RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 IRX3P78415 501 aaPredicted RBP8.74□□□□□ -1.01
USP46-208ENST00000512656 MAP3K12Q12852 859 aa8.74□□□□□ -1.01
USP46-208ENST00000512656 HSP90AB4PQ58FF6 505 aa8.74□□□□□ -1.01
USP46-208ENST00000512656 RNF20Q5VTR2 975 aa8.74□□□□□ -1.01
USP46-208ENST00000512656 METTL16Q86W50 562 aaKnown RBP8.74□□□□□ -1.01
USP46-208ENST00000512656 MAPKAPK5Q8IW41 473 aa8.74□□□□□ -1.01
USP46-208ENST00000512656 CCDC155Q8N6L0 562 aa8.74□□□□□ -1.01
USP46-208ENST00000512656 INSM2Q96T92 566 aaPredicted RBP8.74□□□□□ -1.01
USP46-208ENST00000512656 ASCC2Q9H1I8 757 aaPredicted RBP8.74□□□□□ -1.01
USP46-208ENST00000512656 C1orf115Q9H7X2 142 aa8.74□□□□□ -1.01
USP46-208ENST00000512656 ZSWIM8A7E2V4 1837 aa8.74□□□□□ -1.01
USP46-208ENST00000512656 FLT1P17948 1338 aa8.74□□□□□ -1.01
USP46-208ENST00000512656 USP17L10C9JJH3 530 aa8.73□□□□□ -1.01
USP46-208ENST00000512656 IDH1O75874 414 aaKnown RBP8.73□□□□□ -1.01
USP46-208ENST00000512656 HOXA7P31268 230 aaPredicted RBP8.73□□□□□ -1.01
USP46-208ENST00000512656 ADD1P35611 737 aaKnown RBP8.73□□□□□ -1.01
USP46-208ENST00000512656 USP5P45974 858 aa8.73□□□□□ -1.01
USP46-208ENST00000512656 RRP1BQ14684 758 aaKnown RBP8.73□□□□□ -1.01
USP46-208ENST00000512656 UBE2Q1Q7Z7E8 422 aa8.73□□□□□ -1.01
USP46-208ENST00000512656 CCAR1Q8IX12 1150 aaKnown RBP8.73□□□□□ -1.01
USP46-208ENST00000512656 RNF217Q8TC41 542 aa8.73□□□□□ -1.01
USP46-208ENST00000512656 GTF3C2Q8WUA4 911 aaPredicted RBP8.73□□□□□ -1.01
USP46-208ENST00000512656 CCDC8Q9H0W5 538 aaPredicted RBP8.73□□□□□ -1.01
USP46-208ENST00000512656 POLMQ9NP87 494 aaPredicted RBP8.73□□□□□ -1.01
USP46-208ENST00000512656 PIH1D3Q9NQM4 214 aaKnown RBP8.73□□□□□ -1.01
USP46-208ENST00000512656 MORF4L1Q9UBU8 362 aa8.73□□□□□ -1.01
USP46-208ENST00000512656 DBNLQ9UJU6 430 aaKnown RBP8.73□□□□□ -1.01
USP46-208ENST00000512656 PALD1Q9ULE6 856 aa8.73□□□□□ -1.01
USP46-208ENST00000512656 HMGCRP04035 888 aa8.72□□□□□ -1.01
USP46-208ENST00000512656 RAB15P59190 212 aa8.72□□□□□ -1.01
USP46-208ENST00000512656 NR1H3Q13133 447 aa8.72□□□□□ -1.01
USP46-208ENST00000512656 TTF1Q15361 905 aaPredicted RBP8.72□□□□□ -1.01
USP46-208ENST00000512656 CEP85Q6P2H3 762 aa8.72□□□□□ -1.01
USP46-208ENST00000512656 USP17L2Q6R6M4 530 aa8.72□□□□□ -1.01
USP46-208ENST00000512656 ADGRA1Q86SQ6 560 aa8.72□□□□□ -1.01
USP46-208ENST00000512656 TTC6Q86TZ1 520 aa8.72□□□□□ -1.01
USP46-208ENST00000512656 KDF1Q8NAX2 398 aaPredicted RBP8.72□□□□□ -1.01
USP46-208ENST00000512656 GPRC5AQ8NFJ5 357 aa8.72□□□□□ -1.01
USP46-208ENST00000512656 EAF2Q96CJ1 260 aaPredicted RBP8.72□□□□□ -1.01
USP46-208ENST00000512656 DEFB118Q96PH6 123 aa8.72□□□□□ -1.01
USP46-208ENST00000512656 PAK6Q9NQU5 681 aaPredicted RBP8.72□□□□□ -1.01
USP46-208ENST00000512656 SAP30BPQ9UHR5 308 aaKnown RBP8.72□□□□□ -1.01
USP46-208ENST00000512656 ZBTB21Q9ULJ3 1066 aa8.72□□□□□ -1.01
USP46-208ENST00000512656 PCDHB9Q9Y5E1 797 aa8.72□□□□□ -1.01
USP46-208ENST00000512656 PHIPQ8WWQ0 1821 aa8.71□□□□□ -1.01
USP46-208ENST00000512656 HMMRO75330 724 aa8.71□□□□□ -1.02
USP46-208ENST00000512656 GDF11O95390 407 aa8.71□□□□□ -1.02
USP46-208ENST00000512656 RLBP1P12271 317 aa8.71□□□□□ -1.02
USP46-208ENST00000512656 MAPK4P31152 587 aa8.71□□□□□ -1.02
USP46-208ENST00000512656 FXR1P51114 621 aaKnown RBP eCLIP8.71□□□□□ -1.02
USP46-208ENST00000512656 USP14P54578 494 aa8.71□□□□□ -1.02
USP46-208ENST00000512656 HERVK_113P62684 666 aa8.71□□□□□ -1.02
USP46-208ENST00000512656 DYNLL1P63167 89 aaKnown RBP8.71□□□□□ -1.02
USP46-208ENST00000512656 PDE3AQ14432 1141 aa8.71□□□□□ -1.02
USP46-208ENST00000512656 AACSQ86V21 672 aa8.71□□□□□ -1.02
USP46-208ENST00000512656 MAGEB6Q8N7X4 407 aa8.71□□□□□ -1.02
USP46-208ENST00000512656 MIGA1Q8NAN2 632 aa8.71□□□□□ -1.02
USP46-208ENST00000512656 SOCS4Q8WXH5 440 aa8.71□□□□□ -1.02
USP46-208ENST00000512656 P2RX7Q99572 595 aaKnown RBP8.71□□□□□ -1.02
USP46-208ENST00000512656 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.71□□□□□ -1.02
USP46-208ENST00000512656 EHD4Q9H223 541 aa8.71□□□□□ -1.02
USP46-208ENST00000512656 CHMP4BQ9H444 224 aaKnown RBP8.71□□□□□ -1.02
USP46-208ENST00000512656 ZNF395Q9H8N7 513 aaPredicted RBP8.71□□□□□ -1.02
USP46-208ENST00000512656 CWC22Q9HCG8 908 aaKnown RBP8.71□□□□□ -1.02
USP46-208ENST00000512656 CABP5Q9NP86 173 aa8.71□□□□□ -1.02
USP46-208ENST00000512656 TLR7Q9NYK1 1049 aaKnown RBP8.71□□□□□ -1.02
USP46-208ENST00000512656 SERPINB13Q9UIV8 391 aa8.71□□□□□ -1.02
USP46-208ENST00000512656 NDUFB9Q9Y6M9 179 aa8.71□□□□□ -1.02
USP46-208ENST00000512656 PTPRFP10586 1907 aa8.71□□□□□ -1.02
USP46-208ENST00000512656 ZBED9Q6R2W3 1325 aa8.71□□□□□ -1.02
USP46-208ENST00000512656 MAST2Q6P0Q8 1798 aa8.71□□□□□ -1.02
USP46-208ENST00000512656 MGAMO43451 1857 aa8.7□□□□□ -1.02
USP46-208ENST00000512656 GLRX3O76003 335 aaKnown RBP8.7□□□□□ -1.02
USP46-208ENST00000512656 GH2P01242 217 aa8.7□□□□□ -1.02
USP46-208ENST00000512656 XRCC5P13010 732 aaKnown RBP8.7□□□□□ -1.02
USP46-208ENST00000512656 RNF144AP50876 292 aaPredicted RBP8.7□□□□□ -1.02
USP46-208ENST00000512656 CCNA1P78396 465 aa8.7□□□□□ -1.02
USP46-208ENST00000512656 CERKLQ49MI3 558 aaPredicted RBP8.7□□□□□ -1.02
USP46-208ENST00000512656 DIEXFQ68CQ4 756 aaKnown RBP8.7□□□□□ -1.02
USP46-208ENST00000512656 NECAB2Q7Z6G3 386 aa8.7□□□□□ -1.02
USP46-208ENST00000512656 CLASRPQ8N2M8 674 aaKnown RBP8.7□□□□□ -1.02
USP46-208ENST00000512656 FEZ1Q99689 392 aa8.7□□□□□ -1.02
USP46-208ENST00000512656 CRNKL1Q9BZJ0 848 aaKnown RBP8.7□□□□□ -1.02
USP46-208ENST00000512656 DNAJC18Q9H819 358 aa8.7□□□□□ -1.02
USP46-208ENST00000512656 GJD2Q9UKL4 321 aa8.7□□□□□ -1.02
USP46-208ENST00000512656 EXOC6BQ9Y2D4 811 aa8.7□□□□□ -1.02
USP46-208ENST00000512656 RPTORQ8N122 1335 aa8.7□□□□□ -1.02
USP46-208ENST00000512656 LOC285556D6RIA3 1793 aa8.7□□□□□ -1.02
USP46-208ENST00000512656 USP17L15C9J2P7 530 aa8.69□□□□□ -1.02
USP46-208ENST00000512656 USP17L13C9JLJ4 530 aa8.69□□□□□ -1.02
USP46-208ENST00000512656 USP17L11C9JVI0 530 aa8.69□□□□□ -1.02
USP46-208ENST00000512656 USP17L18D6R9N7 530 aa8.69□□□□□ -1.02
USP46-208ENST00000512656 USP17L22D6RA61 530 aa8.69□□□□□ -1.02
USP46-208ENST00000512656 USP17L17D6RBQ6 530 aa8.69□□□□□ -1.02
USP46-208ENST00000512656 USP17L19D6RCP7 530 aa8.69□□□□□ -1.02
USP46-208ENST00000512656 USP17L20D6RJB6 530 aa8.69□□□□□ -1.02
USP46-208ENST00000512656 IFIT2P09913 472 aaKnown RBP8.69□□□□□ -1.02
USP46-208ENST00000512656 GPC1P35052 558 aa8.69□□□□□ -1.02
USP46-208ENST00000512656 RGS2P41220 211 aa8.69□□□□□ -1.02
USP46-208ENST00000512656 ERVK-9P63128 1117 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms