RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 ANKRD39Q53RE8 183 aa4.04□□□□□ -1.76
PDGFC-208ENST00000512711 CIAPIN1Q6FI81 312 aa4.04□□□□□ -1.76
PDGFC-208ENST00000512711 SLCO6A1Q86UG4 719 aa4.04□□□□□ -1.76
PDGFC-208ENST00000512711 RBBP8NLQ8NC74 664 aaPredicted RBP4.04□□□□□ -1.76
PDGFC-208ENST00000512711 DHRS1Q96LJ7 313 aa4.04□□□□□ -1.76
PDGFC-208ENST00000512711 FCRL3Q96P31 734 aaPredicted RBP4.04□□□□□ -1.76
PDGFC-208ENST00000512711 JMJD8Q96S16 334 aa4.04□□□□□ -1.76
PDGFC-208ENST00000512711 GP6Q9HCN6 339 aa4.04□□□□□ -1.76
PDGFC-208ENST00000512711 EPB41L4AQ9HCS5 686 aaPredicted RBP4.04□□□□□ -1.76
PDGFC-208ENST00000512711 CRTAC1Q9NQ79 661 aa4.04□□□□□ -1.76
PDGFC-208ENST00000512711 METTL5Q9NRN9 209 aaKnown RBP4.04□□□□□ -1.76
PDGFC-208ENST00000512711 KLHL14Q9P2G3 628 aa4.04□□□□□ -1.76
PDGFC-208ENST00000512711 PCDHB10Q9UN67 800 aa4.04□□□□□ -1.76
PDGFC-208ENST00000512711 UNCXA6NJT0 531 aa4.03□□□□□ -1.76
PDGFC-208ENST00000512711 CD247P20963 164 aa4.03□□□□□ -1.76
PDGFC-208ENST00000512711 GUCY2CP25092 1073 aa4.03□□□□□ -1.76
PDGFC-208ENST00000512711 YBX1P67809 324 aaKnown RBP4.03□□□□□ -1.76
PDGFC-208ENST00000512711 MVKQ03426 396 aa4.03□□□□□ -1.76
PDGFC-208ENST00000512711 NOL9Q5SY16 702 aaKnown RBP4.03□□□□□ -1.76
PDGFC-208ENST00000512711 LSRQ86X29 649 aaPredicted RBP4.03□□□□□ -1.76
PDGFC-208ENST00000512711 FCRL2Q96LA5 508 aaPredicted RBP4.03□□□□□ -1.76
PDGFC-208ENST00000512711 C20orf173Q96LM9 149 aa4.03□□□□□ -1.76
PDGFC-208ENST00000512711 TM9SF2Q99805 663 aa4.03□□□□□ -1.76
PDGFC-208ENST00000512711 MCMBPQ9BTE3 642 aa4.03□□□□□ -1.76
PDGFC-208ENST00000512711 DSCC1Q9BVC3 393 aa4.03□□□□□ -1.76
PDGFC-208ENST00000512711 KIAA1522Q9P206 1035 aaPredicted RBP4.03□□□□□ -1.76
PDGFC-208ENST00000512711 ZNF214Q9UL59 606 aaPredicted RBP4.03□□□□□ -1.76
PDGFC-208ENST00000512711 CNOT6Q9ULM6 557 aaKnown RBP4.03□□□□□ -1.76
PDGFC-208ENST00000512711 EFR3BQ9Y2G0 817 aa4.03□□□□□ -1.76
PDGFC-208ENST00000512711 KCTD3Q9Y597 815 aa4.03□□□□□ -1.76
PDGFC-208ENST00000512711 WTIPA6NIX2 430 aaPredicted RBP4.02□□□□□ -1.77
PDGFC-208ENST00000512711 SCAMP3O14828 347 aaKnown RBP4.02□□□□□ -1.77
PDGFC-208ENST00000512711 CBFA2T2O43439 604 aa4.02□□□□□ -1.77
PDGFC-208ENST00000512711 SEMA7AO75326 666 aa4.02□□□□□ -1.77
PDGFC-208ENST00000512711 GSNP06396 782 aa4.02□□□□□ -1.77
PDGFC-208ENST00000512711 NCKAP1LP55160 1127 aa4.02□□□□□ -1.77
PDGFC-208ENST00000512711 ERVFRD-1P60508 538 aa4.02□□□□□ -1.77
PDGFC-208ENST00000512711 CYP4F8P98187 520 aa4.02□□□□□ -1.77
PDGFC-208ENST00000512711 HDLBPQ00341 1268 aaKnown RBP4.02□□□□□ -1.77
PDGFC-208ENST00000512711 TRIM26Q12899 539 aaPredicted RBP4.02□□□□□ -1.77
PDGFC-208ENST00000512711 VMACQ2NL98 169 aa4.02□□□□□ -1.77
PDGFC-208ENST00000512711 GALNT18Q6P9A2 607 aa4.02□□□□□ -1.77
PDGFC-208ENST00000512711 FIBCD1Q8N539 461 aa4.02□□□□□ -1.77
PDGFC-208ENST00000512711 TAB3Q8N5C8 712 aaPredicted RBP4.02□□□□□ -1.77
PDGFC-208ENST00000512711 SIRT5Q9NXA8 310 aa4.02□□□□□ -1.77
PDGFC-208ENST00000512711 IMPACTQ9P2X3 320 aa4.02□□□□□ -1.77
PDGFC-208ENST00000512711 RAPGEFL1Q9UHV5 662 aa4.02□□□□□ -1.77
PDGFC-208ENST00000512711 ACSL6Q9UKU0 697 aa4.02□□□□□ -1.77
PDGFC-208ENST00000512711 PLA2G2DQ9UNK4 145 aa4.02□□□□□ -1.77
PDGFC-208ENST00000512711 HCFC2Q9Y5Z7 792 aa4.02□□□□□ -1.77
PDGFC-208ENST00000512711 A0A1W2PQ45 241 aaPredicted RBP4.01□□□□□ -1.77
PDGFC-208ENST00000512711 A0A1W2PQY0 241 aa4.01□□□□□ -1.77
PDGFC-208ENST00000512711 NUDT19A8MXV4 375 aa4.01□□□□□ -1.77
PDGFC-208ENST00000512711 PPP1R11O60927 126 aaPredicted RBP4.01□□□□□ -1.77
PDGFC-208ENST00000512711 VAMP4O75379 141 aa4.01□□□□□ -1.77
PDGFC-208ENST00000512711 INHBBP09529 407 aa4.01□□□□□ -1.77
PDGFC-208ENST00000512711 IMPDH2P12268 514 aa4.01□□□□□ -1.77
PDGFC-208ENST00000512711 IFNGR1P15260 489 aa4.01□□□□□ -1.77
PDGFC-208ENST00000512711 BMP7P18075 431 aa4.01□□□□□ -1.77
PDGFC-208ENST00000512711 PI3P19957 117 aa4.01□□□□□ -1.77
PDGFC-208ENST00000512711 CDR1P51861 262 aa4.01□□□□□ -1.77
PDGFC-208ENST00000512711 PPP2R5DQ14738 602 aa4.01□□□□□ -1.77
PDGFC-208ENST00000512711 NT5DC4Q86YG4 428 aa4.01□□□□□ -1.77
PDGFC-208ENST00000512711 IGDCC3Q8IVU1 814 aa4.01□□□□□ -1.77
PDGFC-208ENST00000512711 TMEFF1Q8IYR6 380 aa4.01□□□□□ -1.77
PDGFC-208ENST00000512711 ZNF654Q8IZM8 581 aa4.01□□□□□ -1.77
PDGFC-208ENST00000512711 NUP43Q8NFH3 380 aa4.01□□□□□ -1.77
PDGFC-208ENST00000512711 ADCY4Q8NFM4 1077 aa4.01□□□□□ -1.77
PDGFC-208ENST00000512711 NOL6Q9H6R4 1146 aaKnown RBP4.01□□□□□ -1.77
PDGFC-208ENST00000512711 TAF6LQ9Y6J9 622 aa4.01□□□□□ -1.77
PDGFC-208ENST00000512711 A0A1W2PQH9 124 aa4□□□□□ -1.77
PDGFC-208ENST00000512711 N4BP3O15049 544 aa4□□□□□ -1.77
PDGFC-208ENST00000512711 FGF10O15520 208 aaPredicted RBP4□□□□□ -1.77
PDGFC-208ENST00000512711 MPOP05164 745 aa4□□□□□ -1.77
PDGFC-208ENST00000512711 HOXA5P20719 270 aa4□□□□□ -1.77
PDGFC-208ENST00000512711 VAMP1P23763 118 aa4□□□□□ -1.77
PDGFC-208ENST00000512711 SOX9P48436 509 aa4□□□□□ -1.77
PDGFC-208ENST00000512711 GIPRP48546 466 aa4□□□□□ -1.77
PDGFC-208ENST00000512711 CTSWP56202 376 aa4□□□□□ -1.77
PDGFC-208ENST00000512711 RAB3GAP1Q15042 981 aa4□□□□□ -1.77
PDGFC-208ENST00000512711 GNPTABQ3T906 1256 aa4□□□□□ -1.77
PDGFC-208ENST00000512711 RPTNQ6XPR3 784 aa4□□□□□ -1.77
PDGFC-208ENST00000512711 LDHDQ86WU2 507 aa4□□□□□ -1.77
PDGFC-208ENST00000512711 MZB1Q8WU39 189 aa4□□□□□ -1.77
PDGFC-208ENST00000512711 DACT3Q96B18 629 aaPredicted RBP4□□□□□ -1.77
PDGFC-208ENST00000512711 MRRFQ96E11 262 aaKnown RBP4□□□□□ -1.77
PDGFC-208ENST00000512711 FGD4Q96M96 766 aa4□□□□□ -1.77
PDGFC-208ENST00000512711 ZDHHC15Q96MV8 337 aa4□□□□□ -1.77
PDGFC-208ENST00000512711 SRRTQ9BXP5 876 aaKnown RBP4□□□□□ -1.77
PDGFC-208ENST00000512711 BCL11AQ9H165 835 aa4□□□□□ -1.77
PDGFC-208ENST00000512711 TNFRSF12AQ9NP84 129 aa4□□□□□ -1.77
PDGFC-208ENST00000512711 PRR13Q9NZ81 148 aa4□□□□□ -1.77
PDGFC-208ENST00000512711 EPB41L3Q9Y2J2 1087 aaPredicted RBP4□□□□□ -1.77
PDGFC-208ENST00000512711 FHOD1Q9Y613 1164 aa4□□□□□ -1.77
PDGFC-208ENST00000512711 TRIM13O60858 407 aa3.99□□□□□ -1.77
PDGFC-208ENST00000512711 NASPP49321 788 aaPredicted RBP3.99□□□□□ -1.77
PDGFC-208ENST00000512711 EIF6P56537 245 aaKnown RBP3.99□□□□□ -1.77
PDGFC-208ENST00000512711 CBX2Q14781 532 aaPredicted RBP3.99□□□□□ -1.77
PDGFC-208ENST00000512711 CWF19L1Q69YN2 538 aaKnown RBP3.99□□□□□ -1.77
PDGFC-208ENST00000512711 TMC6Q7Z403 805 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms