RNA–Protein interactions for RNA: ENST00000511831.1

YIPF3-215, Transcript of Yip1 domain family member 3, humanhuman

TSL 4

Gene YIPF3, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-215ENST00000511831 USP17L12C9JPN9 530 aa12.4□□□□□ -0.42
YIPF3-215ENST00000511831 USP17L21D6R901 530 aa12.4□□□□□ -0.42
YIPF3-215ENST00000511831 RLBP1P12271 317 aa12.4□□□□□ -0.42
YIPF3-215ENST00000511831 KRT40Q6A162 431 aa12.4□□□□□ -0.42
YIPF3-215ENST00000511831 CEP85Q6P2H3 762 aa12.4□□□□□ -0.42
YIPF3-215ENST00000511831 TMED8Q6PL24 325 aaPredicted RBP12.4□□□□□ -0.42
YIPF3-215ENST00000511831 CXCL17Q6UXB2 119 aa12.4□□□□□ -0.42
YIPF3-215ENST00000511831 MAMDC4Q6UXC1 1216 aa12.4□□□□□ -0.42
YIPF3-215ENST00000511831 ARMCX2Q7L311 632 aa12.4□□□□□ -0.42
YIPF3-215ENST00000511831 MSL3Q8N5Y2 521 aaKnown RBP12.4□□□□□ -0.42
YIPF3-215ENST00000511831 PCSK9Q8NBP7 692 aaKnown RBP12.4□□□□□ -0.42
YIPF3-215ENST00000511831 CCDC17Q96LX7 622 aa12.4□□□□□ -0.42
YIPF3-215ENST00000511831 WNT8AQ9H1J5 351 aa12.4□□□□□ -0.42
YIPF3-215ENST00000511831 CERS4Q9HA82 394 aa12.4□□□□□ -0.42
YIPF3-215ENST00000511831 SPC25Q9HBM1 224 aa12.4□□□□□ -0.42
YIPF3-215ENST00000511831 RAVER2Q9HCJ3 691 aaKnown RBP12.4□□□□□ -0.42
YIPF3-215ENST00000511831 EPOPA6NHQ4 379 aa12.39□□□□□ -0.43
YIPF3-215ENST00000511831 NDUFB10O96000 172 aa12.39□□□□□ -0.43
YIPF3-215ENST00000511831 CNTN2Q02246 1040 aa12.39□□□□□ -0.43
YIPF3-215ENST00000511831 NOL8Q76FK4 1167 aaKnown RBP12.39□□□□□ -0.43
YIPF3-215ENST00000511831 KIFC2Q96AC6 838 aa12.39□□□□□ -0.43
YIPF3-215ENST00000511831 VWCEQ96DN2 955 aa12.39□□□□□ -0.43
YIPF3-215ENST00000511831 SCLYQ96I15 445 aa12.39□□□□□ -0.43
YIPF3-215ENST00000511831 LRFN3Q9BTN0 628 aa12.39□□□□□ -0.43
YIPF3-215ENST00000511831 C1QTNF1Q9BXJ1 281 aa12.39□□□□□ -0.43
YIPF3-215ENST00000511831 KATNBL1Q9H079 304 aa12.39□□□□□ -0.43
YIPF3-215ENST00000511831 TRPV6Q9H1D0 765 aa12.39□□□□□ -0.43
YIPF3-215ENST00000511831 TSPYL2Q9H2G4 693 aaPredicted RBP12.39□□□□□ -0.43
YIPF3-215ENST00000511831 MTIF3Q9H2K0 278 aaKnown RBP12.39□□□□□ -0.43
YIPF3-215ENST00000511831 KANSL2Q9H9L4 492 aa12.39□□□□□ -0.43
YIPF3-215ENST00000511831 HOMER2Q9NSB8 354 aa12.39□□□□□ -0.43
YIPF3-215ENST00000511831 GRIN2DO15399 1336 aa12.38□□□□□ -0.43
YIPF3-215ENST00000511831 FAM86C2PA6NEL3 165 aa12.38□□□□□ -0.43
YIPF3-215ENST00000511831 ADD2P35612 726 aa12.38□□□□□ -0.43
YIPF3-215ENST00000511831 PSMC6P62333 389 aa12.38□□□□□ -0.43
YIPF3-215ENST00000511831 ZNF467Q7Z7K2 595 aaPredicted RBP12.38□□□□□ -0.43
YIPF3-215ENST00000511831 FTSJ3Q8IY81 847 aaKnown RBP12.38□□□□□ -0.43
YIPF3-215ENST00000511831 CCDC144CPQ8IYA2 1237 aa12.38□□□□□ -0.43
YIPF3-215ENST00000511831 ANKRD35Q8N283 1001 aa12.38□□□□□ -0.43
YIPF3-215ENST00000511831 KHSRPQ92945 711 aaKnown RBP eCLIP12.38□□□□□ -0.43
YIPF3-215ENST00000511831 NOC4LQ9BVI4 516 aaKnown RBP12.38□□□□□ -0.43
YIPF3-215ENST00000511831 ABHD16BQ9H3Z7 469 aa12.38□□□□□ -0.43
YIPF3-215ENST00000511831 ATP8A2Q9NTI2 1148 aa12.38□□□□□ -0.43
YIPF3-215ENST00000511831 SLC4A7Q9Y6M7 1214 aa12.38□□□□□ -0.43
YIPF3-215ENST00000511831 B4GALT4O60513 344 aa12.37□□□□□ -0.43
YIPF3-215ENST00000511831 ARHGEF15O94989 841 aa12.37□□□□□ -0.43
YIPF3-215ENST00000511831 ITGA7Q13683 1181 aa12.37□□□□□ -0.43
YIPF3-215ENST00000511831 TTLL4Q14679 1199 aa12.37□□□□□ -0.43
YIPF3-215ENST00000511831 TMEM63BQ5T3F8 832 aa12.37□□□□□ -0.43
YIPF3-215ENST00000511831 CTR9Q6PD62 1173 aa12.37□□□□□ -0.43
YIPF3-215ENST00000511831 ERC1Q8IUD2 1116 aa12.37□□□□□ -0.43
YIPF3-215ENST00000511831 SLC43A3Q8NBI5 491 aa12.37□□□□□ -0.43
YIPF3-215ENST00000511831 RHPN1Q8TCX5 695 aa12.37□□□□□ -0.43
YIPF3-215ENST00000511831 CHMP4CQ96CF2 233 aa12.37□□□□□ -0.43
YIPF3-215ENST00000511831 BOLA2Q9H3K6 86 aa12.37□□□□□ -0.43
YIPF3-215ENST00000511831 CTDP1Q9Y5B0 961 aaPredicted RBP12.37□□□□□ -0.43
YIPF3-215ENST00000511831 MTCH2Q9Y6C9 303 aa12.37□□□□□ -0.43
YIPF3-215ENST00000511831 SLC4A4Q9Y6R1 1079 aa12.37□□□□□ -0.43
YIPF3-215ENST00000511831 PRRC2BQ5JSZ5 2229 aaKnown RBP12.37□□□□□ -0.43
YIPF3-215ENST00000511831 F5H6K3 240 aa12.36□□□□□ -0.43
YIPF3-215ENST00000511831 RBAK-RBAKDNI3L0D1 243 aa12.36□□□□□ -0.43
YIPF3-215ENST00000511831 ERC2O15083 957 aa12.36□□□□□ -0.43
YIPF3-215ENST00000511831 ZBED4O75132 1171 aa12.36□□□□□ -0.43
YIPF3-215ENST00000511831 CA3P07451 260 aa12.36□□□□□ -0.43
YIPF3-215ENST00000511831 ATP2A2P16615 1042 aaKnown RBP12.36□□□□□ -0.43
YIPF3-215ENST00000511831 TNFAIP2Q03169 654 aa12.36□□□□□ -0.43
YIPF3-215ENST00000511831 KLRC3Q07444 240 aa12.36□□□□□ -0.43
YIPF3-215ENST00000511831 SPRED2Q7Z698 418 aa12.36□□□□□ -0.43
YIPF3-215ENST00000511831 TLK2Q86UE8 772 aa12.36□□□□□ -0.43
YIPF3-215ENST00000511831 AMOTL1Q8IY63 956 aa12.36□□□□□ -0.43
YIPF3-215ENST00000511831 PPP1R13LQ8WUF5 828 aa12.36□□□□□ -0.43
YIPF3-215ENST00000511831 PAG1Q9NWQ8 432 aa12.36□□□□□ -0.43
YIPF3-215ENST00000511831 HCN4Q9Y3Q4 1203 aa12.36□□□□□ -0.43
YIPF3-215ENST00000511831 PCDHA11Q9Y5I1 949 aa12.36□□□□□ -0.43
YIPF3-215ENST00000511831 TRANK1O15050 2925 aa12.36□□□□□ -0.43
YIPF3-215ENST00000511831 ZBED9Q6R2W3 1325 aa12.36□□□□□ -0.43
YIPF3-215ENST00000511831 GREB1LQ9C091 1923 aaPredicted RBP12.35□□□□□ -0.43
YIPF3-215ENST00000511831 LRRC37A2A6NM11 1700 aa12.35□□□□□ -0.43
YIPF3-215ENST00000511831 SOWAHBA6NEL2 793 aa12.35□□□□□ -0.43
YIPF3-215ENST00000511831 DYNC1LI2O43237 492 aaPredicted RBP12.35□□□□□ -0.43
YIPF3-215ENST00000511831 IFIT2P09913 472 aaKnown RBP12.35□□□□□ -0.43
YIPF3-215ENST00000511831 CYP2C9P11712 490 aa12.35□□□□□ -0.43
YIPF3-215ENST00000511831 RASA1P20936 1047 aa12.35□□□□□ -0.43
YIPF3-215ENST00000511831 FSCN1Q16658 493 aaKnown RBP12.35□□□□□ -0.43
YIPF3-215ENST00000511831 EEPD1Q7L9B9 569 aa12.35□□□□□ -0.43
YIPF3-215ENST00000511831 DEFB128Q7Z7B8 93 aa12.35□□□□□ -0.43
YIPF3-215ENST00000511831 LRRC47Q8N1G4 583 aaKnown RBP12.35□□□□□ -0.43
YIPF3-215ENST00000511831 PRPF38AQ8NAV1 312 aaKnown RBP12.35□□□□□ -0.43
YIPF3-215ENST00000511831 AGBL1Q96MI9 1066 aa12.35□□□□□ -0.43
YIPF3-215ENST00000511831 SLC38A10Q9HBR0 1119 aa12.35□□□□□ -0.43
YIPF3-215ENST00000511831 PDGFCQ9NRA1 345 aa12.35□□□□□ -0.43
YIPF3-215ENST00000511831 CLIP2Q9UDT6 1046 aa12.35□□□□□ -0.43
YIPF3-215ENST00000511831 GNEQ9Y223 722 aaKnown RBP12.35□□□□□ -0.43
YIPF3-215ENST00000511831 ATP2A1O14983 1001 aa12.34□□□□□ -0.43
YIPF3-215ENST00000511831 SMPD1P17405 629 aa12.34□□□□□ -0.43
YIPF3-215ENST00000511831 AAK1Q2M2I8 961 aa12.34□□□□□ -0.43
YIPF3-215ENST00000511831 TMEM31Q5JXX7 168 aa12.34□□□□□ -0.43
YIPF3-215ENST00000511831 FBXO16Q8IX29 292 aaPredicted RBP12.34□□□□□ -0.43
YIPF3-215ENST00000511831 CLASRPQ8N2M8 674 aaKnown RBP12.34□□□□□ -0.43
YIPF3-215ENST00000511831 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms