RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 TBX2Q13207 712 aaPredicted RBP9.27□□□□□ -0.92
CPNE4-211ENST00000514439 LETM2Q2VYF4 491 aa9.27□□□□□ -0.92
CPNE4-211ENST00000514439 ASPRV1Q53RT3 343 aa9.27□□□□□ -0.92
CPNE4-211ENST00000514439 NAALADL2Q58DX5 795 aa9.27□□□□□ -0.92
CPNE4-211ENST00000514439 SOGA3Q5TF21 947 aa9.27□□□□□ -0.92
CPNE4-211ENST00000514439 APTXQ7Z2E3 356 aaKnown RBP9.27□□□□□ -0.92
CPNE4-211ENST00000514439 DBNDD1Q9H9R9 158 aa9.27□□□□□ -0.92
CPNE4-211ENST00000514439 CTNND2Q9UQB3 1225 aa9.27□□□□□ -0.92
CPNE4-211ENST00000514439 MYO3BQ8WXR4 1341 aa9.27□□□□□ -0.93
CPNE4-211ENST00000514439 ESYT2A0FGR8 921 aa9.27□□□□□ -0.93
CPNE4-211ENST00000514439 CTIFO43310 598 aaKnown RBP9.27□□□□□ -0.93
CPNE4-211ENST00000514439 CCNT1O60563 726 aaKnown RBP9.27□□□□□ -0.93
CPNE4-211ENST00000514439 TTLL1O95922 423 aa9.27□□□□□ -0.93
CPNE4-211ENST00000514439 NFIAQ12857 509 aa9.27□□□□□ -0.93
CPNE4-211ENST00000514439 NR1I3Q14994 352 aa9.27□□□□□ -0.93
CPNE4-211ENST00000514439 CDKAL1Q5VV42 579 aa9.27□□□□□ -0.93
CPNE4-211ENST00000514439 RRAGBQ5VZM2 374 aa9.27□□□□□ -0.93
CPNE4-211ENST00000514439 SPECC1LQ69YQ0 1117 aa9.27□□□□□ -0.93
CPNE4-211ENST00000514439 TMEM139Q8IV31 216 aa9.27□□□□□ -0.93
CPNE4-211ENST00000514439 REXO1Q8N1G1 1221 aaKnown RBP9.27□□□□□ -0.93
CPNE4-211ENST00000514439 ZNF710Q8N1W2 664 aa9.27□□□□□ -0.93
CPNE4-211ENST00000514439 RASSF8Q8NHQ8 419 aa9.27□□□□□ -0.93
CPNE4-211ENST00000514439 KCNQ5Q9NR82 932 aa9.27□□□□□ -0.93
CPNE4-211ENST00000514439 C10orf71Q711Q0 1435 aa9.26□□□□□ -0.93
CPNE4-211ENST00000514439 hCG_1984214I3L0E3 225 aa9.26□□□□□ -0.93
CPNE4-211ENST00000514439 RPN1P04843 607 aaKnown RBP9.26□□□□□ -0.93
CPNE4-211ENST00000514439 OR52Z1P0C646 297 aa9.26□□□□□ -0.93
CPNE4-211ENST00000514439 UBA7P41226 1012 aa9.26□□□□□ -0.93
CPNE4-211ENST00000514439 CRKP46108 304 aa9.26□□□□□ -0.93
CPNE4-211ENST00000514439 PODNQ7Z5L7 613 aa9.26□□□□□ -0.93
CPNE4-211ENST00000514439 NEK8Q86SG6 692 aa9.26□□□□□ -0.93
CPNE4-211ENST00000514439 C2CD5Q86YS7 1000 aa9.26□□□□□ -0.93
CPNE4-211ENST00000514439 ZNF713Q8N859 430 aaPredicted RBP9.26□□□□□ -0.93
CPNE4-211ENST00000514439 TBCKQ8TEA7 893 aa9.26□□□□□ -0.93
CPNE4-211ENST00000514439 CCSER1Q9C0I3 900 aa9.26□□□□□ -0.93
CPNE4-211ENST00000514439 KIF2AO00139 706 aaPredicted RBP9.26□□□□□ -0.93
CPNE4-211ENST00000514439 TEX33O43247 280 aa9.26□□□□□ -0.93
CPNE4-211ENST00000514439 COBLO75128 1261 aa9.26□□□□□ -0.93
CPNE4-211ENST00000514439 HLA-DOAP06340 250 aa9.26□□□□□ -0.93
CPNE4-211ENST00000514439 SLURP2P0DP57 97 aa9.26□□□□□ -0.93
CPNE4-211ENST00000514439 ZNF658Q5TYW1 1059 aaPredicted RBP9.26□□□□□ -0.93
CPNE4-211ENST00000514439 JAKMIP3Q5VZ66 844 aa9.26□□□□□ -0.93
CPNE4-211ENST00000514439 ZNF772Q68DY9 489 aaPredicted RBP9.26□□□□□ -0.93
CPNE4-211ENST00000514439 TC2NQ8N9U0 490 aa9.26□□□□□ -0.93
CPNE4-211ENST00000514439 LRRC15Q8TF66 581 aa9.26□□□□□ -0.93
CPNE4-211ENST00000514439 COA7Q96BR5 231 aa9.26□□□□□ -0.93
CPNE4-211ENST00000514439 GPCPD1Q9NPB8 672 aa9.26□□□□□ -0.93
CPNE4-211ENST00000514439 RMND1Q9NWS8 449 aa9.26□□□□□ -0.93
CPNE4-211ENST00000514439 BIN2Q9UBW5 565 aaPredicted RBP9.26□□□□□ -0.93
CPNE4-211ENST00000514439 PCDHAC2Q9Y5I4 1007 aa9.26□□□□□ -0.93
CPNE4-211ENST00000514439 ZNF543Q08ER8 600 aa9.25□□□□□ -0.93
CPNE4-211ENST00000514439 PAK1Q13153 545 aa9.25□□□□□ -0.93
CPNE4-211ENST00000514439 KIAA0825Q8IV33 1275 aa9.25□□□□□ -0.93
CPNE4-211ENST00000514439 ZFPM1Q8IX07 1006 aa9.25□□□□□ -0.93
CPNE4-211ENST00000514439 KIF18AQ8NI77 898 aa9.25□□□□□ -0.93
CPNE4-211ENST00000514439 AK8Q96MA6 479 aa9.25□□□□□ -0.93
CPNE4-211ENST00000514439 ZDHHC15Q96MV8 337 aa9.25□□□□□ -0.93
CPNE4-211ENST00000514439 MAP7D2Q96T17 732 aa9.25□□□□□ -0.93
CPNE4-211ENST00000514439 PLIN2Q99541 437 aa9.25□□□□□ -0.93
CPNE4-211ENST00000514439 EHD4Q9H223 541 aa9.25□□□□□ -0.93
CPNE4-211ENST00000514439 PDCL3Q9H2J4 239 aa9.25□□□□□ -0.93
CPNE4-211ENST00000514439 DNAJC18Q9H819 358 aa9.25□□□□□ -0.93
CPNE4-211ENST00000514439 TMEM260Q9NX78 707 aa9.25□□□□□ -0.93
CPNE4-211ENST00000514439 ADD3Q9UEY8 706 aaKnown RBP9.25□□□□□ -0.93
CPNE4-211ENST00000514439 RWDD2AQ9UIY3 292 aa9.25□□□□□ -0.93
CPNE4-211ENST00000514439 GDAQ9Y2T3 454 aa9.25□□□□□ -0.93
CPNE4-211ENST00000514439 MPHOSPH10O00566 681 aaKnown RBP9.25□□□□□ -0.93
CPNE4-211ENST00000514439 ARHGAP6O43182 974 aa9.25□□□□□ -0.93
CPNE4-211ENST00000514439 ADCY7P51828 1080 aa9.25□□□□□ -0.93
CPNE4-211ENST00000514439 CACNB3P54284 484 aa9.25□□□□□ -0.93
CPNE4-211ENST00000514439 ADKP55263 362 aaKnown RBP9.25□□□□□ -0.93
CPNE4-211ENST00000514439 NELFBQ8WX92 580 aa9.25□□□□□ -0.93
CPNE4-211ENST00000514439 CTAGE1Q96RT6 745 aa9.25□□□□□ -0.93
CPNE4-211ENST00000514439 BAG1Q99933 345 aaPredicted RBP9.25□□□□□ -0.93
CPNE4-211ENST00000514439 JMJD4Q9H9V9 463 aa9.25□□□□□ -0.93
CPNE4-211ENST00000514439 KBTBD4Q9NVX7 518 aa9.25□□□□□ -0.93
CPNE4-211ENST00000514439 H0YIN7 160 aa9.24□□□□□ -0.93
CPNE4-211ENST00000514439 CCP110O43303 1012 aa9.24□□□□□ -0.93
CPNE4-211ENST00000514439 ECE2O60344 883 aa9.24□□□□□ -0.93
CPNE4-211ENST00000514439 MYL1P05976 194 aa9.24□□□□□ -0.93
CPNE4-211ENST00000514439 PLCG1P19174 1290 aa9.24□□□□□ -0.93
CPNE4-211ENST00000514439 PBX1P40424 430 aa9.24□□□□□ -0.93
CPNE4-211ENST00000514439 PRCPP42785 496 aa9.24□□□□□ -0.93
CPNE4-211ENST00000514439 ATP2B2Q01814 1243 aa9.24□□□□□ -0.93
CPNE4-211ENST00000514439 CCDC96Q2M329 555 aa9.24□□□□□ -0.93
CPNE4-211ENST00000514439 STRIP1Q5VSL9 837 aa9.24□□□□□ -0.93
CPNE4-211ENST00000514439 STYK1Q6J9G0 422 aa9.24□□□□□ -0.93
CPNE4-211ENST00000514439 MTERF4Q7Z6M4 381 aaKnown RBP9.24□□□□□ -0.93
CPNE4-211ENST00000514439 CABP7Q86V35 215 aa9.24□□□□□ -0.93
CPNE4-211ENST00000514439 FCHSD1Q86WN1 690 aa9.24□□□□□ -0.93
CPNE4-211ENST00000514439 ADGRF4Q8IZF3 695 aa9.24□□□□□ -0.93
CPNE4-211ENST00000514439 MYH8P13535 1937 aa9.24□□□□□ -0.93
CPNE4-211ENST00000514439 PNMA6FA0A0J9YX94 578 aa9.23□□□□□ -0.93
CPNE4-211ENST00000514439 FAM196BA6NMK8 535 aa9.23□□□□□ -0.93
CPNE4-211ENST00000514439 KLRC4O43908 158 aa9.23□□□□□ -0.93
CPNE4-211ENST00000514439 STX10O60499 249 aa9.23□□□□□ -0.93
CPNE4-211ENST00000514439 PPP1R11O60927 126 aaPredicted RBP9.23□□□□□ -0.93
CPNE4-211ENST00000514439 TCP10Q12799 353 aa9.23□□□□□ -0.93
CPNE4-211ENST00000514439 ORC2Q13416 577 aaPredicted RBP9.23□□□□□ -0.93
CPNE4-211ENST00000514439 KCNB1Q14721 858 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms