RNA–Protein interactions for RNA: ENST00000513636.1

ATP2C1-220, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-220ENST00000513636 CCNFP41002 786 aa6.34□□□□□ -1.39
ATP2C1-220ENST00000513636 CBX2Q14781 532 aaPredicted RBP6.34□□□□□ -1.39
ATP2C1-220ENST00000513636 RPTNQ6XPR3 784 aa6.34□□□□□ -1.39
ATP2C1-220ENST00000513636 RGS22Q8NE09 1264 aa6.34□□□□□ -1.39
ATP2C1-220ENST00000513636 DSCC1Q9BVC3 393 aa6.34□□□□□ -1.39
ATP2C1-220ENST00000513636 GFOD1Q9NXC2 390 aa6.34□□□□□ -1.39
ATP2C1-220ENST00000513636 IMPACTQ9P2X3 320 aa6.34□□□□□ -1.39
ATP2C1-220ENST00000513636 ACSL6Q9UKU0 697 aa6.34□□□□□ -1.39
ATP2C1-220ENST00000513636 MINPP1Q9UNW1 487 aa6.34□□□□□ -1.39
ATP2C1-220ENST00000513636 FAN1Q9Y2M0 1017 aa6.34□□□□□ -1.39
ATP2C1-220ENST00000513636 NACADO15069 1562 aa6.34□□□□□ -1.39
ATP2C1-220ENST00000513636 MYO15BQ96JP2 1530 aa6.34□□□□□ -1.39
ATP2C1-220ENST00000513636 POLR2BP30876 1174 aaKnown RBP6.33□□□□□ -1.4
ATP2C1-220ENST00000513636 BMP8BP34820 402 aa6.33□□□□□ -1.4
ATP2C1-220ENST00000513636 LIMS1P48059 325 aa6.33□□□□□ -1.4
ATP2C1-220ENST00000513636 MAPKAPK2P49137 400 aa6.33□□□□□ -1.4
ATP2C1-220ENST00000513636 ZNF200P98182 395 aaPredicted RBP6.33□□□□□ -1.4
ATP2C1-220ENST00000513636 RTP5Q14D33 572 aa6.33□□□□□ -1.4
ATP2C1-220ENST00000513636 HLA-DQA1Q5Y7H0 255 aa6.33□□□□□ -1.4
ATP2C1-220ENST00000513636 CWF19L1Q69YN2 538 aaKnown RBP6.33□□□□□ -1.4
ATP2C1-220ENST00000513636 SLCO6A1Q86UG4 719 aa6.33□□□□□ -1.4
ATP2C1-220ENST00000513636 ANTXR1Q9H6X2 564 aa6.33□□□□□ -1.4
ATP2C1-220ENST00000513636 TNFRSF12AQ9NP84 129 aa6.33□□□□□ -1.4
ATP2C1-220ENST00000513636 AP5S1Q9NUS5 200 aa6.33□□□□□ -1.4
ATP2C1-220ENST00000513636 ERVK13-1Q9NX77 482 aa6.33□□□□□ -1.4
ATP2C1-220ENST00000513636 DBR1Q9UK59 544 aaKnown RBP6.33□□□□□ -1.4
ATP2C1-220ENST00000513636 SUPT16HQ9Y5B9 1047 aaKnown RBP6.33□□□□□ -1.4
ATP2C1-220ENST00000513636 RB1CC1Q8TDY2 1594 aa6.32□□□□□ -1.4
ATP2C1-220ENST00000513636 K7ESM1 405 aa6.32□□□□□ -1.4
ATP2C1-220ENST00000513636 VAV1P15498 845 aa6.32□□□□□ -1.4
ATP2C1-220ENST00000513636 MCM4P33991 863 aa6.32□□□□□ -1.4
ATP2C1-220ENST00000513636 SLURP1P55000 103 aa6.32□□□□□ -1.4
ATP2C1-220ENST00000513636 PUM1Q14671 1186 aaKnown RBP eCLIP6.32□□□□□ -1.4
ATP2C1-220ENST00000513636 ZNF827Q17R98 1081 aa6.32□□□□□ -1.4
ATP2C1-220ENST00000513636 CDCP2Q5VXM1 449 aa6.32□□□□□ -1.4
ATP2C1-220ENST00000513636 OVOS1Q6IE37 1185 aa6.32□□□□□ -1.4
ATP2C1-220ENST00000513636 NLRC3Q7RTR2 1065 aa6.32□□□□□ -1.4
ATP2C1-220ENST00000513636 LSRQ86X29 649 aaPredicted RBP6.32□□□□□ -1.4
ATP2C1-220ENST00000513636 CNNM2Q9H8M5 875 aa6.32□□□□□ -1.4
ATP2C1-220ENST00000513636 SUSD2Q9UGT4 822 aa6.32□□□□□ -1.4
ATP2C1-220ENST00000513636 FFAR3O14843 346 aa6.31□□□□□ -1.4
ATP2C1-220ENST00000513636 ATE1O95260 518 aa6.31□□□□□ -1.4
ATP2C1-220ENST00000513636 CAP1Q01518 475 aa6.31□□□□□ -1.4
ATP2C1-220ENST00000513636 EFEMP1Q12805 493 aa6.31□□□□□ -1.4
ATP2C1-220ENST00000513636 LRRFIP1Q32MZ4 808 aaKnown RBP6.31□□□□□ -1.4
ATP2C1-220ENST00000513636 PLEKHN1Q494U1 663 aaPredicted RBP6.31□□□□□ -1.4
ATP2C1-220ENST00000513636 BICRALQ6AI39 1079 aa6.31□□□□□ -1.4
ATP2C1-220ENST00000513636 USP48Q86UV5 1035 aa6.31□□□□□ -1.4
ATP2C1-220ENST00000513636 TP53I13Q8NBR0 393 aaPredicted RBP6.31□□□□□ -1.4
ATP2C1-220ENST00000513636 ATG4CQ96DT6 458 aa6.31□□□□□ -1.4
ATP2C1-220ENST00000513636 KBTBD4Q9NVX7 518 aa6.31□□□□□ -1.4
ATP2C1-220ENST00000513636 ZNF205O95201 554 aa6.3□□□□□ -1.4
ATP2C1-220ENST00000513636 GSNP06396 782 aa6.3□□□□□ -1.4
ATP2C1-220ENST00000513636 GSTM1P09488 218 aa6.3□□□□□ -1.4
ATP2C1-220ENST00000513636 EIF4A3P38919 411 aaKnown RBP6.3□□□□□ -1.4
ATP2C1-220ENST00000513636 NT5DC1Q5TFE4 455 aa6.3□□□□□ -1.4
ATP2C1-220ENST00000513636 FBXL19Q6PCT2 694 aa6.3□□□□□ -1.4
ATP2C1-220ENST00000513636 PAQR3Q6TCH7 311 aa6.3□□□□□ -1.4
ATP2C1-220ENST00000513636 GK5Q6ZS86 529 aa6.3□□□□□ -1.4
ATP2C1-220ENST00000513636 JMJD8Q96S16 334 aa6.3□□□□□ -1.4
ATP2C1-220ENST00000513636 MYRFQ9Y2G1 1151 aa6.3□□□□□ -1.4
ATP2C1-220ENST00000513636 PMF1-BGLAPU3KQ54 211 aa6.3□□□□□ -1.4
ATP2C1-220ENST00000513636 PRICKLE3O43900 615 aaPredicted RBP6.29□□□□□ -1.4
ATP2C1-220ENST00000513636 NOP2P46087 812 aaKnown RBP6.29□□□□□ -1.4
ATP2C1-220ENST00000513636 KRTAP10-2P60368 255 aa6.29□□□□□ -1.4
ATP2C1-220ENST00000513636 FOXO4P98177 505 aa6.29□□□□□ -1.4
ATP2C1-220ENST00000513636 AUHQ13825 339 aaKnown RBP6.29□□□□□ -1.4
ATP2C1-220ENST00000513636 NOL9Q5SY16 702 aaKnown RBP6.29□□□□□ -1.4
ATP2C1-220ENST00000513636 ZFYVE27Q5T4F4 411 aa6.29□□□□□ -1.4
ATP2C1-220ENST00000513636 CRTC3Q6UUV7 619 aa6.29□□□□□ -1.4
ATP2C1-220ENST00000513636 DHRS1Q96LJ7 313 aa6.29□□□□□ -1.4
ATP2C1-220ENST00000513636 SLC6A18Q96N87 628 aa6.29□□□□□ -1.4
ATP2C1-220ENST00000513636 CNOT11Q9UKZ1 510 aaKnown RBP6.29□□□□□ -1.4
ATP2C1-220ENST00000513636 UNC13AQ9UPW8 1703 aa6.29□□□□□ -1.4
ATP2C1-220ENST00000513636 IRS2Q9Y4H2 1338 aa6.28□□□□□ -1.4
ATP2C1-220ENST00000513636 F8W031 263 aaPredicted RBP6.28□□□□□ -1.4
ATP2C1-220ENST00000513636 CYBBP04839 570 aa6.28□□□□□ -1.4
ATP2C1-220ENST00000513636 MSL3P1P0C860 447 aa6.28□□□□□ -1.4
ATP2C1-220ENST00000513636 GARTP22102 1010 aa6.28□□□□□ -1.4
ATP2C1-220ENST00000513636 ZNF165P49910 485 aa6.28□□□□□ -1.4
ATP2C1-220ENST00000513636 SEZ6Q53EL9 994 aa6.28□□□□□ -1.4
ATP2C1-220ENST00000513636 FERMT3Q86UX7 667 aa6.28□□□□□ -1.4
ATP2C1-220ENST00000513636 SPATA25Q9BR10 227 aa6.28□□□□□ -1.4
ATP2C1-220ENST00000513636 LRRC3Q9BY71 257 aa6.28□□□□□ -1.4
ATP2C1-220ENST00000513636 EHMT1Q9H9B1 1298 aa6.28□□□□□ -1.4
ATP2C1-220ENST00000513636 PRR13Q9NZ81 148 aa6.28□□□□□ -1.4
ATP2C1-220ENST00000513636 CTSKP43235 329 aa6.27□□□□□ -1.41
ATP2C1-220ENST00000513636 MVKQ03426 396 aa6.27□□□□□ -1.41
ATP2C1-220ENST00000513636 HHIPL2Q6UWX4 724 aa6.27□□□□□ -1.41
ATP2C1-220ENST00000513636 SND1Q7KZF4 910 aaKnown RBP eCLIP6.27□□□□□ -1.41
ATP2C1-220ENST00000513636 TMEM192Q8IY95 271 aa6.27□□□□□ -1.41
ATP2C1-220ENST00000513636 CCDC144CPQ8IYA2 1237 aa6.27□□□□□ -1.41
ATP2C1-220ENST00000513636 ZNF296Q8WUU4 475 aaPredicted RBP6.27□□□□□ -1.41
ATP2C1-220ENST00000513636 PDLIM7Q9NR12 457 aa6.27□□□□□ -1.41
ATP2C1-220ENST00000513636 NCAM1P13591 858 aa6.26□□□□□ -1.41
ATP2C1-220ENST00000513636 NME1P15531 152 aaKnown RBP6.26□□□□□ -1.41
ATP2C1-220ENST00000513636 IGFBP6P24592 240 aaPredicted RBP6.26□□□□□ -1.41
ATP2C1-220ENST00000513636 APOBRQ0VD83 1088 aa6.26□□□□□ -1.41
ATP2C1-220ENST00000513636 CYP2R1Q6VVX0 501 aa6.26□□□□□ -1.41
ATP2C1-220ENST00000513636 LIPIQ6XZB0 460 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms