RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 LINC01553A4QN01 128 aa11.63□□□□□ -0.55
CLCN3-208ENST00000512813 STXBP3O00186 592 aa11.63□□□□□ -0.55
CLCN3-208ENST00000512813 MBTPS2O43462 519 aa11.63□□□□□ -0.55
CLCN3-208ENST00000512813 SLC25A27O95847 323 aa11.63□□□□□ -0.55
CLCN3-208ENST00000512813 SNAI1O95863 264 aaPredicted RBP11.63□□□□□ -0.55
CLCN3-208ENST00000512813 KCNJ6P48051 423 aa11.63□□□□□ -0.55
CLCN3-208ENST00000512813 CXCL17Q6UXB2 119 aa11.63□□□□□ -0.55
CLCN3-208ENST00000512813 EP400NLQ6ZTU2 488 aa11.63□□□□□ -0.55
CLCN3-208ENST00000512813 KLHDC4Q8TBB5 520 aa11.63□□□□□ -0.55
CLCN3-208ENST00000512813 ACER1Q8TDN7 264 aa11.63□□□□□ -0.55
CLCN3-208ENST00000512813 SIL1Q9H173 461 aa11.63□□□□□ -0.55
CLCN3-208ENST00000512813 FOCADQ5VW36 1801 aa11.63□□□□□ -0.55
CLCN3-208ENST00000512813 LTBRP36941 435 aa11.62□□□□□ -0.55
CLCN3-208ENST00000512813 SMAD4Q13485 552 aaKnown RBP11.62□□□□□ -0.55
CLCN3-208ENST00000512813 RASGRF1Q13972 1273 aa11.62□□□□□ -0.55
CLCN3-208ENST00000512813 PTPROQ16827 1216 aa11.62□□□□□ -0.55
CLCN3-208ENST00000512813 TWISTNBQ3B726 338 aaPredicted RBP11.62□□□□□ -0.55
CLCN3-208ENST00000512813 ANKRD44Q8N8A2 993 aa11.62□□□□□ -0.55
CLCN3-208ENST00000512813 BANK1Q8NDB2 785 aa11.62□□□□□ -0.55
CLCN3-208ENST00000512813 FBXO22Q8NEZ5 403 aa11.62□□□□□ -0.55
CLCN3-208ENST00000512813 BICC1Q9H694 974 aaKnown RBP11.62□□□□□ -0.55
CLCN3-208ENST00000512813 CLDND1Q9NY35 253 aa11.62□□□□□ -0.55
CLCN3-208ENST00000512813 DLL3Q9NYJ7 618 aa11.62□□□□□ -0.55
CLCN3-208ENST00000512813 RALYQ9UKM9 306 aaKnown RBP11.62□□□□□ -0.55
CLCN3-208ENST00000512813 EYA2O00167 538 aa11.61□□□□□ -0.55
CLCN3-208ENST00000512813 ALDH1L1O75891 902 aa11.61□□□□□ -0.55
CLCN3-208ENST00000512813 LDHCP07864 332 aa11.61□□□□□ -0.55
CLCN3-208ENST00000512813 WDR5P61964 334 aaKnown RBP11.61□□□□□ -0.55
CLCN3-208ENST00000512813 GSTO1P78417 241 aa11.61□□□□□ -0.55
CLCN3-208ENST00000512813 ATP2B3Q16720 1220 aa11.61□□□□□ -0.55
CLCN3-208ENST00000512813 CCDC144BQ3MJ40 725 aa11.61□□□□□ -0.55
CLCN3-208ENST00000512813 TCEAL5Q5H9L2 206 aa11.61□□□□□ -0.55
CLCN3-208ENST00000512813 MAMDC4Q6UXC1 1216 aa11.61□□□□□ -0.55
CLCN3-208ENST00000512813 ERICH6Q7L0X2 663 aa11.61□□□□□ -0.55
CLCN3-208ENST00000512813 RPAINQ86UA6 219 aa11.61□□□□□ -0.55
CLCN3-208ENST00000512813 TET1Q8NFU7 2136 aa11.61□□□□□ -0.55
CLCN3-208ENST00000512813 ZBED2Q9BTP6 218 aa11.61□□□□□ -0.55
CLCN3-208ENST00000512813 TANGO6Q9C0B7 1094 aa11.61□□□□□ -0.55
CLCN3-208ENST00000512813 FLT1P17948 1338 aa11.6□□□□□ -0.55
CLCN3-208ENST00000512813 PARP14Q460N5 1801 aa11.6□□□□□ -0.55
CLCN3-208ENST00000512813 NCK2O43639 380 aa11.6□□□□□ -0.55
CLCN3-208ENST00000512813 GJB5O95377 273 aa11.6□□□□□ -0.55
CLCN3-208ENST00000512813 NBPF7P0C2Y1 421 aaPredicted RBP11.6□□□□□ -0.55
CLCN3-208ENST00000512813 BEX3Q00994 111 aa11.6□□□□□ -0.55
CLCN3-208ENST00000512813 ACVR2BQ13705 512 aa11.6□□□□□ -0.55
CLCN3-208ENST00000512813 CBX2Q14781 532 aaPredicted RBP11.6□□□□□ -0.55
CLCN3-208ENST00000512813 RAB3GAP1Q15042 981 aa11.6□□□□□ -0.55
CLCN3-208ENST00000512813 CTC1Q2NKJ3 1217 aa11.6□□□□□ -0.55
CLCN3-208ENST00000512813 TMCO2Q7Z6W1 182 aaPredicted RBP11.6□□□□□ -0.55
CLCN3-208ENST00000512813 SH3RF3Q8TEJ3 882 aaPredicted RBP11.6□□□□□ -0.55
CLCN3-208ENST00000512813 NSUN4Q96CB9 384 aaKnown RBP11.6□□□□□ -0.55
CLCN3-208ENST00000512813 RAD9AQ99638 391 aa11.6□□□□□ -0.55
CLCN3-208ENST00000512813 ALDH8A1Q9H2A2 487 aaPredicted RBP11.6□□□□□ -0.55
CLCN3-208ENST00000512813 NSUN3Q9H649 340 aaKnown RBP11.6□□□□□ -0.55
CLCN3-208ENST00000512813 UNC79Q9P2D8 2635 aa11.6□□□□□ -0.55
CLCN3-208ENST00000512813 LOC730098B7Z3J9 87 aa11.59□□□□□ -0.55
CLCN3-208ENST00000512813 SUPT20HL2P0C7V6 817 aa11.59□□□□□ -0.55
CLCN3-208ENST00000512813 CYP2C9P11712 490 aa11.59□□□□□ -0.55
CLCN3-208ENST00000512813 TMEM132BQ14DG7 1078 aa11.59□□□□□ -0.55
CLCN3-208ENST00000512813 CLUL1Q15846 466 aa11.59□□□□□ -0.55
CLCN3-208ENST00000512813 CCDC102BQ68D86 513 aa11.59□□□□□ -0.55
CLCN3-208ENST00000512813 TATDN1Q6P1N9 297 aa11.59□□□□□ -0.55
CLCN3-208ENST00000512813 RIOX2Q8IUF8 465 aa11.59□□□□□ -0.55
CLCN3-208ENST00000512813 ATG4CQ96DT6 458 aa11.59□□□□□ -0.55
CLCN3-208ENST00000512813 FTOQ9C0B1 505 aaKnown RBP eCLIP11.59□□□□□ -0.552e-7■□□□□ 9
CLCN3-208ENST00000512813 PALD1Q9ULE6 856 aa11.59□□□□□ -0.55
CLCN3-208ENST00000512813 OTOGLQ3ZCN5 2332 aa11.59□□□□□ -0.55
CLCN3-208ENST00000512813 PITPNM1O00562 1244 aa11.58□□□□□ -0.56
CLCN3-208ENST00000512813 DEFB103AP81534 67 aa11.58□□□□□ -0.56
CLCN3-208ENST00000512813 ATF7IPQ6VMQ6 1270 aa11.58□□□□□ -0.56
CLCN3-208ENST00000512813 MAPKAPK5Q8IW41 473 aa11.58□□□□□ -0.56
CLCN3-208ENST00000512813 KIAA2013Q8IYS2 634 aa11.58□□□□□ -0.56
CLCN3-208ENST00000512813 TSR2Q969E8 191 aaKnown RBP11.58□□□□□ -0.56
CLCN3-208ENST00000512813 C17orf80Q9BSJ5 609 aa11.58□□□□□ -0.56
CLCN3-208ENST00000512813 ABHD16BQ9H3Z7 469 aa11.58□□□□□ -0.56
CLCN3-208ENST00000512813 TRMT13Q9NUP7 481 aaKnown RBP11.58□□□□□ -0.56
CLCN3-208ENST00000512813 GCN1Q92616 2671 aaKnown RBP11.58□□□□□ -0.56
CLCN3-208ENST00000512813 ASTN1O14525 1302 aa11.58□□□□□ -0.56
CLCN3-208ENST00000512813 PDGFBP01127 241 aaPredicted RBP11.57□□□□□ -0.56
CLCN3-208ENST00000512813 HLA-DOAP06340 250 aa11.57□□□□□ -0.56
CLCN3-208ENST00000512813 IQCF3P0C7M6 154 aa11.57□□□□□ -0.56
CLCN3-208ENST00000512813 HOXB3P14651 431 aaPredicted RBP11.57□□□□□ -0.56
CLCN3-208ENST00000512813 COPB2P35606 906 aa11.57□□□□□ -0.56
CLCN3-208ENST00000512813 DLX2Q07687 328 aaPredicted RBP11.57□□□□□ -0.56
CLCN3-208ENST00000512813 ATG9AQ7Z3C6 839 aa11.57□□□□□ -0.56
CLCN3-208ENST00000512813 ZNF467Q7Z7K2 595 aaPredicted RBP11.57□□□□□ -0.56
CLCN3-208ENST00000512813 MAGEB6Q8N7X4 407 aa11.57□□□□□ -0.56
CLCN3-208ENST00000512813 RIPOR3Q96MK2 946 aa11.57□□□□□ -0.56
CLCN3-208ENST00000512813 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.57□□□□□ -0.56
CLCN3-208ENST00000512813 ASH1LQ9NR48 2969 aaKnown RBP11.57□□□□□ -0.56
CLCN3-208ENST00000512813 MYO7AQ13402 2215 aa11.56□□□□□ -0.56
CLCN3-208ENST00000512813 MCM3APO60318 1980 aa11.56□□□□□ -0.56
CLCN3-208ENST00000512813 DNAJC25-GNG10A0A024R161 153 aa11.56□□□□□ -0.56
CLCN3-208ENST00000512813 FLOT1O75955 427 aa11.56□□□□□ -0.56
CLCN3-208ENST00000512813 PSMC6P62333 389 aa11.56□□□□□ -0.56
CLCN3-208ENST00000512813 FSCN1Q16658 493 aaKnown RBP11.56□□□□□ -0.56
CLCN3-208ENST00000512813 ABCB5Q2M3G0 1257 aa11.56□□□□□ -0.56
CLCN3-208ENST00000512813 TMEM105Q8N8V8 129 aa11.56□□□□□ -0.56
CLCN3-208ENST00000512813 CRBNQ96SW2 442 aa11.56□□□□□ -0.56
CLCN3-208ENST00000512813 SRCIN1Q9C0H9 1055 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms