RNA–Protein interactions for RNA: ENST00000514497.6

SNCAIP-220, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-220ENST00000514497 RAET1EQ8TD07 263 aa19.26■□□□□ 0.67
SNCAIP-220ENST00000514497 WASF1Q92558 559 aa19.26■□□□□ 0.67
SNCAIP-220ENST00000514497 NCOA5Q9HCD5 579 aaKnown RBP19.26■□□□□ 0.67
SNCAIP-220ENST00000514497 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.26■□□□□ 0.67
SNCAIP-220ENST00000514497 BIN2Q9UBW5 565 aaPredicted RBP19.26■□□□□ 0.67
SNCAIP-220ENST00000514497 TRIM75PA6NK02 468 aa19.25■□□□□ 0.67
SNCAIP-220ENST00000514497 FDX1P10109 184 aa19.25■□□□□ 0.67
SNCAIP-220ENST00000514497 SSRP1Q08945 709 aaKnown RBP19.25■□□□□ 0.67
SNCAIP-220ENST00000514497 FUT2Q10981 343 aa19.25■□□□□ 0.67
SNCAIP-220ENST00000514497 ST3GAL1Q11201 340 aa19.25■□□□□ 0.67
SNCAIP-220ENST00000514497 CCDC96Q2M329 555 aa19.25■□□□□ 0.67
SNCAIP-220ENST00000514497 FASTKD5Q7L8L6 764 aaKnown RBP19.25■□□□□ 0.67
SNCAIP-220ENST00000514497 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.25■□□□□ 0.67
SNCAIP-220ENST00000514497 FAM177A1Q8N128 213 aaPredicted RBP19.25■□□□□ 0.67
SNCAIP-220ENST00000514497 U2AF1L4Q8WU68 220 aaKnown RBP19.25■□□□□ 0.67
SNCAIP-220ENST00000514497 RIOX1Q9H6W3 641 aa19.25■□□□□ 0.67
SNCAIP-220ENST00000514497 EMILIN3Q9NT22 766 aa19.25■□□□□ 0.67
SNCAIP-220ENST00000514497 SRRDQ9UH36 339 aa19.25■□□□□ 0.67
SNCAIP-220ENST00000514497 FEM1BQ9UK73 627 aa19.25■□□□□ 0.67
SNCAIP-220ENST00000514497 ALPK3Q96L96 1907 aa19.24■□□□□ 0.67
SNCAIP-220ENST00000514497 A0A0G2JLL6 359 aaPredicted RBP19.24■□□□□ 0.67
SNCAIP-220ENST00000514497 IRF6O14896 467 aa19.24■□□□□ 0.67
SNCAIP-220ENST00000514497 PRPF3O43395 683 aaKnown RBP19.24■□□□□ 0.67
SNCAIP-220ENST00000514497 RAD21O60216 631 aa19.24■□□□□ 0.67
SNCAIP-220ENST00000514497 FMNL1O95466 1100 aaPredicted RBP19.24■□□□□ 0.67
SNCAIP-220ENST00000514497 CTDNEP1O95476 244 aa19.24■□□□□ 0.67
SNCAIP-220ENST00000514497 PDCP20941 246 aa19.24■□□□□ 0.67
SNCAIP-220ENST00000514497 STAT2P52630 851 aa19.24■□□□□ 0.67
SNCAIP-220ENST00000514497 AKAP17AQ02040 695 aaKnown RBP19.24■□□□□ 0.67
SNCAIP-220ENST00000514497 TRAF1Q13077 416 aa19.24■□□□□ 0.67
SNCAIP-220ENST00000514497 SNAPC2Q13487 334 aa19.24■□□□□ 0.67
SNCAIP-220ENST00000514497 PRRT2Q7Z6L0 340 aaPredicted RBP19.24■□□□□ 0.67
SNCAIP-220ENST00000514497 CCDC84Q86UT8 332 aaPredicted RBP19.24■□□□□ 0.67
SNCAIP-220ENST00000514497 STAG2Q8N3U4 1231 aa19.24■□□□□ 0.67
SNCAIP-220ENST00000514497 TRIM47Q96LD4 638 aa19.24■□□□□ 0.67
SNCAIP-220ENST00000514497 MTMR10Q9NXD2 777 aa19.24■□□□□ 0.67
SNCAIP-220ENST00000514497 MYPNQ86TC9 1320 aa19.24■□□□□ 0.67
SNCAIP-220ENST00000514497 PTPDC1A2A3K4 754 aa19.23■□□□□ 0.67
SNCAIP-220ENST00000514497 DEXIO95424 95 aa19.23■□□□□ 0.67
SNCAIP-220ENST00000514497 VCAM1P19320 739 aa19.23■□□□□ 0.67
SNCAIP-220ENST00000514497 HOXD10P28358 340 aa19.23■□□□□ 0.67
SNCAIP-220ENST00000514497 PSMC4P43686 418 aa19.23■□□□□ 0.67
SNCAIP-220ENST00000514497 HMGCS2P54868 508 aa19.23■□□□□ 0.67
SNCAIP-220ENST00000514497 UBXN2AP68543 259 aa19.23■□□□□ 0.67
SNCAIP-220ENST00000514497 PABPC4Q13310 644 aaKnown RBP eCLIP19.23■□□□□ 0.67
SNCAIP-220ENST00000514497 RAB11FIP4Q86YS3 637 aa19.23■□□□□ 0.67
SNCAIP-220ENST00000514497 SRBD1Q8N5C6 995 aaKnown RBP19.23■□□□□ 0.67
SNCAIP-220ENST00000514497 VCANP13611 3396 aa19.23■□□□□ 0.67
SNCAIP-220ENST00000514497 PARP14Q460N5 1801 aa19.23■□□□□ 0.67
SNCAIP-220ENST00000514497 PLEKHA8P1O95397 391 aa19.22■□□□□ 0.67
SNCAIP-220ENST00000514497 CETPP11597 493 aa19.22■□□□□ 0.67
SNCAIP-220ENST00000514497 OSBPP22059 807 aa19.22■□□□□ 0.67
SNCAIP-220ENST00000514497 CTGFP29279 349 aa19.22■□□□□ 0.67
SNCAIP-220ENST00000514497 ZYXQ15942 572 aaKnown RBP19.22■□□□□ 0.67
SNCAIP-220ENST00000514497 SPICE1Q8N0Z3 855 aa19.22■□□□□ 0.67
SNCAIP-220ENST00000514497 PRPF38AQ8NAV1 312 aaKnown RBP19.22■□□□□ 0.67
SNCAIP-220ENST00000514497 FAM184AQ8NB25 1140 aa19.22■□□□□ 0.67
SNCAIP-220ENST00000514497 RRP36Q96EU6 259 aaKnown RBP19.22■□□□□ 0.67
SNCAIP-220ENST00000514497 ZCCHC17Q9NP64 241 aaKnown RBP19.22■□□□□ 0.67
SNCAIP-220ENST00000514497 PNMA2Q9UL42 364 aa19.22■□□□□ 0.67
SNCAIP-220ENST00000514497 MTMR7Q9Y216 660 aa19.22■□□□□ 0.67
SNCAIP-220ENST00000514497 CNTNAP5Q8WYK1 1306 aa19.22■□□□□ 0.67
SNCAIP-220ENST00000514497 USP17L15C9J2P7 530 aa19.21■□□□□ 0.67
SNCAIP-220ENST00000514497 BTBD19C9JJ37 291 aa19.21■□□□□ 0.67
SNCAIP-220ENST00000514497 USP17L13C9JLJ4 530 aa19.21■□□□□ 0.67
SNCAIP-220ENST00000514497 TMEM232C9JQI7 657 aa19.21■□□□□ 0.67
SNCAIP-220ENST00000514497 USP17L11C9JVI0 530 aa19.21■□□□□ 0.67
SNCAIP-220ENST00000514497 USP17L18D6R9N7 530 aa19.21■□□□□ 0.67
SNCAIP-220ENST00000514497 USP17L22D6RA61 530 aa19.21■□□□□ 0.67
SNCAIP-220ENST00000514497 USP17L17D6RBQ6 530 aa19.21■□□□□ 0.67
SNCAIP-220ENST00000514497 USP17L19D6RCP7 530 aa19.21■□□□□ 0.67
SNCAIP-220ENST00000514497 USP17L20D6RJB6 530 aa19.21■□□□□ 0.67
SNCAIP-220ENST00000514497 hCG_1984214I3L0E3 225 aa19.21■□□□□ 0.67
SNCAIP-220ENST00000514497 GOLGA8HP0CJ92 632 aa19.21■□□□□ 0.67
SNCAIP-220ENST00000514497 GJB2P29033 226 aa19.21■□□□□ 0.67
SNCAIP-220ENST00000514497 HOXA7P31268 230 aaPredicted RBP19.21■□□□□ 0.67
SNCAIP-220ENST00000514497 BMP8BP34820 402 aa19.21■□□□□ 0.67
SNCAIP-220ENST00000514497 USP17L24Q0WX57 530 aa19.21■□□□□ 0.67
SNCAIP-220ENST00000514497 KIAA1755Q5JYT7 1200 aa19.21■□□□□ 0.67
SNCAIP-220ENST00000514497 FAM83BQ5T0W9 1011 aa19.21■□□□□ 0.67
SNCAIP-220ENST00000514497 KCTD1Q719H9 257 aa19.21■□□□□ 0.67
SNCAIP-220ENST00000514497 ZNF713Q8N859 430 aaPredicted RBP19.21■□□□□ 0.67
SNCAIP-220ENST00000514497 MTMR8Q96EF0 704 aa19.21■□□□□ 0.67
SNCAIP-220ENST00000514497 GPCPD1Q9NPB8 672 aa19.21■□□□□ 0.67
SNCAIP-220ENST00000514497 ORC3Q9UBD5 711 aaPredicted RBP19.21■□□□□ 0.67
SNCAIP-220ENST00000514497 BAZ2BQ9UIF8 2168 aaKnown RBP19.21■□□□□ 0.67
SNCAIP-220ENST00000514497 SLC45A1Q9Y2W3 748 aa19.21■□□□□ 0.67
SNCAIP-220ENST00000514497 SGPL1O95470 568 aa19.2■□□□□ 0.66
SNCAIP-220ENST00000514497 XBP1P17861 261 aa19.2■□□□□ 0.66
SNCAIP-220ENST00000514497 ADGRF4Q8IZF3 695 aa19.2■□□□□ 0.66
SNCAIP-220ENST00000514497 GDF15Q99988 308 aa19.2■□□□□ 0.66
SNCAIP-220ENST00000514497 SLC26A6Q9BXS9 759 aa19.2■□□□□ 0.66
SNCAIP-220ENST00000514497 RPAP3Q9H6T3 665 aaPredicted RBP19.2■□□□□ 0.66
SNCAIP-220ENST00000514497 HOXC10Q9NYD6 342 aa19.2■□□□□ 0.66
SNCAIP-220ENST00000514497 SEC63Q9UGP8 760 aaKnown RBP19.2■□□□□ 0.66
SNCAIP-220ENST00000514497 CPA4Q9UI42 421 aa19.2■□□□□ 0.66
SNCAIP-220ENST00000514497 FRMPD2Q68DX3 1309 aaPredicted RBP19.2■□□□□ 0.66
SNCAIP-220ENST00000514497 CYTH3O43739 400 aa19.19■□□□□ 0.66
SNCAIP-220ENST00000514497 FDPSP14324 419 aaKnown RBP19.19■□□□□ 0.66
SNCAIP-220ENST00000514497 IKQ13123 557 aaPredicted RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms