RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 PPP1R9AQ9ULJ8 1098 aa11.49□□□□□ -0.57
PDGFRA-209ENST00000512143 PCDHA4Q9UN74 947 aa11.49□□□□□ -0.57
PDGFRA-209ENST00000512143 MYH15Q9Y2K3 1946 aa11.48□□□□□ -0.57
PDGFRA-209ENST00000512143 HOXA7P31268 230 aaPredicted RBP11.48□□□□□ -0.57
PDGFRA-209ENST00000512143 KRT2P35908 639 aa11.48□□□□□ -0.57
PDGFRA-209ENST00000512143 NLRP5P59047 1200 aa11.48□□□□□ -0.57
PDGFRA-209ENST00000512143 SNAP25P60880 206 aa11.48□□□□□ -0.57
PDGFRA-209ENST00000512143 NR5A1Q13285 461 aa11.48□□□□□ -0.57
PDGFRA-209ENST00000512143 NFKBIBQ15653 356 aa11.48□□□□□ -0.57
PDGFRA-209ENST00000512143 EARS2Q5JPH6 523 aaKnown RBP11.48□□□□□ -0.57
PDGFRA-209ENST00000512143 ATL3Q6DD88 541 aa11.48□□□□□ -0.57
PDGFRA-209ENST00000512143 MCTP1Q6DN14 999 aa11.48□□□□□ -0.57
PDGFRA-209ENST00000512143 C2orf69Q8N8R5 385 aa11.48□□□□□ -0.57
PDGFRA-209ENST00000512143 TMEM87AQ8NBN3 555 aa11.48□□□□□ -0.57
PDGFRA-209ENST00000512143 PROCA1Q8NCQ7 364 aaPredicted RBP11.48□□□□□ -0.57
PDGFRA-209ENST00000512143 CCDC148Q8NFR7 591 aa11.48□□□□□ -0.57
PDGFRA-209ENST00000512143 CCDC12Q8WUD4 166 aaPredicted RBP11.48□□□□□ -0.57
PDGFRA-209ENST00000512143 OPTNQ96CV9 577 aa11.48□□□□□ -0.57
PDGFRA-209ENST00000512143 SLC10A4Q96EP9 437 aa11.48□□□□□ -0.57
PDGFRA-209ENST00000512143 GBP4Q96PP9 640 aa11.48□□□□□ -0.57
PDGFRA-209ENST00000512143 AMNQ9BXJ7 453 aa11.48□□□□□ -0.57
PDGFRA-209ENST00000512143 SLC38A10Q9HBR0 1119 aa11.48□□□□□ -0.57
PDGFRA-209ENST00000512143 TMOD4Q9NZQ9 345 aa11.48□□□□□ -0.57
PDGFRA-209ENST00000512143 ISY1Q9ULR0 285 aaKnown RBP11.48□□□□□ -0.57
PDGFRA-209ENST00000512143 ZNF536O15090 1300 aa11.48□□□□□ -0.57
PDGFRA-209ENST00000512143 MYPNQ86TC9 1320 aa11.48□□□□□ -0.57
PDGFRA-209ENST00000512143 SMCO2A6NFE2 343 aa11.47□□□□□ -0.57
PDGFRA-209ENST00000512143 USP17L15C9J2P7 530 aa11.47□□□□□ -0.57
PDGFRA-209ENST00000512143 USP17L13C9JLJ4 530 aa11.47□□□□□ -0.57
PDGFRA-209ENST00000512143 USP17L11C9JVI0 530 aa11.47□□□□□ -0.57
PDGFRA-209ENST00000512143 USP17L18D6R9N7 530 aa11.47□□□□□ -0.57
PDGFRA-209ENST00000512143 USP17L22D6RA61 530 aa11.47□□□□□ -0.57
PDGFRA-209ENST00000512143 USP17L17D6RBQ6 530 aa11.47□□□□□ -0.57
PDGFRA-209ENST00000512143 USP17L19D6RCP7 530 aa11.47□□□□□ -0.57
PDGFRA-209ENST00000512143 USP17L20D6RJB6 530 aa11.47□□□□□ -0.57
PDGFRA-209ENST00000512143 FDX1P10109 184 aa11.47□□□□□ -0.57
PDGFRA-209ENST00000512143 DSG3P32926 999 aa11.47□□□□□ -0.57
PDGFRA-209ENST00000512143 TOB1P50616 345 aaPredicted RBP11.47□□□□□ -0.57
PDGFRA-209ENST00000512143 NAPAP54920 295 aa11.47□□□□□ -0.57
PDGFRA-209ENST00000512143 USP17L24Q0WX57 530 aa11.47□□□□□ -0.57
PDGFRA-209ENST00000512143 IKQ13123 557 aaPredicted RBP11.47□□□□□ -0.57
PDGFRA-209ENST00000512143 MYSM1Q5VVJ2 828 aa11.47□□□□□ -0.57
PDGFRA-209ENST00000512143 FBXO11Q86XK2 927 aa11.47□□□□□ -0.57
PDGFRA-209ENST00000512143 TEX2Q8IWB9 1127 aa11.47□□□□□ -0.57
PDGFRA-209ENST00000512143 BLIDQ8IZY5 108 aa11.47□□□□□ -0.57
PDGFRA-209ENST00000512143 REPS2Q8NFH8 660 aa11.47□□□□□ -0.57
PDGFRA-209ENST00000512143 KIFC2Q96AC6 838 aa11.47□□□□□ -0.57
PDGFRA-209ENST00000512143 WNK4Q96J92 1243 aa11.47□□□□□ -0.57
PDGFRA-209ENST00000512143 MS4A4AQ96JQ5 239 aa11.47□□□□□ -0.57
PDGFRA-209ENST00000512143 PCDHA6Q9UN73 950 aa11.47□□□□□ -0.57
PDGFRA-209ENST00000512143 PCDHA8Q9Y5H6 950 aa11.47□□□□□ -0.57
PDGFRA-209ENST00000512143 PCDHA1Q9Y5I3 950 aa11.47□□□□□ -0.57
PDGFRA-209ENST00000512143 VWA5AO00534 786 aa11.46□□□□□ -0.57
PDGFRA-209ENST00000512143 OPLAHO14841 1288 aa11.46□□□□□ -0.57
PDGFRA-209ENST00000512143 FLOT1O75955 427 aa11.46□□□□□ -0.57
PDGFRA-209ENST00000512143 ICAM1P05362 532 aa11.46□□□□□ -0.57
PDGFRA-209ENST00000512143 GNA11P29992 359 aa11.46□□□□□ -0.57
PDGFRA-209ENST00000512143 CLK2P49760 499 aaKnown RBP11.46□□□□□ -0.57
PDGFRA-209ENST00000512143 KRT85P78386 507 aa11.46□□□□□ -0.57
PDGFRA-209ENST00000512143 TRAF1Q13077 416 aa11.46□□□□□ -0.57
PDGFRA-209ENST00000512143 COG2Q14746 738 aa11.46□□□□□ -0.57
PDGFRA-209ENST00000512143 FOXD4L6Q3SYB3 417 aaPredicted RBP11.46□□□□□ -0.57
PDGFRA-209ENST00000512143 NOM1Q5C9Z4 860 aaKnown RBP11.46□□□□□ -0.57
PDGFRA-209ENST00000512143 TREML2Q5T2D2 321 aa11.46□□□□□ -0.57
PDGFRA-209ENST00000512143 GPAT2Q6NUI2 795 aa11.46□□□□□ -0.57
PDGFRA-209ENST00000512143 POTEEQ6S8J3 1075 aa11.46□□□□□ -0.57
PDGFRA-209ENST00000512143 FOXD4L3Q6VB84 417 aaPredicted RBP11.46□□□□□ -0.57
PDGFRA-209ENST00000512143 USP28Q96RU2 1077 aa11.46□□□□□ -0.57
PDGFRA-209ENST00000512143 TANGO6Q9C0B7 1094 aa11.46□□□□□ -0.57
PDGFRA-209ENST00000512143 BRMS1Q9HCU9 246 aa11.46□□□□□ -0.57
PDGFRA-209ENST00000512143 C6orf50Q9HD87 102 aa11.46□□□□□ -0.57
PDGFRA-209ENST00000512143 RIC8AQ9NPQ8 531 aa11.46□□□□□ -0.57
PDGFRA-209ENST00000512143 RTEL1Q9NZ71 1219 aa11.46□□□□□ -0.57
PDGFRA-209ENST00000512143 RCOR1Q9UKL0 485 aa11.46□□□□□ -0.57
PDGFRA-209ENST00000512143 CNPY2Q9Y2B0 182 aa11.46□□□□□ -0.57
PDGFRA-209ENST00000512143 FAM205CA6NFA0 338 aa11.45□□□□□ -0.58
PDGFRA-209ENST00000512143 SPDYE16A6NNV3 312 aaPredicted RBP11.45□□□□□ -0.58
PDGFRA-209ENST00000512143 MEIS2O14770 477 aa11.45□□□□□ -0.58
PDGFRA-209ENST00000512143 ATP2A1O14983 1001 aa11.45□□□□□ -0.58
PDGFRA-209ENST00000512143 TOMM70O94826 608 aa11.45□□□□□ -0.58
PDGFRA-209ENST00000512143 SNAPC2Q13487 334 aa11.45□□□□□ -0.58
PDGFRA-209ENST00000512143 SPRYD7Q5W111 196 aa11.45□□□□□ -0.58
PDGFRA-209ENST00000512143 LBX2Q6XYB7 198 aa11.45□□□□□ -0.58
PDGFRA-209ENST00000512143 FASTKD5Q7L8L6 764 aaKnown RBP11.45□□□□□ -0.58
PDGFRA-209ENST00000512143 SAPCD2Q86UD0 394 aa11.45□□□□□ -0.58
PDGFRA-209ENST00000512143 SMC1BQ8NDV3 1235 aa11.45□□□□□ -0.58
PDGFRA-209ENST00000512143 ATG4CQ96DT6 458 aa11.45□□□□□ -0.58
PDGFRA-209ENST00000512143 ZNF396Q96N95 335 aaPredicted RBP11.45□□□□□ -0.58
PDGFRA-209ENST00000512143 GLT8D2Q9H1C3 349 aa11.45□□□□□ -0.58
PDGFRA-209ENST00000512143 PSTPIP2Q9H939 334 aa11.45□□□□□ -0.58
PDGFRA-209ENST00000512143 LMBRD1Q9NUN5 540 aa11.45□□□□□ -0.58
PDGFRA-209ENST00000512143 POLR3EQ9NVU0 708 aa11.45□□□□□ -0.58
PDGFRA-209ENST00000512143 HOXC10Q9NYD6 342 aa11.45□□□□□ -0.58
PDGFRA-209ENST00000512143 TFIP11Q9UBB9 837 aaKnown RBP11.45□□□□□ -0.58
PDGFRA-209ENST00000512143 CFAP45Q9UL16 551 aa11.45□□□□□ -0.58
PDGFRA-209ENST00000512143 AGTPBP1Q9UPW5 1226 aa11.45□□□□□ -0.58
PDGFRA-209ENST00000512143 ELP1O95163 1332 aa11.44□□□□□ -0.58
PDGFRA-209ENST00000512143 ABCB11O95342 1321 aa11.44□□□□□ -0.58
PDGFRA-209ENST00000512143 PIK3CDO00329 1044 aa11.44□□□□□ -0.58
PDGFRA-209ENST00000512143 EDIL3O43854 480 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms