RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 EEF1GP26641 437 aaKnown RBP8.56□□□□□ -1.04
CLCN3-209ENST00000513761 LONP1P36776 959 aaKnown RBP8.56□□□□□ -1.04
CLCN3-209ENST00000513761 SNCBQ16143 134 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 SRLQ86TD4 932 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 METTL16Q86W50 562 aaKnown RBP8.56□□□□□ -1.04
CLCN3-209ENST00000513761 SPATS2Q86XZ4 545 aaKnown RBP8.56□□□□□ -1.04
CLCN3-209ENST00000513761 BANK1Q8NDB2 785 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 ASIC3Q9UHC3 531 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 FAM169AQ9Y6X4 670 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 TSGA10IPQ3SY00 556 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 CCDC105Q8IYK2 499 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 CCDC170Q8IYT3 715 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 REXO1Q8N1G1 1221 aaKnown RBP8.56□□□□□ -1.04
CLCN3-209ENST00000513761 OXER1Q8TDS5 423 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 MRPL44Q9H9J2 332 aaKnown RBP8.56□□□□□ -1.04
CLCN3-209ENST00000513761 TMOD2Q9NZR1 351 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 PARP3Q9Y6F1 533 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 TRIM49BA6NDI0 452 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 CHMP2AO43633 222 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 PLA2G4AP47712 749 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 TEX11Q8IYF3 940 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 MYOCDQ8IZQ8 938 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 PIH1D3Q9NQM4 214 aaKnown RBP8.56□□□□□ -1.04
CLCN3-209ENST00000513761 EIF4A3P38919 411 aaKnown RBP8.56□□□□□ -1.04
CLCN3-209ENST00000513761 PEX19P40855 299 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 IFNAR2P48551 515 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 CUL4BQ13620 913 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 SUGCTQ9HAC7 445 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 FAM184BQ9ULE4 1060 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 ZBTB21Q9ULJ3 1066 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 FRMD4BQ9Y2L6 1034 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 PCDHB13Q9Y5F0 798 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 SOS2Q07890 1332 aaPredicted RBP8.56□□□□□ -1.04
CLCN3-209ENST00000513761 PCCAP05165 728 aaPredicted RBP8.56□□□□□ -1.04
CLCN3-209ENST00000513761 OR52Z1P0C646 297 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 MRPL12P52815 198 aaKnown RBP8.56□□□□□ -1.04
CLCN3-209ENST00000513761 ARHGAP44Q17R89 818 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 MAPKAPK5Q8IW41 473 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 LCORLQ8N3X6 602 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 PNMA1Q8ND90 353 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 CCDC160A6NGH7 325 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 FMR1Q06787 632 aaKnown RBP eCLIP8.56□□□□□ -1.048e-6■■■□□ 16.7
CLCN3-209ENST00000513761 LRRC41Q15345 812 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 MMS22LQ6ZRQ5 1243 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 TAOK1Q7L7X3 1001 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 P2RX5Q93086 422 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 NUCKS1Q9H1E3 243 aaKnown RBP8.56□□□□□ -1.04
CLCN3-209ENST00000513761 EHMT1Q9H9B1 1298 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 NFU1Q9UMS0 254 aa8.56□□□□□ -1.04
CLCN3-209ENST00000513761 A0A0G2JLW4 131 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 GCKP35557 465 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 MCTP2Q6DN12 878 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 MB21D2Q8IYB1 491 aaPredicted RBP8.55□□□□□ -1.04
CLCN3-209ENST00000513761 UBL4BQ8N7F7 174 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 MB21D1Q8N884 522 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 AMFRQ9UKV5 643 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 CEP83Q9Y592 693 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 CYP2D7A0A087X1C5 515 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 ADCY7P51828 1080 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 SMCR8Q8TEV9 937 aaPredicted RBP8.55□□□□□ -1.04
CLCN3-209ENST00000513761 IQCDQ96DY2 449 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 ATP2A1O14983 1001 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 NR1D1P20393 614 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 TRIM68Q6AZZ1 485 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 ZNF804AQ7Z570 1209 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 SYCE1Q8N0S2 351 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 TGFBRAP1Q8WUH2 860 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 TCP11Q8WWU5 503 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 PKD2L1Q9P0L9 805 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 FEZ2Q9UHY8 353 aaPredicted RBP8.55□□□□□ -1.04
CLCN3-209ENST00000513761 FHOD1Q9Y613 1164 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 NEDD4P46934 1319 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 USP42Q9H9J4 1324 aaKnown RBP8.55□□□□□ -1.04
CLCN3-209ENST00000513761 GCNT3O95395 438 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 ALDH3A1P30838 453 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 EXOSC10Q01780 885 aaKnown RBP8.55□□□□□ -1.04
CLCN3-209ENST00000513761 UAP1Q16222 522 aaPredicted RBP8.55□□□□□ -1.04
CLCN3-209ENST00000513761 MAEAQ7L5Y9 396 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 RAB17Q9H0T7 212 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 ARHGAP31Q2M1Z3 1444 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 CALUO43852 315 aaPredicted RBP8.55□□□□□ -1.04
CLCN3-209ENST00000513761 N4BP1O75113 896 aaKnown RBP8.55□□□□□ -1.04
CLCN3-209ENST00000513761 CTDNEP1O95476 244 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 ATP5DP30049 168 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 MCAMP43121 646 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 SARNPP82979 210 aaKnown RBP8.55□□□□□ -1.04
CLCN3-209ENST00000513761 ZBED6P86452 979 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 RDH13Q8NBN7 331 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 LRRN4CLQ8ND94 238 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 RIN2Q8WYP3 895 aaPredicted RBP8.55□□□□□ -1.04
CLCN3-209ENST00000513761 ODF2LQ9ULJ1 636 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 PCDHA13Q9Y5I0 950 aa8.55□□□□□ -1.04
CLCN3-209ENST00000513761 DDX12PQ92771 950 aa8.54□□□□□ -1.04
CLCN3-209ENST00000513761 PLCB1Q9NQ66 1216 aa8.54□□□□□ -1.04
CLCN3-209ENST00000513761 PLEKHA8P1O95397 391 aa8.54□□□□□ -1.04
CLCN3-209ENST00000513761 LIFRP42702 1097 aa8.54□□□□□ -1.04
CLCN3-209ENST00000513761 KIF11P52732 1056 aa8.54□□□□□ -1.04
CLCN3-209ENST00000513761 ZNF131P52739 623 aa8.54□□□□□ -1.04
CLCN3-209ENST00000513761 APBA1Q02410 837 aa8.54□□□□□ -1.04
CLCN3-209ENST00000513761 ARHGEF2Q92974 986 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms