RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 RTP2Q5QGT7 225 aa7.68□□□□□ -1.18
HMGCS1-207ENST00000514610 SDE2Q6IQ49 451 aa7.68□□□□□ -1.18
HMGCS1-207ENST00000514610 POMZP3Q6PJE2 187 aa7.68□□□□□ -1.18
HMGCS1-207ENST00000514610 LINC00116Q8NCU8 138 aa7.68□□□□□ -1.18
HMGCS1-207ENST00000514610 MISP3Q96FF7 219 aa7.68□□□□□ -1.18
HMGCS1-207ENST00000514610 EXOC2Q96KP1 924 aa7.68□□□□□ -1.18
HMGCS1-207ENST00000514610 AARSD1Q9BTE6 412 aaKnown RBP7.68□□□□□ -1.18
HMGCS1-207ENST00000514610 TCFL5Q9UL49 500 aa7.68□□□□□ -1.18
HMGCS1-207ENST00000514610 STXBP3O00186 592 aa7.67□□□□□ -1.18
HMGCS1-207ENST00000514610 CD8BP10966 210 aa7.67□□□□□ -1.18
HMGCS1-207ENST00000514610 AMPD2Q01433 879 aa7.67□□□□□ -1.18
HMGCS1-207ENST00000514610 EGR3Q06889 387 aa7.67□□□□□ -1.18
HMGCS1-207ENST00000514610 CWF19L1Q69YN2 538 aaKnown RBP7.67□□□□□ -1.18
HMGCS1-207ENST00000514610 ZPBP2Q6X784 338 aa7.67□□□□□ -1.18
HMGCS1-207ENST00000514610 CRACR2BQ8N4Y2 399 aaPredicted RBP7.67□□□□□ -1.18
HMGCS1-207ENST00000514610 OSBP2Q969R2 916 aa7.67□□□□□ -1.18
HMGCS1-207ENST00000514610 FCRL3Q96P31 734 aaPredicted RBP7.67□□□□□ -1.18
HMGCS1-207ENST00000514610 NKX2-4Q9H2Z4 354 aa7.67□□□□□ -1.18
HMGCS1-207ENST00000514610 CCDC39Q9UFE4 941 aa7.67□□□□□ -1.18
HMGCS1-207ENST00000514610 TRAV20A0A0B4J274 112 aa7.66□□□□□ -1.18
HMGCS1-207ENST00000514610 TMEM82A0PJX8 343 aa7.66□□□□□ -1.18
HMGCS1-207ENST00000514610 PRODHO43272 600 aa7.66□□□□□ -1.18
HMGCS1-207ENST00000514610 FKTNO75072 461 aa7.66□□□□□ -1.18
HMGCS1-207ENST00000514610 ADAMTS4O75173 837 aa7.66□□□□□ -1.18
HMGCS1-207ENST00000514610 FGFR1P11362 822 aa7.66□□□□□ -1.18
HMGCS1-207ENST00000514610 PCBP3P57721 371 aaKnown RBP7.66□□□□□ -1.18
HMGCS1-207ENST00000514610 POU4F1Q01851 419 aa7.66□□□□□ -1.18
HMGCS1-207ENST00000514610 IKZF1Q13422 519 aa7.66□□□□□ -1.18
HMGCS1-207ENST00000514610 FAM209AQ5JX71 171 aa7.66□□□□□ -1.18
HMGCS1-207ENST00000514610 ZMYM1Q5SVZ6 1142 aa7.66□□□□□ -1.18
HMGCS1-207ENST00000514610 RNF111Q6ZNA4 994 aa7.66□□□□□ -1.18
HMGCS1-207ENST00000514610 IER2Q9BTL4 223 aa7.66□□□□□ -1.18
HMGCS1-207ENST00000514610 CARS2Q9HA77 564 aaKnown RBP7.66□□□□□ -1.18
HMGCS1-207ENST00000514610 TMEM260Q9NX78 707 aa7.66□□□□□ -1.18
HMGCS1-207ENST00000514610 SLC5A6Q9Y289 635 aa7.66□□□□□ -1.18
HMGCS1-207ENST00000514610 ZNF281Q9Y2X9 895 aa7.66□□□□□ -1.18
HMGCS1-207ENST00000514610 AURKAO14965 403 aa7.65□□□□□ -1.18
HMGCS1-207ENST00000514610 PABPC1P11940 636 aaKnown RBP7.65□□□□□ -1.18
HMGCS1-207ENST00000514610 L1CAMP32004 1257 aa7.65□□□□□ -1.18
HMGCS1-207ENST00000514610 GFRA1P56159 465 aa7.65□□□□□ -1.18
HMGCS1-207ENST00000514610 SCRN1Q12765 414 aa7.65□□□□□ -1.18
HMGCS1-207ENST00000514610 LONRF2Q1L5Z9 754 aa7.65□□□□□ -1.18
HMGCS1-207ENST00000514610 PRSS53Q2L4Q9 553 aa7.65□□□□□ -1.18
HMGCS1-207ENST00000514610 VSIG10LQ86VR7 867 aa7.65□□□□□ -1.18
HMGCS1-207ENST00000514610 STK11IPQ8N1F8 1099 aa7.65□□□□□ -1.18
HMGCS1-207ENST00000514610 C1orf159Q96HA4 380 aa7.65□□□□□ -1.18
HMGCS1-207ENST00000514610 CYP26B1Q9NR63 512 aa7.65□□□□□ -1.18
HMGCS1-207ENST00000514610 FANCLQ9NW38 375 aa7.65□□□□□ -1.18
HMGCS1-207ENST00000514610 CADPSQ9ULU8 1353 aa7.65□□□□□ -1.18
HMGCS1-207ENST00000514610 SHROOM4Q9ULL8 1493 aa7.64□□□□□ -1.19
HMGCS1-207ENST00000514610 ENPP3O14638 875 aa7.64□□□□□ -1.19
HMGCS1-207ENST00000514610 DLX3O60479 287 aa7.64□□□□□ -1.19
HMGCS1-207ENST00000514610 GSTM1P09488 218 aa7.64□□□□□ -1.19
HMGCS1-207ENST00000514610 CEBPAP49715 358 aaPredicted RBP7.64□□□□□ -1.19
HMGCS1-207ENST00000514610 TMEM67Q5HYA8 995 aa7.64□□□□□ -1.19
HMGCS1-207ENST00000514610 DENND5AQ6IQ26 1287 aa7.64□□□□□ -1.19
HMGCS1-207ENST00000514610 TMEM145Q8NBT3 493 aa7.64□□□□□ -1.19
HMGCS1-207ENST00000514610 ZSWIM2Q8NEG5 633 aa7.64□□□□□ -1.19
HMGCS1-207ENST00000514610 COPS5Q92905 334 aa7.64□□□□□ -1.19
HMGCS1-207ENST00000514610 KISS1RQ969F8 398 aaPredicted RBP7.64□□□□□ -1.19
HMGCS1-207ENST00000514610 AP5S1Q9NUS5 200 aa7.64□□□□□ -1.19
HMGCS1-207ENST00000514610 TRBV23-1A0A0A0MS06 115 aa7.63□□□□□ -1.19
HMGCS1-207ENST00000514610 SCG5P05408 212 aa7.63□□□□□ -1.19
HMGCS1-207ENST00000514610 SNRPB2P08579 225 aaKnown RBP7.63□□□□□ -1.19
HMGCS1-207ENST00000514610 HOXC12P31275 282 aa7.63□□□□□ -1.19
HMGCS1-207ENST00000514610 ECI1P42126 302 aa7.63□□□□□ -1.19
HMGCS1-207ENST00000514610 NSMFQ6X4W1 530 aa7.63□□□□□ -1.19
HMGCS1-207ENST00000514610 KREMEN2Q8NCW0 462 aa7.63□□□□□ -1.19
HMGCS1-207ENST00000514610 SLC26A8Q96RN1 970 aa7.63□□□□□ -1.19
HMGCS1-207ENST00000514610 CWC22Q9HCG8 908 aaKnown RBP7.63□□□□□ -1.19
HMGCS1-207ENST00000514610 GPRC5CQ9NQ84 441 aa7.63□□□□□ -1.19
HMGCS1-207ENST00000514610 PAK6Q9NQU5 681 aaPredicted RBP7.63□□□□□ -1.19
HMGCS1-207ENST00000514610 BACE2Q9Y5Z0 518 aa7.63□□□□□ -1.19
HMGCS1-207ENST00000514610 SSU72P8A0A1W2PR75 194 aa7.62□□□□□ -1.19
HMGCS1-207ENST00000514610 C2orf71A6NGG8 1288 aa7.62□□□□□ -1.19
HMGCS1-207ENST00000514610 ARNTLO00327 626 aa7.62□□□□□ -1.19
HMGCS1-207ENST00000514610 THBDP07204 575 aa7.62□□□□□ -1.19
HMGCS1-207ENST00000514610 RPL10P27635 214 aaKnown RBP7.62□□□□□ -1.19
HMGCS1-207ENST00000514610 NOP2P46087 812 aaKnown RBP7.62□□□□□ -1.19
HMGCS1-207ENST00000514610 ZP2Q05996 745 aa7.62□□□□□ -1.19
HMGCS1-207ENST00000514610 NTRK3Q16288 839 aa7.62□□□□□ -1.19
HMGCS1-207ENST00000514610 TKFCQ3LXA3 575 aa7.62□□□□□ -1.19
HMGCS1-207ENST00000514610 SLC35F1Q5T1Q4 408 aa7.62□□□□□ -1.19
HMGCS1-207ENST00000514610 ANGEL2Q5VTE6 544 aaKnown RBP7.62□□□□□ -1.19
HMGCS1-207ENST00000514610 RCSD1Q6JBY9 416 aa7.62□□□□□ -1.19
HMGCS1-207ENST00000514610 FLCNQ8NFG4 579 aa7.62□□□□□ -1.19
HMGCS1-207ENST00000514610 NPLOC4Q8TAT6 608 aa7.62□□□□□ -1.19
HMGCS1-207ENST00000514610 FRS2Q8WU20 508 aa7.62□□□□□ -1.19
HMGCS1-207ENST00000514610 CDC6Q99741 560 aa7.62□□□□□ -1.19
HMGCS1-207ENST00000514610 G6PC3Q9BUM1 346 aa7.62□□□□□ -1.19
HMGCS1-207ENST00000514610 CDADC1Q9BWV3 514 aa7.62□□□□□ -1.19
HMGCS1-207ENST00000514610 PRDM7Q9NQW5 492 aa7.62□□□□□ -1.19
HMGCS1-207ENST00000514610 LMCD1Q9NZU5 365 aa7.62□□□□□ -1.19
HMGCS1-207ENST00000514610 EBF1Q9UH73 591 aa7.62□□□□□ -1.19
HMGCS1-207ENST00000514610 MRPS23Q9Y3D9 190 aaKnown RBP7.62□□□□□ -1.19
HMGCS1-207ENST00000514610 DNAJC25-GNG10A0A024R161 153 aa7.61□□□□□ -1.19
HMGCS1-207ENST00000514610 BLACEA4D250 179 aa7.61□□□□□ -1.19
HMGCS1-207ENST00000514610 FGF10O15520 208 aaPredicted RBP7.61□□□□□ -1.19
HMGCS1-207ENST00000514610 CDC45O75419 566 aa7.61□□□□□ -1.19
HMGCS1-207ENST00000514610 KCNJ6P48051 423 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms