RNA–Protein interactions for RNA: ENST00000512053.1

HMGCR-211, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 465 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-211ENST00000512053 GLT1D1Q96MS3 346 aa8.68□□□□□ -1.02
HMGCR-211ENST00000512053 ZHX1Q9UKY1 873 aaPredicted RBP8.68□□□□□ -1.02
HMGCR-211ENST00000512053 USP17L12C9JPN9 530 aa8.67□□□□□ -1.02
HMGCR-211ENST00000512053 USP17L21D6R901 530 aa8.67□□□□□ -1.02
HMGCR-211ENST00000512053 TNFRSF10AO00220 468 aa8.67□□□□□ -1.02
HMGCR-211ENST00000512053 ZBED4O75132 1171 aa8.67□□□□□ -1.02
HMGCR-211ENST00000512053 ELP1O95163 1332 aa8.67□□□□□ -1.02
HMGCR-211ENST00000512053 MBD4O95243 580 aa8.67□□□□□ -1.02
HMGCR-211ENST00000512053 ZNF865P0CJ78 1059 aaPredicted RBP8.67□□□□□ -1.02
HMGCR-211ENST00000512053 MS4A1P11836 297 aa8.67□□□□□ -1.02
HMGCR-211ENST00000512053 ITGB8P26012 769 aa8.67□□□□□ -1.02
HMGCR-211ENST00000512053 ACLYP53396 1101 aa8.67□□□□□ -1.02
HMGCR-211ENST00000512053 FAAP100Q0VG06 881 aa8.67□□□□□ -1.02
HMGCR-211ENST00000512053 GRIN2CQ14957 1233 aa8.67□□□□□ -1.02
HMGCR-211ENST00000512053 KCNA10Q16322 511 aa8.67□□□□□ -1.02
HMGCR-211ENST00000512053 KIAA1755Q5JYT7 1200 aa8.67□□□□□ -1.02
HMGCR-211ENST00000512053 FAM83BQ5T0W9 1011 aa8.67□□□□□ -1.02
HMGCR-211ENST00000512053 C12orf60Q5U649 245 aa8.67□□□□□ -1.02
HMGCR-211ENST00000512053 MFSD5Q6N075 450 aa8.67□□□□□ -1.02
HMGCR-211ENST00000512053 ZSCAN25Q6NSZ9 544 aa8.67□□□□□ -1.02
HMGCR-211ENST00000512053 SIAH1Q8IUQ4 282 aa8.67□□□□□ -1.02
HMGCR-211ENST00000512053 SLF1Q9BQI6 1058 aa8.67□□□□□ -1.02
HMGCR-211ENST00000512053 MTIF3Q9H2K0 278 aaKnown RBP8.67□□□□□ -1.02
HMGCR-211ENST00000512053 PAG1Q9NWQ8 432 aa8.67□□□□□ -1.02
HMGCR-211ENST00000512053 RABGEF1Q9UJ41 708 aa8.67□□□□□ -1.02
HMGCR-211ENST00000512053 MSRAQ9UJ68 235 aa8.67□□□□□ -1.02
HMGCR-211ENST00000512053 PPP1R9AQ9ULJ8 1098 aa8.67□□□□□ -1.02
HMGCR-211ENST00000512053 ADAMTS5Q9UNA0 930 aa8.67□□□□□ -1.02
HMGCR-211ENST00000512053 SLC4A4Q9Y6R1 1079 aa8.67□□□□□ -1.02
HMGCR-211ENST00000512053 SIPA1L1O43166 1804 aa8.66□□□□□ -1.02
HMGCR-211ENST00000512053 SYNGAP1Q96PV0 1343 aa8.66□□□□□ -1.02
HMGCR-211ENST00000512053 A0A0U1RQG5 324 aaPredicted RBP8.66□□□□□ -1.02
HMGCR-211ENST00000512053 PPP1R3GB7ZBB8 358 aa8.66□□□□□ -1.02
HMGCR-211ENST00000512053 PRKAB2O43741 272 aa8.66□□□□□ -1.02
HMGCR-211ENST00000512053 DUSP11O75319 330 aaKnown RBP8.66□□□□□ -1.02
HMGCR-211ENST00000512053 C6orf222P0C671 652 aaPredicted RBP8.66□□□□□ -1.02
HMGCR-211ENST00000512053 TAL1P17542 331 aaPredicted RBP8.66□□□□□ -1.02
HMGCR-211ENST00000512053 EPHB4P54760 987 aa8.66□□□□□ -1.02
HMGCR-211ENST00000512053 SNRNP48Q6IEG0 339 aaKnown RBP8.66□□□□□ -1.02
HMGCR-211ENST00000512053 C16orf86Q6ZW13 317 aa8.66□□□□□ -1.02
HMGCR-211ENST00000512053 NOL8Q76FK4 1167 aaKnown RBP8.66□□□□□ -1.02
HMGCR-211ENST00000512053 CLEC10AQ8IUN9 316 aa8.66□□□□□ -1.02
HMGCR-211ENST00000512053 RPAP2Q8IXW5 612 aaPredicted RBP8.66□□□□□ -1.02
HMGCR-211ENST00000512053 ANKRD35Q8N283 1001 aa8.66□□□□□ -1.02
HMGCR-211ENST00000512053 PRPF38AQ8NAV1 312 aaKnown RBP8.66□□□□□ -1.02
HMGCR-211ENST00000512053 ATXN2LQ8WWM7 1075 aaKnown RBP8.66□□□□□ -1.02
HMGCR-211ENST00000512053 TEX13BQ9BXU2 312 aa8.66□□□□□ -1.02
HMGCR-211ENST00000512053 CHMP4BQ9H444 224 aaKnown RBP8.66□□□□□ -1.02
HMGCR-211ENST00000512053 MKNK2Q9HBH9 465 aa8.66□□□□□ -1.02
HMGCR-211ENST00000512053 ZNF287Q9HBT7 754 aa8.66□□□□□ -1.02
HMGCR-211ENST00000512053 FBXO28Q9NVF7 368 aa8.66□□□□□ -1.02
HMGCR-211ENST00000512053 FBXO40Q9UH90 709 aa8.66□□□□□ -1.02
HMGCR-211ENST00000512053 DOCK3Q8IZD9 2030 aa8.65□□□□□ -1.02
HMGCR-211ENST00000512053 SYNRGQ9UMZ2 1314 aa8.65□□□□□ -1.02
HMGCR-211ENST00000512053 TCRBV5S4A2TA0A5A2 114 aa8.65□□□□□ -1.02
HMGCR-211ENST00000512053 RAB11FIP3O75154 756 aa8.65□□□□□ -1.02
HMGCR-211ENST00000512053 ADAMTS4O75173 837 aa8.65□□□□□ -1.02
HMGCR-211ENST00000512053 ASGR1P07306 291 aa8.65□□□□□ -1.02
HMGCR-211ENST00000512053 IGFBP4P22692 258 aa8.65□□□□□ -1.02
HMGCR-211ENST00000512053 ADD2P35612 726 aa8.65□□□□□ -1.02
HMGCR-211ENST00000512053 ACVR2BQ13705 512 aa8.65□□□□□ -1.02
HMGCR-211ENST00000512053 RAB30Q15771 203 aa8.65□□□□□ -1.02
HMGCR-211ENST00000512053 PROX2Q3B8N5 592 aa8.65□□□□□ -1.02
HMGCR-211ENST00000512053 GNASQ5JWF2 1037 aa8.65□□□□□ -1.02
HMGCR-211ENST00000512053 PSRC1Q6PGN9 363 aaPredicted RBP8.65□□□□□ -1.02
HMGCR-211ENST00000512053 MAMDC4Q6UXC1 1216 aa8.65□□□□□ -1.02
HMGCR-211ENST00000512053 CPXCR1Q8N123 301 aa8.65□□□□□ -1.02
HMGCR-211ENST00000512053 ANKK1Q8NFD2 765 aa8.65□□□□□ -1.02
HMGCR-211ENST00000512053 LENG1Q96BZ8 264 aaPredicted RBP8.65□□□□□ -1.02
HMGCR-211ENST00000512053 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.65□□□□□ -1.027e-22■□□□□ 9
HMGCR-211ENST00000512053 BOLA2Q9H3K6 86 aa8.65□□□□□ -1.02
HMGCR-211ENST00000512053 ABHD16BQ9H3Z7 469 aa8.65□□□□□ -1.02
HMGCR-211ENST00000512053 SLC28A3Q9HAS3 691 aa8.65□□□□□ -1.02
HMGCR-211ENST00000512053 ARPP21Q9UBL0 812 aaPredicted RBP8.65□□□□□ -1.02
HMGCR-211ENST00000512053 ZNF214Q9UL59 606 aaPredicted RBP8.65□□□□□ -1.02
HMGCR-211ENST00000512053 ROBO3Q96MS0 1386 aa8.64□□□□□ -1.03
HMGCR-211ENST00000512053 CYP2D7A0A087X1C5 515 aa8.64□□□□□ -1.03
HMGCR-211ENST00000512053 F5H6K3 240 aa8.64□□□□□ -1.03
HMGCR-211ENST00000512053 ARVCFO00192 962 aa8.64□□□□□ -1.03
HMGCR-211ENST00000512053 ZEB2O60315 1214 aa8.64□□□□□ -1.03
HMGCR-211ENST00000512053 SNAI1O95863 264 aaPredicted RBP8.64□□□□□ -1.03
HMGCR-211ENST00000512053 FGBP02675 491 aa8.64□□□□□ -1.03
HMGCR-211ENST00000512053 RLBP1P12271 317 aa8.64□□□□□ -1.03
HMGCR-211ENST00000512053 CSF2RAP15509 400 aa8.64□□□□□ -1.03
HMGCR-211ENST00000512053 ATP5JP18859 108 aa8.64□□□□□ -1.03
HMGCR-211ENST00000512053 COL9A1P20849 921 aa8.64□□□□□ -1.03
HMGCR-211ENST00000512053 CST5P28325 142 aaPredicted RBP8.64□□□□□ -1.03
HMGCR-211ENST00000512053 MRPS5P82675 430 aaKnown RBP8.64□□□□□ -1.03
HMGCR-211ENST00000512053 KLRC3Q07444 240 aa8.64□□□□□ -1.03
HMGCR-211ENST00000512053 UBE3CQ15386 1083 aa8.64□□□□□ -1.03
HMGCR-211ENST00000512053 AKNAD1Q5T1N1 836 aa8.64□□□□□ -1.03
HMGCR-211ENST00000512053 CTR9Q6PD62 1173 aa8.64□□□□□ -1.03
HMGCR-211ENST00000512053 ZNF444Q8N0Y2 327 aaPredicted RBP8.64□□□□□ -1.03
HMGCR-211ENST00000512053 KLHDC9Q8NEP7 349 aa8.64□□□□□ -1.03
HMGCR-211ENST00000512053 CHST13Q8NET6 341 aa8.64□□□□□ -1.03
HMGCR-211ENST00000512053 KIFC2Q96AC6 838 aa8.64□□□□□ -1.03
HMGCR-211ENST00000512053 PPP1R12CQ9BZL4 782 aa8.64□□□□□ -1.03
HMGCR-211ENST00000512053 PRDM12Q9H4Q4 367 aa8.64□□□□□ -1.03
HMGCR-211ENST00000512053 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.64□□□□□ -1.03
HMGCR-211ENST00000512053 NYAP2Q9P242 653 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms