RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 FZD9O00144 591 aa8.21□□□□□ -1.1
HMGN1P17-201ENST00000513734 OIP5O43482 229 aa8.21□□□□□ -1.1
HMGN1P17-201ENST00000513734 BCRP11274 1271 aa8.21□□□□□ -1.1
HMGN1P17-201ENST00000513734 CDC25BP30305 580 aa8.21□□□□□ -1.1
HMGN1P17-201ENST00000513734 ALDH1B1P30837 517 aa8.21□□□□□ -1.1
HMGN1P17-201ENST00000513734 PCDH1Q08174 1060 aa8.21□□□□□ -1.1
HMGN1P17-201ENST00000513734 MAP3K11Q16584 847 aa8.21□□□□□ -1.1
HMGN1P17-201ENST00000513734 AOC3Q16853 763 aa8.21□□□□□ -1.1
HMGN1P17-201ENST00000513734 SLC10A5Q5PT55 438 aa8.21□□□□□ -1.1
HMGN1P17-201ENST00000513734 CHSY3Q70JA7 882 aa8.21□□□□□ -1.1
HMGN1P17-201ENST00000513734 SV2BQ7L1I2 683 aa8.21□□□□□ -1.1
HMGN1P17-201ENST00000513734 PPP1R42Q7Z4L9 355 aa8.21□□□□□ -1.1
HMGN1P17-201ENST00000513734 VN1R5Q7Z5H4 357 aa8.21□□□□□ -1.1
HMGN1P17-201ENST00000513734 USP48Q86UV5 1035 aa8.21□□□□□ -1.1
HMGN1P17-201ENST00000513734 RTKN2Q8IZC4 609 aa8.21□□□□□ -1.1
HMGN1P17-201ENST00000513734 PLBD2Q8NHP8 589 aa8.21□□□□□ -1.1
HMGN1P17-201ENST00000513734 JARID2Q92833 1246 aaPredicted RBP8.21□□□□□ -1.1
HMGN1P17-201ENST00000513734 FAM89AQ96GI7 184 aa8.21□□□□□ -1.1
HMGN1P17-201ENST00000513734 RBM17Q96I25 401 aaKnown RBP8.21□□□□□ -1.1
HMGN1P17-201ENST00000513734 BTBD6Q96KE9 485 aa8.21□□□□□ -1.1
HMGN1P17-201ENST00000513734 CRAMP1Q96RY5 1269 aa8.21□□□□□ -1.1
HMGN1P17-201ENST00000513734 PSMD1Q99460 953 aa8.21□□□□□ -1.1
HMGN1P17-201ENST00000513734 TRIM56Q9BRZ2 755 aaKnown RBP8.21□□□□□ -1.1
HMGN1P17-201ENST00000513734 ISCA1Q9BUE6 129 aa8.21□□□□□ -1.1
HMGN1P17-201ENST00000513734 TAF1DQ9H5J8 278 aaPredicted RBP8.21□□□□□ -1.1
HMGN1P17-201ENST00000513734 CCSER2Q9H7U1 834 aa8.21□□□□□ -1.1
HMGN1P17-201ENST00000513734 COPRSQ9NQ92 184 aa8.21□□□□□ -1.1
HMGN1P17-201ENST00000513734 IFT57Q9NWB7 429 aa8.21□□□□□ -1.1
HMGN1P17-201ENST00000513734 GPN3Q9UHW5 284 aaPredicted RBP8.21□□□□□ -1.1
HMGN1P17-201ENST00000513734 PCDHGB7Q9Y5F8 929 aa8.21□□□□□ -1.1
HMGN1P17-201ENST00000513734 SHISA8B8ZZ34 492 aa8.2□□□□□ -1.1
HMGN1P17-201ENST00000513734 F6X3S4 739 aa8.2□□□□□ -1.1
HMGN1P17-201ENST00000513734 M0R082 166 aa8.2□□□□□ -1.1
HMGN1P17-201ENST00000513734 LILRB5O75023 590 aa8.2□□□□□ -1.1
HMGN1P17-201ENST00000513734 CELA3AP09093 270 aa8.2□□□□□ -1.1
HMGN1P17-201ENST00000513734 HOXB7P09629 217 aa8.2□□□□□ -1.1
HMGN1P17-201ENST00000513734 AMPD1P23109 780 aa8.2□□□□□ -1.1
HMGN1P17-201ENST00000513734 MAP3K10Q02779 954 aa8.2□□□□□ -1.1
HMGN1P17-201ENST00000513734 GRIK5Q16478 980 aa8.2□□□□□ -1.1
HMGN1P17-201ENST00000513734 KANK3Q6NY19 840 aa8.2□□□□□ -1.1
HMGN1P17-201ENST00000513734 C8orf86Q6ZUL3 223 aa8.2□□□□□ -1.1
HMGN1P17-201ENST00000513734 IL22RA1Q8N6P7 574 aa8.2□□□□□ -1.1
HMGN1P17-201ENST00000513734 ZNF417Q8TAU3 575 aa8.2□□□□□ -1.1
HMGN1P17-201ENST00000513734 ZNF587Q96SQ5 575 aaPredicted RBP8.2□□□□□ -1.1
HMGN1P17-201ENST00000513734 TGIF2Q9GZN2 237 aa8.2□□□□□ -1.1
HMGN1P17-201ENST00000513734 DBF4Q9UBU7 674 aaPredicted RBP8.2□□□□□ -1.1
HMGN1P17-201ENST00000513734 TRMT112Q9UI30 125 aaKnown RBP8.2□□□□□ -1.1
HMGN1P17-201ENST00000513734 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.2□□□□□ -1.1
HMGN1P17-201ENST00000513734 SH3TC1Q8TE82 1336 aa8.2□□□□□ -1.1
HMGN1P17-201ENST00000513734 SHTN1A0MZ66 631 aa8.19□□□□□ -1.1
HMGN1P17-201ENST00000513734 EPHA1P21709 976 aa8.19□□□□□ -1.1
HMGN1P17-201ENST00000513734 AFF1P51825 1210 aaKnown RBP8.19□□□□□ -1.1
HMGN1P17-201ENST00000513734 GNAI1P63096 354 aa8.19□□□□□ -1.1
HMGN1P17-201ENST00000513734 IKBKEQ14164 716 aa8.19□□□□□ -1.1
HMGN1P17-201ENST00000513734 ZNF423Q2M1K9 1284 aa8.19□□□□□ -1.1
HMGN1P17-201ENST00000513734 LYPD4Q6UWN0 246 aa8.19□□□□□ -1.1
HMGN1P17-201ENST00000513734 ERMP1Q7Z2K6 904 aa8.19□□□□□ -1.1
HMGN1P17-201ENST00000513734 ZNF654Q8IZM8 581 aa8.19□□□□□ -1.1
HMGN1P17-201ENST00000513734 CACTIN-AS1Q8N1I8 211 aa8.19□□□□□ -1.1
HMGN1P17-201ENST00000513734 CELF1Q92879 486 aaKnown RBP8.19□□□□□ -1.1
HMGN1P17-201ENST00000513734 ZNF775Q96BV0 537 aaPredicted RBP8.19□□□□□ -1.1
HMGN1P17-201ENST00000513734 GPR101Q96P66 508 aaPredicted RBP8.19□□□□□ -1.1
HMGN1P17-201ENST00000513734 NECAB3Q96P71 396 aaPredicted RBP8.19□□□□□ -1.1
HMGN1P17-201ENST00000513734 KBTBD4Q9NVX7 518 aa8.19□□□□□ -1.1
HMGN1P17-201ENST00000513734 DDX41Q9UJV9 622 aaKnown RBP8.19□□□□□ -1.1
HMGN1P17-201ENST00000513734 ATP6V0A2Q9Y487 856 aa8.19□□□□□ -1.1
HMGN1P17-201ENST00000513734 ENC1O14682 589 aa8.18□□□□□ -1.1
HMGN1P17-201ENST00000513734 PPIP5K2O43314 1243 aa8.18□□□□□ -1.1
HMGN1P17-201ENST00000513734 B3GALT4O96024 378 aa8.18□□□□□ -1.1
HMGN1P17-201ENST00000513734 CELA2BP08218 269 aaPredicted RBP8.18□□□□□ -1.1
HMGN1P17-201ENST00000513734 EPS15P42566 896 aa8.18□□□□□ -1.1
HMGN1P17-201ENST00000513734 RACK1P63244 317 aaKnown RBP8.18□□□□□ -1.1
HMGN1P17-201ENST00000513734 PPP2R3AQ06190 1150 aa8.18□□□□□ -1.1
HMGN1P17-201ENST00000513734 GRAPQ13588 217 aa8.18□□□□□ -1.1
HMGN1P17-201ENST00000513734 HSP90AB3PQ58FF7 597 aa8.18□□□□□ -1.1
HMGN1P17-201ENST00000513734 G2E3Q7L622 706 aa8.18□□□□□ -1.1
HMGN1P17-201ENST00000513734 RELL1Q8IUW5 271 aa8.18□□□□□ -1.1
HMGN1P17-201ENST00000513734 GRAPLQ8TC17 118 aaPredicted RBP8.18□□□□□ -1.1
HMGN1P17-201ENST00000513734 MYD88Q99836 296 aa8.18□□□□□ -1.1
HMGN1P17-201ENST00000513734 RSRP1Q9BUV0 290 aa8.18□□□□□ -1.1
HMGN1P17-201ENST00000513734 ACBD3Q9H3P7 528 aa8.18□□□□□ -1.1
HMGN1P17-201ENST00000513734 SRA1Q9HD15 236 aaKnown RBP8.18□□□□□ -1.1
HMGN1P17-201ENST00000513734 TMEM39AQ9NV64 488 aa8.18□□□□□ -1.1
HMGN1P17-201ENST00000513734 HYPKQ9NX55 129 aa8.18□□□□□ -1.1
HMGN1P17-201ENST00000513734 PASKQ96RG2 1323 aa8.18□□□□□ -1.1
HMGN1P17-201ENST00000513734 YDJCA8MPS7 323 aa8.17□□□□□ -1.1
HMGN1P17-201ENST00000513734 PAGE1O75459 146 aa8.17□□□□□ -1.1
HMGN1P17-201ENST00000513734 ESRRAP11474 423 aaPredicted RBP8.17□□□□□ -1.1
HMGN1P17-201ENST00000513734 GBP2P32456 591 aaPredicted RBP8.17□□□□□ -1.1
HMGN1P17-201ENST00000513734 EPHX2P34913 555 aa8.17□□□□□ -1.1
HMGN1P17-201ENST00000513734 NAALADL2Q58DX5 795 aa8.17□□□□□ -1.1
HMGN1P17-201ENST00000513734 MAP1SQ66K74 1059 aaPredicted RBP8.17□□□□□ -1.1
HMGN1P17-201ENST00000513734 TXNDC11Q6PKC3 985 aa8.17□□□□□ -1.1
HMGN1P17-201ENST00000513734 LDHDQ86WU2 507 aa8.17□□□□□ -1.1
HMGN1P17-201ENST00000513734 JMYQ8N9B5 988 aa8.17□□□□□ -1.1
HMGN1P17-201ENST00000513734 WHAMMQ8TF30 809 aa8.17□□□□□ -1.1
HMGN1P17-201ENST00000513734 RTFDC1Q9BY42 306 aaPredicted RBP8.17□□□□□ -1.1
HMGN1P17-201ENST00000513734 HACL1Q9UJ83 578 aa8.17□□□□□ -1.1
HMGN1P17-201ENST00000513734 PPME1Q9Y570 386 aa8.17□□□□□ -1.1
HMGN1P17-201ENST00000513734 THSD7BQ9C0I4 1608 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms