RNA–Protein interactions for RNA: ENST00000512694.5

DDR1-268, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-268ENST00000512694 LRRC47Q8N1G4 583 aaKnown RBP19■□□□□ 0.63
DDR1-268ENST00000512694 ANKRD35Q8N283 1001 aa19■□□□□ 0.63
DDR1-268ENST00000512694 KLHDC9Q8NEP7 349 aa19■□□□□ 0.63
DDR1-268ENST00000512694 OTUD7AQ8TE49 926 aaPredicted RBP19■□□□□ 0.63
DDR1-268ENST00000512694 PPP1R12CQ9BZL4 782 aa19■□□□□ 0.63
DDR1-268ENST00000512694 EPB41L4AQ9HCS5 686 aaPredicted RBP19■□□□□ 0.63
DDR1-268ENST00000512694 LCTP09848 1927 aa19■□□□□ 0.63
DDR1-268ENST00000512694 TMEM265A0A087WTH1 108 aa18.99■□□□□ 0.63
DDR1-268ENST00000512694 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.99■□□□□ 0.63
DDR1-268ENST00000512694 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.99■□□□□ 0.63
DDR1-268ENST00000512694 GRXCR1A8MXD5 290 aa18.99■□□□□ 0.63
DDR1-268ENST00000512694 DUSP11O75319 330 aaKnown RBP18.99■□□□□ 0.63
DDR1-268ENST00000512694 TIMP1P01033 207 aa18.99■□□□□ 0.63
DDR1-268ENST00000512694 ASGR1P07306 291 aa18.99■□□□□ 0.63
DDR1-268ENST00000512694 CCDC144BQ3MJ40 725 aa18.99■□□□□ 0.63
DDR1-268ENST00000512694 CCSAPQ6IQ19 270 aaPredicted RBP18.99■□□□□ 0.63
DDR1-268ENST00000512694 TICAM2Q86XR7 235 aa18.99■□□□□ 0.63
DDR1-268ENST00000512694 MSL3Q8N5Y2 521 aaKnown RBP18.99■□□□□ 0.63
DDR1-268ENST00000512694 PPM1EQ8WY54 764 aa18.99■□□□□ 0.63
DDR1-268ENST00000512694 TIFAQ96CG3 184 aa18.99■□□□□ 0.63
DDR1-268ENST00000512694 EVI5LQ96CN4 794 aa18.99■□□□□ 0.63
DDR1-268ENST00000512694 FGD4Q96M96 766 aa18.99■□□□□ 0.63
DDR1-268ENST00000512694 GLT1D1Q96MS3 346 aa18.99■□□□□ 0.63
DDR1-268ENST00000512694 TOX2Q96NM4 488 aa18.99■□□□□ 0.63
DDR1-268ENST00000512694 TBX21Q9UL17 535 aa18.99■□□□□ 0.63
DDR1-268ENST00000512694 SALL3Q9BXA9 1300 aa18.99■□□□□ 0.63
DDR1-268ENST00000512694 M0R2C6 588 aa18.98■□□□□ 0.63
DDR1-268ENST00000512694 PBX2P40425 430 aa18.98■□□□□ 0.63
DDR1-268ENST00000512694 MAMDC4Q6UXC1 1216 aa18.98■□□□□ 0.63
DDR1-268ENST00000512694 CCDC129Q6ZRS4 1044 aa18.98■□□□□ 0.63
DDR1-268ENST00000512694 ARMCX2Q7L311 632 aa18.98■□□□□ 0.63
DDR1-268ENST00000512694 CEP95Q96GE4 821 aa18.98■□□□□ 0.63
DDR1-268ENST00000512694 NAPBQ9H115 298 aa18.98■□□□□ 0.63
DDR1-268ENST00000512694 ZNF576Q9H609 170 aa18.98■□□□□ 0.63
DDR1-268ENST00000512694 PRDM6Q9NQX0 595 aa18.98■□□□□ 0.63
DDR1-268ENST00000512694 PATL2C9JE40 543 aaKnown RBP18.97■□□□□ 0.63
DDR1-268ENST00000512694 ACRP10323 421 aa18.97■□□□□ 0.63
DDR1-268ENST00000512694 CSF2RAP15509 400 aa18.97■□□□□ 0.63
DDR1-268ENST00000512694 PDE1AP54750 535 aa18.97■□□□□ 0.63
DDR1-268ENST00000512694 BEX3Q00994 111 aa18.97■□□□□ 0.63
DDR1-268ENST00000512694 CNTN2Q02246 1040 aa18.97■□□□□ 0.63
DDR1-268ENST00000512694 PDE4BQ07343 736 aa18.97■□□□□ 0.63
DDR1-268ENST00000512694 PPIGQ13427 754 aaKnown RBP eCLIP18.97■□□□□ 0.632e-6■■■□□ 16.6
DDR1-268ENST00000512694 GNASQ5JWF2 1037 aa18.97■□□□□ 0.63
DDR1-268ENST00000512694 ZMYM1Q5SVZ6 1142 aa18.97■□□□□ 0.63
DDR1-268ENST00000512694 MFSD5Q6N075 450 aa18.97■□□□□ 0.63
DDR1-268ENST00000512694 SPC25Q9HBM1 224 aa18.97■□□□□ 0.63
DDR1-268ENST00000512694 SLC38A10Q9HBR0 1119 aa18.97■□□□□ 0.63
DDR1-268ENST00000512694 FEM1BQ9UK73 627 aa18.97■□□□□ 0.63
DDR1-268ENST00000512694 MROH7Q68CQ1 1323 aa18.97■□□□□ 0.63
DDR1-268ENST00000512694 IGKV6D-41A0A0C4DH26 115 aa18.96■□□□□ 0.63
DDR1-268ENST00000512694 A0A0U1RQG5 324 aaPredicted RBP18.96■□□□□ 0.63
DDR1-268ENST00000512694 ATP2A1O14983 1001 aa18.96■□□□□ 0.63
DDR1-268ENST00000512694 CST5P28325 142 aaPredicted RBP18.96■□□□□ 0.63
DDR1-268ENST00000512694 IKQ13123 557 aaPredicted RBP18.96■□□□□ 0.63
DDR1-268ENST00000512694 NOL8Q76FK4 1167 aaKnown RBP18.96■□□□□ 0.63
DDR1-268ENST00000512694 C16orf59Q7L2K0 433 aa18.96■□□□□ 0.63
DDR1-268ENST00000512694 ZNF467Q7Z7K2 595 aaPredicted RBP18.96■□□□□ 0.63
DDR1-268ENST00000512694 CCDC144CPQ8IYA2 1237 aa18.96■□□□□ 0.63
DDR1-268ENST00000512694 IFNL3Q8IZI9 196 aa18.96■□□□□ 0.63
DDR1-268ENST00000512694 ZNF444Q8N0Y2 327 aaPredicted RBP18.96■□□□□ 0.63
DDR1-268ENST00000512694 PCSK9Q8NBP7 692 aaKnown RBP18.96■□□□□ 0.63
DDR1-268ENST00000512694 UPF3AQ9H1J1 476 aaKnown RBP18.96■□□□□ 0.63
DDR1-268ENST00000512694 ABHD16BQ9H3Z7 469 aa18.96■□□□□ 0.63
DDR1-268ENST00000512694 CHD7Q9P2D1 2997 aa18.96■□□□□ 0.63
DDR1-268ENST00000512694 DDX49Q9Y6V7 483 aaKnown RBP18.96■□□□□ 0.63
DDR1-268ENST00000512694 REV3LO60673 3130 aa18.95■□□□□ 0.62
DDR1-268ENST00000512694 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.95■□□□□ 0.62
DDR1-268ENST00000512694 PTGS1P23219 599 aa18.95■□□□□ 0.62
DDR1-268ENST00000512694 CYP2C18P33260 490 aa18.95■□□□□ 0.62
DDR1-268ENST00000512694 TMEM240Q5SV17 173 aa18.95■□□□□ 0.62
DDR1-268ENST00000512694 PBX4Q9BYU1 374 aa18.95■□□□□ 0.62
DDR1-268ENST00000512694 PRDM12Q9H4Q4 367 aa18.95■□□□□ 0.62
DDR1-268ENST00000512694 MTMR4Q9NYA4 1195 aa18.95■□□□□ 0.62
DDR1-268ENST00000512694 FBXO40Q9UH90 709 aa18.95■□□□□ 0.62
DDR1-268ENST00000512694 ELP1O95163 1332 aa18.95■□□□□ 0.62
DDR1-268ENST00000512694 TMEM232C9JQI7 657 aa18.94■□□□□ 0.62
DDR1-268ENST00000512694 ARVCFO00192 962 aa18.94■□□□□ 0.62
DDR1-268ENST00000512694 TTLL1O95922 423 aa18.94■□□□□ 0.62
DDR1-268ENST00000512694 CDK7P50613 346 aa18.94■□□□□ 0.62
DDR1-268ENST00000512694 GJA9P57773 515 aa18.94■□□□□ 0.62
DDR1-268ENST00000512694 PPP4R3BQ5MIZ7 849 aa18.94■□□□□ 0.62
DDR1-268ENST00000512694 SLFN13Q68D06 897 aa18.94■□□□□ 0.62
DDR1-268ENST00000512694 ZNF365Q70YC5 407 aa18.94■□□□□ 0.62
DDR1-268ENST00000512694 FAM126BQ8IXS8 530 aa18.94■□□□□ 0.62
DDR1-268ENST00000512694 SMC5Q8IY18 1101 aa18.94■□□□□ 0.62
DDR1-268ENST00000512694 TMEM199Q8N511 208 aa18.94■□□□□ 0.62
DDR1-268ENST00000512694 CHST13Q8NET6 341 aa18.94■□□□□ 0.62
DDR1-268ENST00000512694 LNPKQ9C0E8 428 aa18.94■□□□□ 0.62
DDR1-268ENST00000512694 SCN5AQ14524 2016 aa18.94■□□□□ 0.62
DDR1-268ENST00000512694 TCF20Q9UGU0 1960 aaKnown RBP18.93■□□□□ 0.62
DDR1-268ENST00000512694 TLR3O15455 904 aaKnown RBP18.93■□□□□ 0.62
DDR1-268ENST00000512694 BMP3P12645 472 aa18.93■□□□□ 0.62
DDR1-268ENST00000512694 SNAP25P60880 206 aa18.93■□□□□ 0.62
DDR1-268ENST00000512694 SYMPKQ92797 1274 aaKnown RBP18.93■□□□□ 0.62
DDR1-268ENST00000512694 AGBL1Q96MI9 1066 aa18.93■□□□□ 0.62
DDR1-268ENST00000512694 GAS2L1Q99501 681 aaPredicted RBP18.93■□□□□ 0.62
DDR1-268ENST00000512694 ACAD9Q9H845 621 aa18.93■□□□□ 0.62
DDR1-268ENST00000512694 RNF146Q9NTX7 359 aa18.93■□□□□ 0.62
DDR1-268ENST00000512694 SYNPO2Q9UMS6 1093 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms