTSKP43235 329 aa5.43□□□□□ -1.54
HERC4-215ENST00000515753 CEBPAP49715 358 aaPredicted RBP5.43□□□□□ -1.54
HERC4-215ENST00000515753 ZNF165P49910 485 aa5.43□□□□□ -1.54
HERC4-215ENST00000515753 CYP4F8P98187 520 aa5.43□□□□□ -1.54
HERC4-215ENST00000515753 CLCQ05315 142 aa5.43□□□□□ -1.54
HERC4-215ENST00000515753 COL9A2Q14055 689 aaPredicted RBP5.43□□□□□ -1.54
HERC4-215ENST00000515753 CDCP2Q5VXM1 449 aa5.43□□□□□ -1.54
HERC4-215ENST00000515753 OLFML2BQ68BL8 750 aa5.43□□□□□ -1.54
HERC4-215ENST00000515753 NLRC3Q7RTR2 1065 aa5.43□□□□□ -1.54
HERC4-215ENST00000515753 SLCO6A1Q86UG4 719 aa5.43□□□□□ -1.54
HERC4-215ENST00000515753 TMEM192Q8IY95 271 aa5.43□□□□□ -1.54
HERC4-215ENST00000515753 RASGRP4Q8TDF6 673 aa5.43□□□□□ -1.54
HERC4-215ENST00000515753 MKRN2Q9H000 416 aaKnown RBP5.43□□□□□ -1.54
HERC4-215ENST00000515753 CNNM2Q9H8M5 875 aa5.43□□□□□ -1.54
HERC4-215ENST00000515753 AP5S1Q9NUS5 200 aa5.43□□□□□ -1.54
HERC4-215ENST00000515753 PODXL2Q9NZ53 605 aa5.43□□□□□ -1.54
HERC4-215ENST00000515753 PCDHGB7Q9Y5F8 929 aa5.43□□□□□ -1.54
HERC4-215ENST00000515753 FAM86C2PA6NEL3 165 aa5.42□□□□□ -1.54
HERC4-215ENST00000515753 BUB1BO60566 1050 aaPredicted RBP5.42□□□□□ -1.54
HERC4-215ENST00000515753 CELA3BP08861 270 aa5.42□□□□□ -1.54
HERC4-215ENST00000515753 IMPDH2P12268 514 aa5.42□□□□□ -1.54
HERC4-215ENST00000515753 MCM4P33991 863 aa5.42□□□□□ -1.54
HERC4-215ENST00000515753 GJA8P48165 433 aa5.42□□□□□ -1.54
HERC4-215ENST00000515753 RAD51AP2Q09MP3 1159 aa5.42□□□□□ -1.54
HERC4-215ENST00000515753 SEZ6Q53EL9 994 aa5.42□□□□□ -1.54
HERC4-215ENST00000515753 CRTC3Q6UUV7 619 aa5.42□□□□□ -1.54
HERC4-215ENST00000515753 GGNQ86UU5 652 aa5.42□□□□□ -1.54
HERC4-215ENST00000515753 NT5DC4Q86YG4 428 aa5.42□□□□□ -1.54
HERC4-215ENST00000515753 NKD1Q969G9 470 aa5.42□□□□□ -1.54
HERC4-215ENST00000515753 SLC6A18Q96N87 628 aa5.42□□□□□ -1.54
HERC4-215ENST00000515753 JMJD8Q96S16 334 aa5.42□□□□□ -1.54
HERC4-215ENST00000515753 TGIF2Q9GZN2 237 aa5.42□□□□□ -1.54
HERC4-215ENST00000515753 IMPACTQ9P2X3 320 aa5.42□□□□□ -1.54
HERC4-215ENST00000515753 ZNRF3Q9ULT6 936 aa5.42□□□□□ -1.54
HERC4-215ENST00000515753 PCDHA5Q9Y5H7 936 aa5.42□□□□□ -1.54
HERC4-215ENST00000515753 VAV1P15498 845 aa5.41□□□□□ -1.54
HERC4-215ENST00000515753 CCNFP41002 786 aa5.41□□□□□ -1.54
HERC4-215ENST00000515753 LIMS1P48059 325 aa5.41□□□□□ -1.54
HERC4-215ENST00000515753 LAPTM5Q13571 262 aa5.41□□□□□ -1.54
HERC4-215ENST00000515753 LRRFIP1Q32MZ4 808 aaKnown RBP5.41□□□□□ -1.54
HERC4-215ENST00000515753 RPTNQ6XPR3 784 aa5.41□□□□□ -1.54
HERC4-215ENST00000515753 DBX2Q6ZNG2 339 aa5.41□□□□□ -1.54
HERC4-215ENST00000515753 SP8Q8IXZ3 490 aa5.41□□□□□ -1.54
HERC4-215ENST00000515753 TAB3Q8N5C8 712 aaPredicted RBP5.41□□□□□ -1.54
HERC4-215ENST00000515753 TP53I13Q8NBR0 393 aaPredicted RBP5.41□□□□□ -1.54
HERC4-215ENST00000515753 TMEM52Q8NDY8 209 aa5.41□□□□□ -1.54
HERC4-215ENST00000515753 TNFRSF12AQ9NP84 129 aa5.41□□□□□ -1.54
HERC4-215ENST00000515753 PCDHB12Q9Y5F1 795 aa5.41□□□□□ -1.54
HERC4-215ENST00000515753 TNFRSF10CO14798 259 aa5.4□□□□□ -1.54
HERC4-215ENST00000515753 ZNF205O95201 554 aa5.4□□□□□ -1.54
HERC4-215ENST00000515753 MSL3P1P0C860 447 aa5.4□□□□□ -1.54
HERC4-215ENST00000515753 NME1P15531 152 aaKnown RBP5.4□□□□□ -1.54
HERC4-215ENST00000515753 BMP8BP34820 402 aa5.4□□□□□ -1.54
HERC4-215ENST00000515753 ZNF200P98182 395 aaPredicted RBP5.4□□□□□ -1.54
HERC4-215ENST00000515753 NFKB2Q00653 900 aa5.4□□□□□ -1.54
HERC4-215ENST00000515753 LINC01356Q8N9X3 169 aa5.4□□□□□ -1.54
HERC4-215ENST00000515753 RBBP8NLQ8NC74 664 aaPredicted RBP5.4□□□□□ -1.54
HERC4-215ENST00000515753 ACSL6Q9UKU0 697 aa5.4□□□□□ -1.54
HERC4-215ENST00000515753 HCFC2Q9Y5Z7 792 aa5.4□□□□□ -1.54
HERC4-215ENST00000515753 A0A1W2PQ45 241 aaPredicted RBP5.39□□□□□ -1.55
HERC4-215ENST00000515753 A0A1W2PQY0 241 aa5.39□□□□□ -1.55
HERC4-215ENST00000515753 TCF3P15923 654 aa5.39□□□□□ -1.55
HERC4-215ENST00000515753 SOX9P48436 509 aa5.39□□□□□ -1.55
HERC4-215ENST00000515753 TMEM62Q0P6H9 643 aa5.39□□□□□ -1.55
HERC4-215ENST00000515753 AUHQ13825 339 aaKnown RBP5.39□□□□□ -1.55
HERC4-215ENST00000515753 PLEKHN1Q494U1 663 aaPredicted RBP5.39□□□□□ -1.55
HERC4-215ENST00000515753 ADGRG2Q8IZP9 1017 aa5.39□□□□□ -1.55
HERC4-215ENST00000515753 SLC9A7Q96T83 725 aa5.39□□□□□ -1.55
HERC4-215ENST00000515753 LUC7LQ9NQ29 371 aaKnown RBP5.39□□□□□ -1.55
HERC4-215ENST00000515753 IGSF5Q9NSI5 407 aa5.39□□□□□ -1.55
HERC4-215ENST00000515753 PLA2G2DQ9UNK4 145 aa5.39□□□□□ -1.55
HERC4-215ENST00000515753 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.39□□□□□ -1.55
HERC4-215ENST00000515753 A0A1W2PQ27 194 aa5.38□□□□□ -1.55
HERC4-215ENST00000515753 A0A1W2PQ64 194 aa5.38□□□□□ -1.55
HERC4-215ENST00000515753 A0A1W2PQC6 194 aa5.38□□□□□ -1.55
HERC4-215ENST00000515753 A0A1W2PQD8 194 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms