RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 IRX5P78411 483 aaPredicted RBP27.27■■□□□ 1.96
SMAD1-214ENST00000514831 CCDC144BQ3MJ40 725 aa27.27■■□□□ 1.96
SMAD1-214ENST00000514831 ARMCX2Q7L311 632 aa27.27■■□□□ 1.96
SMAD1-214ENST00000514831 GMCL1P1Q8NEA9 526 aa27.27■■□□□ 1.96
SMAD1-214ENST00000514831 MTMR4Q9NYA4 1195 aa27.27■■□□□ 1.96
SMAD1-214ENST00000514831 A0A0U1RQG5 324 aaPredicted RBP27.26■■□□□ 1.95
SMAD1-214ENST00000514831 GNAT2P19087 354 aa27.26■■□□□ 1.95
SMAD1-214ENST00000514831 TDO2P48775 406 aa27.26■■□□□ 1.95
SMAD1-214ENST00000514831 PPIGQ13427 754 aaKnown RBP eCLIP27.26■■□□□ 1.95
SMAD1-214ENST00000514831 CCDC174Q6PII3 467 aa27.26■■□□□ 1.95
SMAD1-214ENST00000514831 ZNF444Q8N0Y2 327 aaPredicted RBP27.26■■□□□ 1.95
SMAD1-214ENST00000514831 TIFAQ96CG3 184 aa27.26■■□□□ 1.95
SMAD1-214ENST00000514831 ZNF576Q9H609 170 aa27.26■■□□□ 1.95
SMAD1-214ENST00000514831 RNF113AO15541 343 aaKnown RBP27.25■■□□□ 1.95
SMAD1-214ENST00000514831 TTLL1O95922 423 aa27.25■■□□□ 1.95
SMAD1-214ENST00000514831 ZFYP08048 801 aaPredicted RBP27.25■■□□□ 1.95
SMAD1-214ENST00000514831 LRRC47Q8N1G4 583 aaKnown RBP27.25■■□□□ 1.95
SMAD1-214ENST00000514831 SYMPKQ92797 1274 aaKnown RBP27.25■■□□□ 1.95
SMAD1-214ENST00000514831 KATNBL1Q9H079 304 aa27.25■■□□□ 1.95
SMAD1-214ENST00000514831 ARVCFO00192 962 aa27.24■■□□□ 1.95
SMAD1-214ENST00000514831 PRDM1O75626 825 aa27.24■■□□□ 1.95
SMAD1-214ENST00000514831 NKX3-2P78367 333 aa27.24■■□□□ 1.95
SMAD1-214ENST00000514831 RASIP1Q5U651 963 aa27.24■■□□□ 1.95
SMAD1-214ENST00000514831 FAM126BQ8IXS8 530 aa27.24■■□□□ 1.95
SMAD1-214ENST00000514831 GPATCH3Q96I76 525 aa27.24■■□□□ 1.95
SMAD1-214ENST00000514831 TTC28Q96AY4 2481 aa27.24■■□□□ 1.95
SMAD1-214ENST00000514831 FDX1P10109 184 aa27.23■■□□□ 1.95
SMAD1-214ENST00000514831 TMEM240Q5SV17 173 aa27.23■■□□□ 1.95
SMAD1-214ENST00000514831 CCDC144CPQ8IYA2 1237 aa27.23■■□□□ 1.95
SMAD1-214ENST00000514831 USP38Q8NB14 1042 aa27.23■■□□□ 1.95
SMAD1-214ENST00000514831 M0R2C6 588 aa27.22■■□□□ 1.95
SMAD1-214ENST00000514831 CTAGE5O15320 804 aa27.22■■□□□ 1.95
SMAD1-214ENST00000514831 BMP3P12645 472 aa27.22■■□□□ 1.95
SMAD1-214ENST00000514831 GNASQ5JWF2 1037 aa27.22■■□□□ 1.95
SMAD1-214ENST00000514831 PSRC1Q6PGN9 363 aaPredicted RBP27.22■■□□□ 1.95
SMAD1-214ENST00000514831 C16orf59Q7L2K0 433 aa27.22■■□□□ 1.95
SMAD1-214ENST00000514831 TMEM199Q8N511 208 aa27.22■■□□□ 1.95
SMAD1-214ENST00000514831 VTI1AQ96AJ9 217 aa27.22■■□□□ 1.95
SMAD1-214ENST00000514831 TLR3O15455 904 aaKnown RBP27.21■■□□□ 1.95
SMAD1-214ENST00000514831 CSF2RAP15509 400 aa27.21■■□□□ 1.95
SMAD1-214ENST00000514831 SLFN13Q68D06 897 aa27.21■■□□□ 1.95
SMAD1-214ENST00000514831 FAM133AQ8N9E0 248 aa27.21■■□□□ 1.95
SMAD1-214ENST00000514831 NEDD1Q8NHV4 660 aa27.21■■□□□ 1.95
SMAD1-214ENST00000514831 ACAD9Q9H845 621 aa27.21■■□□□ 1.95
SMAD1-214ENST00000514831 HOMER2Q9NSB8 354 aa27.21■■□□□ 1.95
SMAD1-214ENST00000514831 RCAN3Q9UKA8 241 aa27.21■■□□□ 1.95
SMAD1-214ENST00000514831 APPP05067 770 aa27.2■■□□□ 1.94
SMAD1-214ENST00000514831 STAT2P52630 851 aa27.2■■□□□ 1.94
SMAD1-214ENST00000514831 TSHZ3Q63HK5 1081 aa27.2■■□□□ 1.94
SMAD1-214ENST00000514831 IFNL3Q8IZI9 196 aa27.2■■□□□ 1.94
SMAD1-214ENST00000514831 PBX4Q9BYU1 374 aa27.2■■□□□ 1.94
SMAD1-214ENST00000514831 PRDM6Q9NQX0 595 aa27.2■■□□□ 1.94
SMAD1-214ENST00000514831 GBF1Q92538 1859 aa27.19■■□□□ 1.94
SMAD1-214ENST00000514831 PATL2C9JE40 543 aaKnown RBP27.19■■□□□ 1.94
SMAD1-214ENST00000514831 CD4P01730 458 aa27.19■■□□□ 1.94
SMAD1-214ENST00000514831 TSPY3P0CV98 308 aa27.19■■□□□ 1.94
SMAD1-214ENST00000514831 TSPY8P0CW00 308 aa27.19■■□□□ 1.94
SMAD1-214ENST00000514831 CNTN2Q02246 1040 aa27.19■■□□□ 1.94
SMAD1-214ENST00000514831 PPP1R12CQ9BZL4 782 aa27.19■■□□□ 1.94
SMAD1-214ENST00000514831 A1CFQ9NQ94 594 aaKnown RBP27.19■■□□□ 1.94
SMAD1-214ENST00000514831 LCTP09848 1927 aa27.18■■□□□ 1.94
SMAD1-214ENST00000514831 TMEM232C9JQI7 657 aa27.18■■□□□ 1.94
SMAD1-214ENST00000514831 PBX2P40425 430 aa27.18■■□□□ 1.94
SMAD1-214ENST00000514831 PDE4BQ07343 736 aa27.18■■□□□ 1.94
SMAD1-214ENST00000514831 LRRFIP1Q32MZ4 808 aaKnown RBP27.18■■□□□ 1.94
SMAD1-214ENST00000514831 TJAP1Q5JTD0 557 aa27.18■■□□□ 1.94
SMAD1-214ENST00000514831 C20orf194Q5TEA3 1177 aa27.18■■□□□ 1.94
SMAD1-214ENST00000514831 FAM160B2Q86V87 743 aa27.18■■□□□ 1.94
SMAD1-214ENST00000514831 GMCL1Q96IK5 515 aa27.18■■□□□ 1.94
SMAD1-214ENST00000514831 NACAP1Q9BZK3 213 aa27.18■■□□□ 1.94
SMAD1-214ENST00000514831 RNF146Q9NTX7 359 aa27.18■■□□□ 1.94
SMAD1-214ENST00000514831 ASTN1O14525 1302 aa27.17■■□□□ 1.94
SMAD1-214ENST00000514831 ZNF536O15090 1300 aa27.17■■□□□ 1.94
SMAD1-214ENST00000514831 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.17■■□□□ 1.94
SMAD1-214ENST00000514831 TNFAIP2Q03169 654 aa27.17■■□□□ 1.94
SMAD1-214ENST00000514831 CCDC129Q6ZRS4 1044 aa27.17■■□□□ 1.94
SMAD1-214ENST00000514831 ZNF365Q70YC5 407 aa27.17■■□□□ 1.94
SMAD1-214ENST00000514831 SLC43A3Q8NBI5 491 aa27.17■■□□□ 1.94
SMAD1-214ENST00000514831 GAS2L1Q99501 681 aaPredicted RBP27.17■■□□□ 1.94
SMAD1-214ENST00000514831 DCTPP1Q9H773 170 aa27.17■■□□□ 1.94
SMAD1-214ENST00000514831 GNEQ9Y223 722 aaKnown RBP27.17■■□□□ 1.94
SMAD1-214ENST00000514831 ASB14A6NK59 587 aa27.16■■□□□ 1.94
SMAD1-214ENST00000514831 GRXCR1A8MXD5 290 aa27.16■■□□□ 1.94
SMAD1-214ENST00000514831 ACRP10323 421 aa27.16■■□□□ 1.94
SMAD1-214ENST00000514831 BEX3Q00994 111 aa27.16■■□□□ 1.94
SMAD1-214ENST00000514831 TKFCQ3LXA3 575 aa27.16■■□□□ 1.94
SMAD1-214ENST00000514831 TLK2Q86UE8 772 aa27.16■■□□□ 1.94
SMAD1-214ENST00000514831 CHURC1Q8WUH1 139 aa27.16■■□□□ 1.94
SMAD1-214ENST00000514831 ISY1Q9ULR0 285 aaKnown RBP27.16■■□□□ 1.94
SMAD1-214ENST00000514831 SOWAHBA6NEL2 793 aa27.15■■□□□ 1.94
SMAD1-214ENST00000514831 CABYRO75952 493 aa27.15■■□□□ 1.94
SMAD1-214ENST00000514831 SLC3A2P08195 630 aaKnown RBP27.15■■□□□ 1.94
SMAD1-214ENST00000514831 STAG1Q8WVM7 1258 aa27.15■■□□□ 1.94
SMAD1-214ENST00000514831 AGBL1Q96MI9 1066 aa27.15■■□□□ 1.94
SMAD1-214ENST00000514831 IL23AQ9NPF7 189 aa27.15■■□□□ 1.94
SMAD1-214ENST00000514831 MYO9BQ13459 2157 aa27.15■■□□□ 1.94
SMAD1-214ENST00000514831 PLA2G6O60733 806 aa27.14■■□□□ 1.94
SMAD1-214ENST00000514831 CYP2C18P33260 490 aa27.14■■□□□ 1.94
SMAD1-214ENST00000514831 SLC1A4P43007 532 aa27.14■■□□□ 1.94
SMAD1-214ENST00000514831 TFAP4Q01664 338 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms