RNA–Protein interactions for RNA: ENST00000515499.5

TRIM41-208, Transcript of tripartite motif containing 41, humanhuman

TSL 3

Gene TRIM41, Length 914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-208ENST00000515499 SNAP25P60880 206 aa24.22■■□□□ 1.47
TRIM41-208ENST00000515499 CCDC174Q6PII3 467 aa24.22■■□□□ 1.47
TRIM41-208ENST00000515499 GPR142Q7Z601 462 aa24.22■■□□□ 1.47
TRIM41-208ENST00000515499 NCAPG2Q86XI2 1143 aa24.22■■□□□ 1.47
TRIM41-208ENST00000515499 JMJD4Q9H9V9 463 aa24.22■■□□□ 1.47
TRIM41-208ENST00000515499 CWC22Q9HCG8 908 aaKnown RBP24.22■■□□□ 1.47
TRIM41-208ENST00000515499 SRRDQ9UH36 339 aa24.22■■□□□ 1.47
TRIM41-208ENST00000515499 PNMA2Q9UL42 364 aa24.22■■□□□ 1.47
TRIM41-208ENST00000515499 DHX16O60231 1041 aaKnown RBP24.21■■□□□ 1.47
TRIM41-208ENST00000515499 ICAM1P05362 532 aa24.21■■□□□ 1.47
TRIM41-208ENST00000515499 RXRAP19793 462 aa24.21■■□□□ 1.47
TRIM41-208ENST00000515499 PKN2Q16513 984 aaKnown RBP24.21■■□□□ 1.47
TRIM41-208ENST00000515499 WDR78Q5VTH9 848 aa24.21■■□□□ 1.47
TRIM41-208ENST00000515499 RAB11FIP4Q86YS3 637 aa24.21■■□□□ 1.47
TRIM41-208ENST00000515499 RIOX1Q9H6W3 641 aa24.21■■□□□ 1.47
TRIM41-208ENST00000515499 VAT1LQ9HCJ6 419 aa24.21■■□□□ 1.47
TRIM41-208ENST00000515499 STRNO43815 780 aa24.2■■□□□ 1.46
TRIM41-208ENST00000515499 PPP2R5BQ15173 497 aa24.2■■□□□ 1.46
TRIM41-208ENST00000515499 TKFCQ3LXA3 575 aa24.2■■□□□ 1.46
TRIM41-208ENST00000515499 CCDC144CPQ8IYA2 1237 aa24.2■■□□□ 1.46
TRIM41-208ENST00000515499 MTMR8Q96EF0 704 aa24.2■■□□□ 1.46
TRIM41-208ENST00000515499 AGBL1Q96MI9 1066 aa24.2■■□□□ 1.46
TRIM41-208ENST00000515499 KIF2CQ99661 725 aa24.2■■□□□ 1.46
TRIM41-208ENST00000515499 RBM28Q9NW13 759 aaKnown RBP24.2■■□□□ 1.46
TRIM41-208ENST00000515499 NAP1L2Q9ULW6 460 aaPredicted RBP24.2■■□□□ 1.46
TRIM41-208ENST00000515499 RIPK3Q9Y572 518 aa24.2■■□□□ 1.46
TRIM41-208ENST00000515499 PTPREP23469 700 aa24.19■■□□□ 1.46
TRIM41-208ENST00000515499 NEK4P51957 841 aa24.19■■□□□ 1.46
TRIM41-208ENST00000515499 ANKRD1Q15327 319 aa24.19■■□□□ 1.46
TRIM41-208ENST00000515499 CDC37Q16543 378 aaPredicted RBP24.19■■□□□ 1.46
TRIM41-208ENST00000515499 RTN1Q16799 776 aa24.19■■□□□ 1.46
TRIM41-208ENST00000515499 NBPF11Q86T75 865 aa24.19■■□□□ 1.46
TRIM41-208ENST00000515499 SPZ1Q9BXG8 430 aa24.19■■□□□ 1.46
TRIM41-208ENST00000515499 GJD2Q9UKL4 321 aa24.19■■□□□ 1.46
TRIM41-208ENST00000515499 CCPG1Q9ULG6 757 aa24.19■■□□□ 1.46
TRIM41-208ENST00000515499 PTPN22Q9Y2R2 807 aa24.19■■□□□ 1.46
TRIM41-208ENST00000515499 IVNS1ABPQ9Y6Y0 642 aa24.19■■□□□ 1.46
TRIM41-208ENST00000515499 DOCK3Q8IZD9 2030 aa24.18■■□□□ 1.46
TRIM41-208ENST00000515499 SLC15A5A6NIM6 579 aa24.18■■□□□ 1.46
TRIM41-208ENST00000515499 GOLGA8AA7E2F4 631 aa24.18■■□□□ 1.46
TRIM41-208ENST00000515499 GOLGA8BA8MQT2 603 aa24.18■■□□□ 1.46
TRIM41-208ENST00000515499 CYTH3O43739 400 aa24.18■■□□□ 1.46
TRIM41-208ENST00000515499 SLC4A3P48751 1232 aa24.18■■□□□ 1.46
TRIM41-208ENST00000515499 SLC35G1Q2M3R5 365 aa24.18■■□□□ 1.46
TRIM41-208ENST00000515499 ABRAQ8N0Z2 381 aa24.18■■□□□ 1.46
TRIM41-208ENST00000515499 CHST13Q8NET6 341 aa24.18■■□□□ 1.46
TRIM41-208ENST00000515499 ZNF274Q96GC6 653 aaPredicted RBP24.18■■□□□ 1.46
TRIM41-208ENST00000515499 TBC1D32Q96NH3 1257 aa24.18■■□□□ 1.46
TRIM41-208ENST00000515499 NUDT12Q9BQG2 462 aa24.18■■□□□ 1.46
TRIM41-208ENST00000515499 FBXO40Q9UH90 709 aa24.18■■□□□ 1.46
TRIM41-208ENST00000515499 HPS5Q9UPZ3 1129 aa24.18■■□□□ 1.46
TRIM41-208ENST00000515499 NID2Q14112 1375 aa24.17■■□□□ 1.46
TRIM41-208ENST00000515499 CCDC196A0A1B0GTZ2 297 aa24.17■■□□□ 1.46
TRIM41-208ENST00000515499 PDIA3P30101 505 aaKnown RBP24.17■■□□□ 1.46
TRIM41-208ENST00000515499 FLT3LGP49771 235 aa24.17■■□□□ 1.46
TRIM41-208ENST00000515499 METAP2P50579 478 aaKnown RBP eCLIP24.17■■□□□ 1.46
TRIM41-208ENST00000515499 PRKCZQ05513 592 aa24.17■■□□□ 1.46
TRIM41-208ENST00000515499 QRICH1Q2TAL8 776 aa24.17■■□□□ 1.46
TRIM41-208ENST00000515499 MORN1Q5T089 497 aa24.17■■□□□ 1.46
TRIM41-208ENST00000515499 COL13A1Q5TAT6 717 aaPredicted RBP24.17■■□□□ 1.46
TRIM41-208ENST00000515499 FBXO46Q6PJ61 603 aaPredicted RBP24.17■■□□□ 1.46
TRIM41-208ENST00000515499 TMTC3Q6ZXV5 915 aa24.17■■□□□ 1.46
TRIM41-208ENST00000515499 SRBD1Q8N5C6 995 aaKnown RBP24.17■■□□□ 1.46
TRIM41-208ENST00000515499 SOCS4Q8WXH5 440 aa24.17■■□□□ 1.46
TRIM41-208ENST00000515499 GABRQQ9UN88 632 aa24.17■■□□□ 1.46
TRIM41-208ENST00000515499 ZBTB5O15062 677 aa24.16■■□□□ 1.46
TRIM41-208ENST00000515499 PLEKHA8P1O95397 391 aa24.16■■□□□ 1.46
TRIM41-208ENST00000515499 FCER1AP12319 257 aa24.16■■□□□ 1.46
TRIM41-208ENST00000515499 ALAS1P13196 640 aa24.16■■□□□ 1.46
TRIM41-208ENST00000515499 GRB14Q14449 540 aa24.16■■□□□ 1.46
TRIM41-208ENST00000515499 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.16■■□□□ 1.461e-7■■□□□ 12.1
TRIM41-208ENST00000515499 USP6NLQ92738 828 aa24.16■■□□□ 1.46
TRIM41-208ENST00000515499 TRERF1Q96PN7 1200 aa24.16■■□□□ 1.46
TRIM41-208ENST00000515499 FAM217BQ9NTX9 383 aaPredicted RBP24.16■■□□□ 1.46
TRIM41-208ENST00000515499 AK2P54819 239 aa24.15■■□□□ 1.46
TRIM41-208ENST00000515499 IRF5Q13568 498 aa24.15■■□□□ 1.46
TRIM41-208ENST00000515499 IL27Q8NEV9 243 aa24.15■■□□□ 1.46
TRIM41-208ENST00000515499 RAET1EQ8TD07 263 aa24.15■■□□□ 1.46
TRIM41-208ENST00000515499 PIGSQ96S52 555 aa24.15■■□□□ 1.46
TRIM41-208ENST00000515499 MMP19Q99542 508 aa24.15■■□□□ 1.46
TRIM41-208ENST00000515499 ACAD9Q9H845 621 aa24.15■■□□□ 1.46
TRIM41-208ENST00000515499 RNF146Q9NTX7 359 aa24.15■■□□□ 1.46
TRIM41-208ENST00000515499 PNMA6FA0A0J9YX94 578 aa24.14■■□□□ 1.45
TRIM41-208ENST00000515499 CDC27P30260 824 aa24.14■■□□□ 1.45
TRIM41-208ENST00000515499 TRAF1Q13077 416 aa24.14■■□□□ 1.45
TRIM41-208ENST00000515499 MAP2K5Q13163 448 aa24.14■■□□□ 1.45
TRIM41-208ENST00000515499 KCTD2Q14681 263 aa24.14■■□□□ 1.45
TRIM41-208ENST00000515499 FBXO11Q86XK2 927 aa24.14■■□□□ 1.45
TRIM41-208ENST00000515499 CMTR1Q8N1G2 835 aaKnown RBP24.14■■□□□ 1.45
TRIM41-208ENST00000515499 RRP36Q96EU6 259 aaKnown RBP24.14■■□□□ 1.45
TRIM41-208ENST00000515499 LARP6Q9BRS8 491 aaKnown RBP24.14■■□□□ 1.45
TRIM41-208ENST00000515499 AMNQ9BXJ7 453 aa24.14■■□□□ 1.45
TRIM41-208ENST00000515499 MCOLN1Q9GZU1 580 aa24.14■■□□□ 1.45
TRIM41-208ENST00000515499 HOMER2Q9NSB8 354 aa24.14■■□□□ 1.45
TRIM41-208ENST00000515499 PLXNB2O15031 1838 aa24.14■■□□□ 1.45
TRIM41-208ENST00000515499 BAZ2BQ9UIF8 2168 aaKnown RBP24.13■■□□□ 1.45
TRIM41-208ENST00000515499 XRCC5P13010 732 aaKnown RBP24.13■■□□□ 1.45
TRIM41-208ENST00000515499 ADORA2AP29274 412 aa24.13■■□□□ 1.45
TRIM41-208ENST00000515499 ADD1P35611 737 aaKnown RBP24.13■■□□□ 1.45
TRIM41-208ENST00000515499 RGS2P41220 211 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms