RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 TMEM145Q8NBT3 493 aa6.25□□□□□ -1.41
NIPBL-207ENST00000513819 DAGLBQ8NCG7 672 aa6.25□□□□□ -1.41
NIPBL-207ENST00000513819 ENOX1Q8TC92 643 aaKnown RBP6.25□□□□□ -1.41
NIPBL-207ENST00000513819 CLUHP3Q96NS8 147 aa6.25□□□□□ -1.41
NIPBL-207ENST00000513819 TRIT1Q9H3H1 467 aaKnown RBP6.25□□□□□ -1.41
NIPBL-207ENST00000513819 GPATCH2Q9NW75 528 aa6.25□□□□□ -1.41
NIPBL-207ENST00000513819 PLD2O14939 933 aa6.24□□□□□ -1.41
NIPBL-207ENST00000513819 PPM1GO15355 546 aaPredicted RBP6.24□□□□□ -1.41
NIPBL-207ENST00000513819 CYP26A1O43174 497 aa6.24□□□□□ -1.41
NIPBL-207ENST00000513819 PROCP04070 461 aa6.24□□□□□ -1.41
NIPBL-207ENST00000513819 IFNGR1P15260 489 aa6.24□□□□□ -1.41
NIPBL-207ENST00000513819 TPP2P29144 1249 aaPredicted RBP6.24□□□□□ -1.41
NIPBL-207ENST00000513819 HOXC12P31275 282 aa6.24□□□□□ -1.41
NIPBL-207ENST00000513819 SCRN1Q12765 414 aa6.24□□□□□ -1.41
NIPBL-207ENST00000513819 RSPO4Q2I0M5 234 aaPredicted RBP6.24□□□□□ -1.41
NIPBL-207ENST00000513819 NKAPLQ5M9Q1 402 aa6.24□□□□□ -1.41
NIPBL-207ENST00000513819 ZNF655Q8N720 491 aaPredicted RBP6.24□□□□□ -1.41
NIPBL-207ENST00000513819 KCTD13Q8WZ19 329 aa6.24□□□□□ -1.41
NIPBL-207ENST00000513819 UBE2FQ969M7 185 aa6.24□□□□□ -1.41
NIPBL-207ENST00000513819 MKNK2Q9HBH9 465 aa6.24□□□□□ -1.41
NIPBL-207ENST00000513819 SPC25Q9HBM1 224 aa6.24□□□□□ -1.41
NIPBL-207ENST00000513819 CYP26B1Q9NR63 512 aa6.24□□□□□ -1.41
NIPBL-207ENST00000513819 PRKAB1Q9Y478 270 aa6.24□□□□□ -1.41
NIPBL-207ENST00000513819 IRS4O14654 1257 aaPredicted RBP6.23□□□□□ -1.41
NIPBL-207ENST00000513819 DNAJC6O75061 913 aa6.23□□□□□ -1.41
NIPBL-207ENST00000513819 C6orf222P0C671 652 aaPredicted RBP6.23□□□□□ -1.41
NIPBL-207ENST00000513819 MASP1P48740 699 aa6.23□□□□□ -1.41
NIPBL-207ENST00000513819 MAP4K2Q12851 820 aa6.23□□□□□ -1.41
NIPBL-207ENST00000513819 NTRK3Q16288 839 aa6.23□□□□□ -1.41
NIPBL-207ENST00000513819 PTPROQ16827 1216 aa6.23□□□□□ -1.41
NIPBL-207ENST00000513819 TAF7LQ5H9L4 462 aa6.23□□□□□ -1.41
NIPBL-207ENST00000513819 TSPYL5Q86VY4 417 aaPredicted RBP6.23□□□□□ -1.41
NIPBL-207ENST00000513819 ZDHHC13Q8IUH4 622 aa6.23□□□□□ -1.41
NIPBL-207ENST00000513819 NIM1KQ8IY84 436 aa6.23□□□□□ -1.41
NIPBL-207ENST00000513819 USHBP1Q8N6Y0 703 aa6.23□□□□□ -1.41
NIPBL-207ENST00000513819 NINJ1Q92982 152 aa6.23□□□□□ -1.41
NIPBL-207ENST00000513819 C1orf159Q96HA4 380 aa6.23□□□□□ -1.41
NIPBL-207ENST00000513819 CCDC140Q96MF4 163 aa6.23□□□□□ -1.41
NIPBL-207ENST00000513819 FCRL3Q96P31 734 aaPredicted RBP6.23□□□□□ -1.41
NIPBL-207ENST00000513819 SPOCK3Q9BQ16 436 aa6.23□□□□□ -1.41
NIPBL-207ENST00000513819 FOXP3Q9BZS1 431 aa6.23□□□□□ -1.41
NIPBL-207ENST00000513819 GPRC5CQ9NQ84 441 aa6.23□□□□□ -1.41
NIPBL-207ENST00000513819 SEMA3GQ9NS98 782 aa6.23□□□□□ -1.41
NIPBL-207ENST00000513819 PLAAQ9Y263 795 aa6.23□□□□□ -1.41
NIPBL-207ENST00000513819 DNAJC25-GNG10A0A024R161 153 aa6.22□□□□□ -1.41
NIPBL-207ENST00000513819 PRR19A6NJB7 356 aa6.22□□□□□ -1.41
NIPBL-207ENST00000513819 AURKAO14965 403 aa6.22□□□□□ -1.41
NIPBL-207ENST00000513819 DYRK3O43781 588 aa6.22□□□□□ -1.41
NIPBL-207ENST00000513819 RFPL3O75679 317 aa6.22□□□□□ -1.41
NIPBL-207ENST00000513819 SCG5P05408 212 aa6.22□□□□□ -1.41
NIPBL-207ENST00000513819 SYPP08247 313 aa6.22□□□□□ -1.41
NIPBL-207ENST00000513819 HSP90B1P14625 803 aaKnown RBP6.22□□□□□ -1.41
NIPBL-207ENST00000513819 VAV1P15498 845 aa6.22□□□□□ -1.41
NIPBL-207ENST00000513819 BMP8BP34820 402 aa6.22□□□□□ -1.41
NIPBL-207ENST00000513819 CLCN7P51798 805 aa6.22□□□□□ -1.41
NIPBL-207ENST00000513819 FNDC3BQ53EP0 1204 aaKnown RBP6.22□□□□□ -1.41
NIPBL-207ENST00000513819 SLC35F1Q5T1Q4 408 aa6.22□□□□□ -1.41
NIPBL-207ENST00000513819 DENND5AQ6IQ26 1287 aa6.22□□□□□ -1.41
NIPBL-207ENST00000513819 USP53Q70EK8 1073 aa6.22□□□□□ -1.41
NIPBL-207ENST00000513819 NETO1Q8TDF5 533 aa6.22□□□□□ -1.41
NIPBL-207ENST00000513819 SLC12A9Q9BXP2 914 aa6.22□□□□□ -1.41
NIPBL-207ENST00000513819 MRPL4Q9BYD3 311 aaKnown RBP6.22□□□□□ -1.41
NIPBL-207ENST00000513819 PIM2Q9P1W9 311 aa6.22□□□□□ -1.41
NIPBL-207ENST00000513819 ZC3H7BQ9UGR2 993 aaKnown RBP6.22□□□□□ -1.41
NIPBL-207ENST00000513819 NDOR1Q9UHB4 597 aa6.22□□□□□ -1.41
NIPBL-207ENST00000513819 BACE2Q9Y5Z0 518 aa6.22□□□□□ -1.41
NIPBL-207ENST00000513819 SSU72P8A0A1W2PR75 194 aa6.21□□□□□ -1.42
NIPBL-207ENST00000513819 C2orf71A6NGG8 1288 aa6.21□□□□□ -1.42
NIPBL-207ENST00000513819 FKTNO75072 461 aa6.21□□□□□ -1.42
NIPBL-207ENST00000513819 CPP00450 1065 aa6.21□□□□□ -1.42
NIPBL-207ENST00000513819 THBDP07204 575 aa6.21□□□□□ -1.42
NIPBL-207ENST00000513819 GSTM1P09488 218 aa6.21□□□□□ -1.42
NIPBL-207ENST00000513819 SDSP20132 328 aa6.21□□□□□ -1.42
NIPBL-207ENST00000513819 HOXA10P31260 410 aaPredicted RBP6.21□□□□□ -1.42
NIPBL-207ENST00000513819 NOP2P46087 812 aaKnown RBP6.21□□□□□ -1.42
NIPBL-207ENST00000513819 PCBP3P57721 371 aaKnown RBP6.21□□□□□ -1.42
NIPBL-207ENST00000513819 CPSF6Q16630 551 aaKnown RBP eCLIP6.21□□□□□ -1.42
NIPBL-207ENST00000513819 IFI16Q16666 785 aaKnown RBP6.21□□□□□ -1.42
NIPBL-207ENST00000513819 GAB4Q2WGN9 574 aa6.21□□□□□ -1.42
NIPBL-207ENST00000513819 THAP5Q7Z6K1 395 aa6.21□□□□□ -1.42
NIPBL-207ENST00000513819 KREMEN2Q8NCW0 462 aa6.21□□□□□ -1.42
NIPBL-207ENST00000513819 SLC7A14Q8TBB6 771 aa6.21□□□□□ -1.42
NIPBL-207ENST00000513819 COPS5Q92905 334 aa6.21□□□□□ -1.42
NIPBL-207ENST00000513819 MFSD3Q96ES6 412 aa6.21□□□□□ -1.42
NIPBL-207ENST00000513819 SLC52A2Q9HAB3 445 aa6.21□□□□□ -1.42
NIPBL-207ENST00000513819 ATP13A1Q9HD20 1204 aa6.21□□□□□ -1.42
NIPBL-207ENST00000513819 SFMBT1Q9UHJ3 866 aa6.21□□□□□ -1.42
NIPBL-207ENST00000513819 DUSP13Q9UII6 198 aa6.21□□□□□ -1.42
NIPBL-207ENST00000513819 TCFL5Q9UL49 500 aa6.21□□□□□ -1.42
NIPBL-207ENST00000513819 COL4A3BPQ9Y5P4 624 aa6.21□□□□□ -1.42
NIPBL-207ENST00000513819 TMEM265A0A087WTH1 108 aa6.2□□□□□ -1.42
NIPBL-207ENST00000513819 MSTNO14793 375 aa6.2□□□□□ -1.42
NIPBL-207ENST00000513819 EIF5BO60841 1220 aaKnown RBP6.2□□□□□ -1.42
NIPBL-207ENST00000513819 ZNF205O95201 554 aa6.2□□□□□ -1.42
NIPBL-207ENST00000513819 MYCLP1P12525 358 aaPredicted RBP6.2□□□□□ -1.42
NIPBL-207ENST00000513819 FOSL1P15407 271 aa6.2□□□□□ -1.42
NIPBL-207ENST00000513819 LTKP29376 864 aa6.2□□□□□ -1.42
NIPBL-207ENST00000513819 GABREP78334 506 aa6.2□□□□□ -1.42
NIPBL-207ENST00000513819 TM4SF20Q53R12 229 aa6.2□□□□□ -1.42
NIPBL-207ENST00000513819 RTP2Q5QGT7 225 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms