RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 SEC63Q9UGP8 760 aaKnown RBP8.69□□□□□ -1.02
NR1I3-231ENST00000512340 CCPG1Q9ULG6 757 aa8.69□□□□□ -1.02
NR1I3-231ENST00000512340 PRR12Q9ULL5 1215 aa8.69□□□□□ -1.02
NR1I3-231ENST00000512340 NAP1L2Q9ULW6 460 aaPredicted RBP8.69□□□□□ -1.02
NR1I3-231ENST00000512340 PFASO15067 1338 aa8.69□□□□□ -1.02
NR1I3-231ENST00000512340 FRMPD2Q68DX3 1309 aaPredicted RBP8.69□□□□□ -1.02
NR1I3-231ENST00000512340 KLRF2D3W0D1 207 aa8.68□□□□□ -1.02
NR1I3-231ENST00000512340 HMGCRP04035 888 aa8.68□□□□□ -1.02
NR1I3-231ENST00000512340 ICAM1P05362 532 aa8.68□□□□□ -1.02
NR1I3-231ENST00000512340 SNHG28P0DPA3 235 aa8.68□□□□□ -1.02
NR1I3-231ENST00000512340 SMARCA1P28370 1054 aa8.68□□□□□ -1.02
NR1I3-231ENST00000512340 RCAN1P53805 252 aa8.68□□□□□ -1.02
NR1I3-231ENST00000512340 ANKRD1Q15327 319 aa8.68□□□□□ -1.02
NR1I3-231ENST00000512340 SEC23AQ15436 765 aa8.68□□□□□ -1.02
NR1I3-231ENST00000512340 Q3C1V9 767 aa8.68□□□□□ -1.02
NR1I3-231ENST00000512340 CCDC174Q6PII3 467 aa8.68□□□□□ -1.02
NR1I3-231ENST00000512340 CPLX2Q6PUV4 134 aaKnown RBP8.68□□□□□ -1.02
NR1I3-231ENST00000512340 CYB5R4Q7L1T6 521 aa8.68□□□□□ -1.02
NR1I3-231ENST00000512340 MCF2L2Q86YR7 1114 aa8.68□□□□□ -1.02
NR1I3-231ENST00000512340 ZNF654Q8IZM8 581 aa8.68□□□□□ -1.02
NR1I3-231ENST00000512340 IGDCC4Q8TDY8 1250 aa8.68□□□□□ -1.02
NR1I3-231ENST00000512340 KCNB2Q92953 911 aa8.68□□□□□ -1.02
NR1I3-231ENST00000512340 USP26Q9BXU7 913 aa8.68□□□□□ -1.02
NR1I3-231ENST00000512340 TM6SF1Q9BZW5 370 aa8.68□□□□□ -1.02
NR1I3-231ENST00000512340 RAVER2Q9HCJ3 691 aaKnown RBP8.68□□□□□ -1.02
NR1I3-231ENST00000512340 RBM28Q9NW13 759 aaKnown RBP8.68□□□□□ -1.02
NR1I3-231ENST00000512340 DIS3Q9Y2L1 958 aaKnown RBP8.68□□□□□ -1.02
NR1I3-231ENST00000512340 TACC3Q9Y6A5 838 aa8.68□□□□□ -1.02
NR1I3-231ENST00000512340 PTCH2Q9Y6C5 1203 aa8.68□□□□□ -1.02
NR1I3-231ENST00000512340 SH2B2O14492 632 aaPredicted RBP8.67□□□□□ -1.02
NR1I3-231ENST00000512340 ZBTB43O43298 467 aa8.67□□□□□ -1.02
NR1I3-231ENST00000512340 CNMDO75829 334 aa8.67□□□□□ -1.02
NR1I3-231ENST00000512340 ABCB11O95342 1321 aa8.67□□□□□ -1.02
NR1I3-231ENST00000512340 ALAS1P13196 640 aa8.67□□□□□ -1.02
NR1I3-231ENST00000512340 CASTP20810 708 aaKnown RBP8.67□□□□□ -1.02
NR1I3-231ENST00000512340 CYP2B6P20813 491 aa8.67□□□□□ -1.02
NR1I3-231ENST00000512340 ADORA2AP29274 412 aa8.67□□□□□ -1.02
NR1I3-231ENST00000512340 AKAP17AQ02040 695 aaKnown RBP8.67□□□□□ -1.02
NR1I3-231ENST00000512340 GRB14Q14449 540 aa8.67□□□□□ -1.02
NR1I3-231ENST00000512340 GRM4Q14833 912 aa8.67□□□□□ -1.02
NR1I3-231ENST00000512340 STOX1Q6ZVD7 989 aa8.67□□□□□ -1.02
NR1I3-231ENST00000512340 CHST3Q7LGC8 479 aa8.67□□□□□ -1.02
NR1I3-231ENST00000512340 RBBP6Q7Z6E9 1792 aaKnown RBP8.67□□□□□ -1.02
NR1I3-231ENST00000512340 SGMS1Q86VZ5 419 aa8.67□□□□□ -1.02
NR1I3-231ENST00000512340 FBXO11Q86XK2 927 aa8.67□□□□□ -1.02
NR1I3-231ENST00000512340 MSL3Q8N5Y2 521 aaKnown RBP8.67□□□□□ -1.02
NR1I3-231ENST00000512340 SAMD3Q8N6K7 520 aa8.67□□□□□ -1.02
NR1I3-231ENST00000512340 ARMC5Q96C12 935 aa8.67□□□□□ -1.02
NR1I3-231ENST00000512340 RRP36Q96EU6 259 aaKnown RBP8.67□□□□□ -1.02
NR1I3-231ENST00000512340 TRERF1Q96PN7 1200 aa8.67□□□□□ -1.02
NR1I3-231ENST00000512340 AMNQ9BXJ7 453 aa8.67□□□□□ -1.02
NR1I3-231ENST00000512340 PORCNQ9H237 461 aa8.67□□□□□ -1.02
NR1I3-231ENST00000512340 RANBP17Q9H2T7 1088 aaKnown RBP8.67□□□□□ -1.02
NR1I3-231ENST00000512340 LY9Q9HBG7 655 aa8.67□□□□□ -1.02
NR1I3-231ENST00000512340 RNF146Q9NTX7 359 aa8.67□□□□□ -1.02
NR1I3-231ENST00000512340 RBM27Q9P2N5 1060 aaKnown RBP8.67□□□□□ -1.02
NR1I3-231ENST00000512340 ADD3Q9UEY8 706 aaKnown RBP8.67□□□□□ -1.02
NR1I3-231ENST00000512340 ZNF214Q9UL59 606 aaPredicted RBP8.67□□□□□ -1.02
NR1I3-231ENST00000512340 MRPL11Q9Y3B7 192 aaKnown RBP8.67□□□□□ -1.02
NR1I3-231ENST00000512340 SNX14Q9Y5W7 946 aa8.67□□□□□ -1.02
NR1I3-231ENST00000512340 KIAA0100Q14667 2235 aaKnown RBP8.66□□□□□ -1.02
NR1I3-231ENST00000512340 ASB14A6NK59 587 aa8.66□□□□□ -1.02
NR1I3-231ENST00000512340 POTEB2H3BUK9 544 aa8.66□□□□□ -1.02
NR1I3-231ENST00000512340 MSCO60682 206 aa8.66□□□□□ -1.02
NR1I3-231ENST00000512340 HOXC6P09630 235 aa8.66□□□□□ -1.02
NR1I3-231ENST00000512340 GOLGA8HP0CJ92 632 aa8.66□□□□□ -1.02
NR1I3-231ENST00000512340 SLC16A2P36021 539 aa8.66□□□□□ -1.02
NR1I3-231ENST00000512340 CDC37Q16543 378 aaPredicted RBP8.66□□□□□ -1.02
NR1I3-231ENST00000512340 GLIPR1L2Q4G1C9 344 aa8.66□□□□□ -1.02
NR1I3-231ENST00000512340 MORN1Q5T089 497 aa8.66□□□□□ -1.02
NR1I3-231ENST00000512340 RUFY3Q7L099 469 aa8.66□□□□□ -1.02
NR1I3-231ENST00000512340 ADGRF4Q8IZF3 695 aa8.66□□□□□ -1.02
NR1I3-231ENST00000512340 FANCBQ8NB91 859 aa8.66□□□□□ -1.02
NR1I3-231ENST00000512340 RNF208Q9H0X6 261 aa8.66□□□□□ -1.02
NR1I3-231ENST00000512340 VAT1LQ9HCJ6 419 aa8.66□□□□□ -1.02
NR1I3-231ENST00000512340 HMX1Q9NP08 348 aaPredicted RBP8.66□□□□□ -1.02
NR1I3-231ENST00000512340 HOMER2Q9NSB8 354 aa8.66□□□□□ -1.02
NR1I3-231ENST00000512340 NRBP1Q9UHY1 535 aa8.66□□□□□ -1.02
NR1I3-231ENST00000512340 GJD2Q9UKL4 321 aa8.66□□□□□ -1.02
NR1I3-231ENST00000512340 GABRQQ9UN88 632 aa8.66□□□□□ -1.02
NR1I3-231ENST00000512340 CNPY2Q9Y2B0 182 aa8.66□□□□□ -1.02
NR1I3-231ENST00000512340 MKI67P46013 3256 aaKnown RBP8.66□□□□□ -1.02
NR1I3-231ENST00000512340 MGAMO43451 1857 aa8.66□□□□□ -1.02
NR1I3-231ENST00000512340 RPTORQ8N122 1335 aa8.65□□□□□ -1.02
NR1I3-231ENST00000512340 LOC102724159A0A0B4J2E5 919 aa8.65□□□□□ -1.02
NR1I3-231ENST00000512340 PNMA6FA0A0J9YX94 578 aa8.65□□□□□ -1.02
NR1I3-231ENST00000512340 KLF18A0A0U1RQI7 1052 aa8.65□□□□□ -1.02
NR1I3-231ENST00000512340 PALM3A6NDB9 673 aaPredicted RBP8.65□□□□□ -1.02
NR1I3-231ENST00000512340 CPLX1O14810 134 aa8.65□□□□□ -1.02
NR1I3-231ENST00000512340 ZBTB5O15062 677 aa8.65□□□□□ -1.02
NR1I3-231ENST00000512340 INHAP05111 366 aa8.65□□□□□ -1.02
NR1I3-231ENST00000512340 RPS6KB1P23443 525 aa8.65□□□□□ -1.02
NR1I3-231ENST00000512340 ANTXR2P58335 489 aa8.65□□□□□ -1.02
NR1I3-231ENST00000512340 EXOSC10Q01780 885 aaKnown RBP8.65□□□□□ -1.02
NR1I3-231ENST00000512340 TROAPQ12815 778 aa8.65□□□□□ -1.02
NR1I3-231ENST00000512340 PWP2Q15269 919 aaKnown RBP8.65□□□□□ -1.02
NR1I3-231ENST00000512340 RTN1Q16799 776 aa8.65□□□□□ -1.02
NR1I3-231ENST00000512340 OLFML2BQ68BL8 750 aa8.65□□□□□ -1.02
NR1I3-231ENST00000512340 TTBK2Q6IQ55 1244 aa8.65□□□□□ -1.02
NR1I3-231ENST00000512340 NSMFQ6X4W1 530 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms