RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 MOB2Q70IA6 237 aa22.65■■□□□ 1.22
SSBP2-218ENST00000514493 DAGLBQ8NCG7 672 aa22.65■■□□□ 1.22
SSBP2-218ENST00000514493 LEO1Q8WVC0 666 aaPredicted RBP22.65■■□□□ 1.22
SSBP2-218ENST00000514493 TFIP11Q9UBB9 837 aaKnown RBP22.65■■□□□ 1.22
SSBP2-218ENST00000514493 ITGBL1O95965 494 aaPredicted RBP22.64■■□□□ 1.22
SSBP2-218ENST00000514493 DGKZQ13574 1117 aa22.64■■□□□ 1.22
SSBP2-218ENST00000514493 ZMYND12Q9H0C1 365 aa22.64■■□□□ 1.22
SSBP2-218ENST00000514493 TNFRSF25Q93038 417 aa22.63■■□□□ 1.21
SSBP2-218ENST00000514493 GZF1Q9H116 711 aaPredicted RBP22.63■■□□□ 1.21
SSBP2-218ENST00000514493 PCDHA4Q9UN74 947 aa22.63■■□□□ 1.21
SSBP2-218ENST00000514493 COL11A1P12107 1806 aaPredicted RBP22.63■■□□□ 1.21
SSBP2-218ENST00000514493 HMGCS2P54868 508 aa22.63■■□□□ 1.21
SSBP2-218ENST00000514493 SMC1BQ8NDV3 1235 aa22.63■■□□□ 1.21
SSBP2-218ENST00000514493 CLMNQ96JQ2 1002 aa22.63■■□□□ 1.21
SSBP2-218ENST00000514493 USP28Q96RU2 1077 aa22.63■■□□□ 1.21
SSBP2-218ENST00000514493 ELP3Q9H9T3 547 aa22.63■■□□□ 1.21
SSBP2-218ENST00000514493 SPDYE5A6NIY4 337 aa22.62■■□□□ 1.21
SSBP2-218ENST00000514493 GSE1Q14687 1217 aa22.62■■□□□ 1.21
SSBP2-218ENST00000514493 ERO1BQ86YB8 467 aa22.62■■□□□ 1.21
SSBP2-218ENST00000514493 BLIDQ8IZY5 108 aa22.62■■□□□ 1.21
SSBP2-218ENST00000514493 COA7Q96BR5 231 aa22.62■■□□□ 1.21
SSBP2-218ENST00000514493 RANBP17Q9H2T7 1088 aaKnown RBP22.62■■□□□ 1.21
SSBP2-218ENST00000514493 FBXO28Q9NVF7 368 aa22.62■■□□□ 1.21
SSBP2-218ENST00000514493 PPATQ06203 517 aa22.61■■□□□ 1.21
SSBP2-218ENST00000514493 SH3D19Q5HYK7 790 aa22.61■■□□□ 1.21
SSBP2-218ENST00000514493 LDLRAD1Q5T700 205 aa22.61■■□□□ 1.21
SSBP2-218ENST00000514493 KIFC2Q96AC6 838 aa22.61■■□□□ 1.21
SSBP2-218ENST00000514493 RPAP3Q9H6T3 665 aaPredicted RBP22.61■■□□□ 1.21
SSBP2-218ENST00000514493 ZNF408Q9H9D4 720 aa22.61■■□□□ 1.21
SSBP2-218ENST00000514493 RBBP6Q7Z6E9 1792 aaKnown RBP22.61■■□□□ 1.21
SSBP2-218ENST00000514493 UNCXA6NJT0 531 aa22.61■■□□□ 1.21
SSBP2-218ENST00000514493 M0R2N6 131 aa22.61■■□□□ 1.21
SSBP2-218ENST00000514493 GNA11P29992 359 aa22.61■■□□□ 1.21
SSBP2-218ENST00000514493 FKBP1BP68106 108 aa22.61■■□□□ 1.21
SSBP2-218ENST00000514493 CAVIN1Q6NZI2 390 aaKnown RBP22.61■■□□□ 1.21
SSBP2-218ENST00000514493 CNKSR2Q8WXI2 1034 aa22.61■■□□□ 1.21
SSBP2-218ENST00000514493 SLF1Q9BQI6 1058 aa22.61■■□□□ 1.21
SSBP2-218ENST00000514493 AMNQ9BXJ7 453 aa22.61■■□□□ 1.21
SSBP2-218ENST00000514493 TANGO6Q9C0B7 1094 aa22.61■■□□□ 1.21
SSBP2-218ENST00000514493 C6orf50Q9HD87 102 aa22.61■■□□□ 1.21
SSBP2-218ENST00000514493 SMCO2A6NFE2 343 aa22.6■■□□□ 1.21
SSBP2-218ENST00000514493 FTOQ9C0B1 505 aaKnown RBP eCLIP22.6■■□□□ 1.214e-11■■■■■ 28.4
SSBP2-218ENST00000514493 TMOD4Q9NZQ9 345 aa22.6■■□□□ 1.21
SSBP2-218ENST00000514493 ADAMTS3O15072 1205 aa22.59■■□□□ 1.21
SSBP2-218ENST00000514493 SNAP25P60880 206 aa22.59■■□□□ 1.21
SSBP2-218ENST00000514493 FBXO11Q86XK2 927 aa22.59■■□□□ 1.21
SSBP2-218ENST00000514493 OTUD5Q96G74 571 aa22.59■■□□□ 1.21
SSBP2-218ENST00000514493 POLR3EQ9NVU0 708 aa22.59■■□□□ 1.21
SSBP2-218ENST00000514493 RTEL1Q9NZ71 1219 aa22.59■■□□□ 1.21
SSBP2-218ENST00000514493 RCOR1Q9UKL0 485 aa22.59■■□□□ 1.21
SSBP2-218ENST00000514493 ADCY7P51828 1080 aa22.58■■□□□ 1.21
SSBP2-218ENST00000514493 CEBPZQ03701 1054 aaKnown RBP22.58■■□□□ 1.21
SSBP2-218ENST00000514493 PPIL2Q13356 520 aa22.58■■□□□ 1.21
SSBP2-218ENST00000514493 RILPL1Q5EBL4 403 aa22.58■■□□□ 1.21
SSBP2-218ENST00000514493 PRPF38AQ8NAV1 312 aaKnown RBP22.58■■□□□ 1.21
SSBP2-218ENST00000514493 BICD2Q8TD16 824 aa22.58■■□□□ 1.21
SSBP2-218ENST00000514493 PCDHA1Q9Y5I3 950 aa22.58■■□□□ 1.21
SSBP2-218ENST00000514493 FLOT1O75955 427 aa22.58■■□□□ 1.2
SSBP2-218ENST00000514493 NASPP49321 788 aaPredicted RBP22.58■■□□□ 1.2
SSBP2-218ENST00000514493 EARS2Q5JPH6 523 aaKnown RBP22.58■■□□□ 1.2
SSBP2-218ENST00000514493 GBA2Q9HCG7 927 aaPredicted RBP22.58■■□□□ 1.2
SSBP2-218ENST00000514493 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.58■■□□□ 1.2
SSBP2-218ENST00000514493 PPP1R9AQ9ULJ8 1098 aa22.58■■□□□ 1.2
SSBP2-218ENST00000514493 A0A0G2JMZ2 1700 aa22.57■■□□□ 1.2
SSBP2-218ENST00000514493 MYH7BA7E2Y1 1941 aa22.57■■□□□ 1.2
SSBP2-218ENST00000514493 FAM205CA6NFA0 338 aa22.57■■□□□ 1.2
SSBP2-218ENST00000514493 IRF6O14896 467 aa22.57■■□□□ 1.2
SSBP2-218ENST00000514493 YEATS4O95619 227 aa22.57■■□□□ 1.2
SSBP2-218ENST00000514493 FSTL1Q12841 308 aa22.57■■□□□ 1.2
SSBP2-218ENST00000514493 RIC8AQ9NPQ8 531 aa22.57■■□□□ 1.2
SSBP2-218ENST00000514493 PCDHA6Q9UN73 950 aa22.57■■□□□ 1.2
SSBP2-218ENST00000514493 KCNH4Q9UQ05 1017 aa22.57■■□□□ 1.2
SSBP2-218ENST00000514493 PCDHA8Q9Y5H6 950 aa22.57■■□□□ 1.2
SSBP2-218ENST00000514493 PASKQ96RG2 1323 aa22.57■■□□□ 1.2
SSBP2-218ENST00000514493 A0A0G2JLL6 359 aaPredicted RBP22.56■■□□□ 1.2
SSBP2-218ENST00000514493 CXCL11O14625 94 aa22.56■■□□□ 1.2
SSBP2-218ENST00000514493 CELF2O95319 508 aaKnown RBP22.56■■□□□ 1.2
SSBP2-218ENST00000514493 C1QTNF8P60827 252 aa22.56■■□□□ 1.2
SSBP2-218ENST00000514493 TRAF1Q13077 416 aa22.56■■□□□ 1.2
SSBP2-218ENST00000514493 NOM1Q5C9Z4 860 aaKnown RBP22.56■■□□□ 1.2
SSBP2-218ENST00000514493 ANO1Q5XXA6 986 aa22.56■■□□□ 1.2
SSBP2-218ENST00000514493 PRRT2Q7Z6L0 340 aaPredicted RBP22.56■■□□□ 1.2
SSBP2-218ENST00000514493 REXO1Q8N1G1 1221 aaKnown RBP22.56■■□□□ 1.2
SSBP2-218ENST00000514493 RASGRP4Q8TDF6 673 aa22.56■■□□□ 1.2
SSBP2-218ENST00000514493 SYAP1Q96A49 352 aaPredicted RBP22.56■■□□□ 1.2
SSBP2-218ENST00000514493 OPTNQ96CV9 577 aa22.56■■□□□ 1.2
SSBP2-218ENST00000514493 GOLGA6L4A6NEF3 574 aa22.55■■□□□ 1.2
SSBP2-218ENST00000514493 TOB1P50616 345 aaPredicted RBP22.55■■□□□ 1.2
SSBP2-218ENST00000514493 PIK3AP1Q6ZUJ8 805 aa22.55■■□□□ 1.2
SSBP2-218ENST00000514493 CUL5Q93034 780 aa22.55■■□□□ 1.2
SSBP2-218ENST00000514493 GLT8D2Q9H1C3 349 aa22.55■■□□□ 1.2
SSBP2-218ENST00000514493 NOL7Q9UMY1 257 aaKnown RBP22.55■■□□□ 1.2
SSBP2-218ENST00000514493 CLIC4Q9Y696 253 aa22.55■■□□□ 1.2
SSBP2-218ENST00000514493 USH1GQ495M9 461 aa22.55■■□□□ 1.2
SSBP2-218ENST00000514493 CCDC174Q6PII3 467 aa22.55■■□□□ 1.2
SSBP2-218ENST00000514493 SAMD1Q6SPF0 538 aaPredicted RBP22.55■■□□□ 1.2
SSBP2-218ENST00000514493 LINC00301Q8NCQ3 95 aa22.55■■□□□ 1.2
SSBP2-218ENST00000514493 PROCA1Q8NCQ7 364 aaPredicted RBP22.55■■□□□ 1.2
SSBP2-218ENST00000514493 TMEM63CQ9P1W3 806 aa22.55■■□□□ 1.2
SSBP2-218ENST00000514493 CCDC194A0A1B0GVG4 234 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms