RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 VAT1LQ9HCJ6 419 aa19.15■□□□□ 0.66
HMGCL-209ENST00000513148 CHMP5Q9NZZ3 219 aa19.15■□□□□ 0.66
HMGCL-209ENST00000513148 ZNF214Q9UL59 606 aaPredicted RBP19.15■□□□□ 0.66
HMGCL-209ENST00000513148 FMNL1O95466 1100 aaPredicted RBP19.14■□□□□ 0.65
HMGCL-209ENST00000513148 CALM1P0DP23 149 aa19.14■□□□□ 0.65
HMGCL-209ENST00000513148 CALM2P0DP24 149 aa19.14■□□□□ 0.65
HMGCL-209ENST00000513148 CALM3P0DP25 149 aa19.14■□□□□ 0.65
HMGCL-209ENST00000513148 SNRNP48Q6IEG0 339 aaKnown RBP19.14■□□□□ 0.65
HMGCL-209ENST00000513148 NOL8Q76FK4 1167 aaKnown RBP19.14■□□□□ 0.65
HMGCL-209ENST00000513148 MAP7D2Q96T17 732 aa19.14■□□□□ 0.65
HMGCL-209ENST00000513148 KIF2CQ99661 725 aa19.14■□□□□ 0.65
HMGCL-209ENST00000513148 MOV10L1Q9BXT6 1211 aaKnown RBP19.14■□□□□ 0.65
HMGCL-209ENST00000513148 AGXT2Q9BYV1 514 aa19.14■□□□□ 0.65
HMGCL-209ENST00000513148 CWC22Q9HCG8 908 aaKnown RBP19.14■□□□□ 0.65
HMGCL-209ENST00000513148 DDX11L8A8MPP1 907 aa19.13■□□□□ 0.65
HMGCL-209ENST00000513148 KIF5BP33176 963 aa19.13■□□□□ 0.65
HMGCL-209ENST00000513148 CCNA1P78396 465 aa19.13■□□□□ 0.65
HMGCL-209ENST00000513148 ADGRF4Q8IZF3 695 aa19.13■□□□□ 0.65
HMGCL-209ENST00000513148 CMTR1Q8N1G2 835 aaKnown RBP19.13■□□□□ 0.65
HMGCL-209ENST00000513148 TRIM47Q96LD4 638 aa19.13■□□□□ 0.65
HMGCL-209ENST00000513148 MYH6P13533 1939 aa19.13■□□□□ 0.65
HMGCL-209ENST00000513148 GOLGA8AA7E2F4 631 aa19.13■□□□□ 0.65
HMGCL-209ENST00000513148 TRAK2O60296 914 aa19.13■□□□□ 0.65
HMGCL-209ENST00000513148 TAL1P17542 331 aaPredicted RBP19.13■□□□□ 0.65
HMGCL-209ENST00000513148 STAT3P40763 770 aa19.13■□□□□ 0.65
HMGCL-209ENST00000513148 FCGRTP55899 365 aa19.13■□□□□ 0.65
HMGCL-209ENST00000513148 NBPF11Q86T75 865 aa19.13■□□□□ 0.65
HMGCL-209ENST00000513148 NCAPG2Q86XI2 1143 aa19.13■□□□□ 0.65
HMGCL-209ENST00000513148 FBXL16Q8N461 479 aa19.13■□□□□ 0.65
HMGCL-209ENST00000513148 FANCBQ8NB91 859 aa19.13■□□□□ 0.65
HMGCL-209ENST00000513148 GRPEL1Q9HAV7 217 aa19.13■□□□□ 0.65
HMGCL-209ENST00000513148 TNPO2O14787 897 aaKnown RBP19.12■□□□□ 0.65
HMGCL-209ENST00000513148 PLEKHA8P1O95397 391 aa19.12■□□□□ 0.65
HMGCL-209ENST00000513148 PTMSP20962 102 aa19.12■□□□□ 0.65
HMGCL-209ENST00000513148 PIBF1Q8WXW3 757 aa19.12■□□□□ 0.65
HMGCL-209ENST00000513148 AGBL1Q96MI9 1066 aa19.12■□□□□ 0.65
HMGCL-209ENST00000513148 TEX13BQ9BXU2 312 aa19.12■□□□□ 0.65
HMGCL-209ENST00000513148 SLKQ9H2G2 1235 aaPredicted RBP19.12■□□□□ 0.65
HMGCL-209ENST00000513148 RANBP17Q9H2T7 1088 aaKnown RBP19.12■□□□□ 0.65
HMGCL-209ENST00000513148 TRIM17Q9Y577 477 aa19.12■□□□□ 0.65
HMGCL-209ENST00000513148 BAZ2BQ9UIF8 2168 aaKnown RBP19.12■□□□□ 0.65
HMGCL-209ENST00000513148 ERCC3P19447 782 aa19.12■□□□□ 0.65
HMGCL-209ENST00000513148 METAP2P50579 478 aaKnown RBP eCLIP19.12■□□□□ 0.65
HMGCL-209ENST00000513148 AK2P54819 239 aa19.12■□□□□ 0.65
HMGCL-209ENST00000513148 CDC37Q16543 378 aaPredicted RBP19.12■□□□□ 0.65
HMGCL-209ENST00000513148 RTN1Q16799 776 aa19.12■□□□□ 0.65
HMGCL-209ENST00000513148 HOMER1Q86YM7 354 aa19.12■□□□□ 0.65
HMGCL-209ENST00000513148 CCDC82Q8N4S0 544 aa19.12■□□□□ 0.65
HMGCL-209ENST00000513148 MAP3K14Q99558 947 aa19.12■□□□□ 0.65
HMGCL-209ENST00000513148 PRDM10Q9NQV6 1147 aa19.12■□□□□ 0.65
HMGCL-209ENST00000513148 HOMER2Q9NSB8 354 aa19.12■□□□□ 0.65
HMGCL-209ENST00000513148 FDX1P10109 184 aa19.11■□□□□ 0.65
HMGCL-209ENST00000513148 SLC35G1Q2M3R5 365 aa19.11■□□□□ 0.65
HMGCL-209ENST00000513148 JMJD4Q9H9V9 463 aa19.11■□□□□ 0.65
HMGCL-209ENST00000513148 RIPK3Q9Y572 518 aa19.11■□□□□ 0.65
HMGCL-209ENST00000513148 ZNF536O15090 1300 aa19.11■□□□□ 0.65
HMGCL-209ENST00000513148 PLXNB2O15031 1838 aa19.11■□□□□ 0.65
HMGCL-209ENST00000513148 MAPK4P31152 587 aa19.1■□□□□ 0.65
HMGCL-209ENST00000513148 STK3Q13188 491 aa19.1■□□□□ 0.65
HMGCL-209ENST00000513148 GPR142Q7Z601 462 aa19.1■□□□□ 0.65
HMGCL-209ENST00000513148 PANK2Q9BZ23 570 aa19.1■□□□□ 0.65
HMGCL-209ENST00000513148 CCPG1Q9ULG6 757 aa19.1■□□□□ 0.65
HMGCL-209ENST00000513148 HPS5Q9UPZ3 1129 aa19.1■□□□□ 0.65
HMGCL-209ENST00000513148 DOCK3Q8IZD9 2030 aa19.1■□□□□ 0.65
HMGCL-209ENST00000513148 CYTH3O43739 400 aa19.1■□□□□ 0.65
HMGCL-209ENST00000513148 OTOP1Q7RTM1 612 aa19.1■□□□□ 0.65
HMGCL-209ENST00000513148 RIOX2Q8IUF8 465 aa19.1■□□□□ 0.65
HMGCL-209ENST00000513148 SMCHD1A6NHR9 2005 aa19.1■□□□□ 0.65
HMGCL-209ENST00000513148 ALAS1P13196 640 aa19.09■□□□□ 0.65
HMGCL-209ENST00000513148 PDIA3P30101 505 aaKnown RBP19.09■□□□□ 0.65
HMGCL-209ENST00000513148 CDC27P30260 824 aa19.09■□□□□ 0.65
HMGCL-209ENST00000513148 OAZ1P54368 228 aa19.09■□□□□ 0.65
HMGCL-209ENST00000513148 CCT2P78371 535 aaKnown RBP19.09■□□□□ 0.65
HMGCL-209ENST00000513148 USH1GQ495M9 461 aa19.09■□□□□ 0.65
HMGCL-209ENST00000513148 SRBD1Q8N5C6 995 aaKnown RBP19.09■□□□□ 0.65
HMGCL-209ENST00000513148 COA7Q96BR5 231 aa19.09■□□□□ 0.65
HMGCL-209ENST00000513148 NCOA5Q9HCD5 579 aaKnown RBP19.09■□□□□ 0.65
HMGCL-209ENST00000513148 HTTP42858 3142 aa19.09■□□□□ 0.65
HMGCL-209ENST00000513148 CENPFP49454 3210 aa19.09■□□□□ 0.65
HMGCL-209ENST00000513148 ATP2A1O14983 1001 aa19.08■□□□□ 0.65
HMGCL-209ENST00000513148 SLC25A27O95847 323 aa19.08■□□□□ 0.65
HMGCL-209ENST00000513148 ICAM1P05362 532 aa19.08■□□□□ 0.65
HMGCL-209ENST00000513148 GNAQP50148 359 aa19.08■□□□□ 0.65
HMGCL-209ENST00000513148 ARHGEF6Q15052 776 aa19.08■□□□□ 0.65
HMGCL-209ENST00000513148 QRICH1Q2TAL8 776 aa19.08■□□□□ 0.65
HMGCL-209ENST00000513148 TMTC3Q6ZXV5 915 aa19.08■□□□□ 0.65
HMGCL-209ENST00000513148 PLEKHH3Q7Z736 793 aa19.08■□□□□ 0.65
HMGCL-209ENST00000513148 PIGSQ96S52 555 aa19.08■□□□□ 0.65
HMGCL-209ENST00000513148 RBM28Q9NW13 759 aaKnown RBP19.08■□□□□ 0.65
HMGCL-209ENST00000513148 TPCN1Q9ULQ1 816 aa19.08■□□□□ 0.65
HMGCL-209ENST00000513148 IVNS1ABPQ9Y6Y0 642 aa19.08■□□□□ 0.65
HMGCL-209ENST00000513148 ADD1P35611 737 aaKnown RBP19.08■□□□□ 0.64
HMGCL-209ENST00000513148 EVCP57679 992 aa19.08■□□□□ 0.64
HMGCL-209ENST00000513148 PRKCZQ05513 592 aa19.08■□□□□ 0.64
HMGCL-209ENST00000513148 ANKRD1Q15327 319 aa19.08■□□□□ 0.64
HMGCL-209ENST00000513148 CTU1Q7Z7A3 348 aaKnown RBP19.08■□□□□ 0.64
HMGCL-209ENST00000513148 SHCBP1Q8NEM2 672 aa19.08■□□□□ 0.64
HMGCL-209ENST00000513148 TRIM44Q96DX7 344 aaPredicted RBP19.08■□□□□ 0.64
HMGCL-209ENST00000513148 RIOX1Q9H6W3 641 aa19.08■□□□□ 0.64
HMGCL-209ENST00000513148 GABRQQ9UN88 632 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms