RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 BTG3Q14201 252 aaPredicted RBP8.1□□□□□ -1.11
CPNE4-208ENST00000511604 STK38Q15208 465 aa8.1□□□□□ -1.11
CPNE4-208ENST00000511604 TSNAXIP1Q2TAA8 658 aa8.1□□□□□ -1.11
CPNE4-208ENST00000511604 NAA16Q6N069 864 aaPredicted RBP8.1□□□□□ -1.11
CPNE4-208ENST00000511604 CCDC70Q6NSX1 233 aa8.1□□□□□ -1.11
CPNE4-208ENST00000511604 SPICE1Q8N0Z3 855 aa8.1□□□□□ -1.11
CPNE4-208ENST00000511604 KIFAP3Q92845 792 aa8.1□□□□□ -1.11
CPNE4-208ENST00000511604 CAPZA3Q96KX2 299 aa8.1□□□□□ -1.11
CPNE4-208ENST00000511604 BRD8Q9H0E9 1235 aa8.1□□□□□ -1.11
CPNE4-208ENST00000511604 DMAP1Q9NPF5 467 aaPredicted RBP8.1□□□□□ -1.11
CPNE4-208ENST00000511604 CWC25Q9NXE8 425 aaPredicted RBP8.1□□□□□ -1.11
CPNE4-208ENST00000511604 TUBE1Q9UJT0 475 aa8.1□□□□□ -1.11
CPNE4-208ENST00000511604 SLC12A4Q9UP95 1085 aa8.1□□□□□ -1.11
CPNE4-208ENST00000511604 MAP2P11137 1827 aaKnown RBP8.1□□□□□ -1.11
CPNE4-208ENST00000511604 ARHGEF28Q8N1W1 1705 aaKnown RBP8.1□□□□□ -1.11
CPNE4-208ENST00000511604 PALM3A6NDB9 673 aaPredicted RBP8.1□□□□□ -1.11
CPNE4-208ENST00000511604 ZNF185O15231 689 aa8.1□□□□□ -1.11
CPNE4-208ENST00000511604 BPIFB4P59827 614 aa8.1□□□□□ -1.11
CPNE4-208ENST00000511604 TAF7Q15545 349 aaPredicted RBP8.1□□□□□ -1.11
CPNE4-208ENST00000511604 GKAP1Q5VSY0 366 aaPredicted RBP8.1□□□□□ -1.11
CPNE4-208ENST00000511604 RNF220Q5VTB9 566 aa8.1□□□□□ -1.11
CPNE4-208ENST00000511604 MAEAQ7L5Y9 396 aa8.1□□□□□ -1.11
CPNE4-208ENST00000511604 METTL16Q86W50 562 aaKnown RBP8.1□□□□□ -1.11
CPNE4-208ENST00000511604 LMNTD2Q8IXW0 634 aa8.1□□□□□ -1.11
CPNE4-208ENST00000511604 GRAMD1CQ8IYS0 662 aa8.1□□□□□ -1.11
CPNE4-208ENST00000511604 SMCR8Q8TEV9 937 aaPredicted RBP8.1□□□□□ -1.11
CPNE4-208ENST00000511604 HDAC7Q8WUI4 952 aa8.1□□□□□ -1.11
CPNE4-208ENST00000511604 RUBCNQ92622 972 aa8.1□□□□□ -1.11
CPNE4-208ENST00000511604 DHRS1Q96LJ7 313 aa8.1□□□□□ -1.11
CPNE4-208ENST00000511604 RMDN2Q96LZ7 410 aa8.1□□□□□ -1.11
CPNE4-208ENST00000511604 FGD4Q96M96 766 aa8.1□□□□□ -1.11
CPNE4-208ENST00000511604 IWS1Q96ST2 819 aa8.1□□□□□ -1.11
CPNE4-208ENST00000511604 ALDH8A1Q9H2A2 487 aaPredicted RBP8.1□□□□□ -1.11
CPNE4-208ENST00000511604 ARHGEF10LQ9HCE6 1279 aa8.1□□□□□ -1.11
CPNE4-208ENST00000511604 TBC1D7Q9P0N9 293 aa8.1□□□□□ -1.11
CPNE4-208ENST00000511604 SWAP70Q9UH65 585 aa8.1□□□□□ -1.11
CPNE4-208ENST00000511604 CEP131Q9UPN4 1083 aa8.1□□□□□ -1.11
CPNE4-208ENST00000511604 USP42Q9H9J4 1324 aaKnown RBP8.1□□□□□ -1.11
CPNE4-208ENST00000511604 HMGB1P1B2RPK0 211 aaPredicted RBP8.09□□□□□ -1.11
CPNE4-208ENST00000511604 PSMD14O00487 310 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 SPTLC2O15270 562 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 CEP104O60308 925 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 TMCC1O94876 653 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 TRIM37O94972 964 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 ATP1A1P05023 1023 aaKnown RBP8.09□□□□□ -1.11
CPNE4-208ENST00000511604 FAM200BP0CF97 657 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 SP100P23497 879 aaPredicted RBP8.09□□□□□ -1.11
CPNE4-208ENST00000511604 CBX3Q13185 183 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 SLC4A8Q2Y0W8 1093 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 CHADLQ6NUI6 762 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 SHC4Q6S5L8 630 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 OLFM4Q6UX06 510 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 ARFGAP2Q8N6H7 521 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 CAVIN3Q969G5 261 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 TEKT1Q969V4 418 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 EVI5LQ96CN4 794 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 ATP6V1G3Q96LB4 118 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 AIFM3Q96NN9 605 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 TRAPPC9Q96Q05 1148 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 MTA3Q9BTC8 594 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 FSD1Q9BTV5 496 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 NACA2Q9H009 215 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.09□□□□□ -1.11
CPNE4-208ENST00000511604 PCDHA5Q9Y5H7 936 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 MROH1Q8NDA8 1641 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 CCT8L1PA6NM43 557 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 PDE2AO00408 941 aaPredicted RBP8.09□□□□□ -1.11
CPNE4-208ENST00000511604 FLOT1O75955 427 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 GFPT2O94808 682 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 SLC7A5Q01650 507 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 SEPT2Q15019 361 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 IFI16Q16666 785 aaKnown RBP8.09□□□□□ -1.11
CPNE4-208ENST00000511604 CCDC92Q53HC0 331 aaPredicted RBP8.09□□□□□ -1.11
CPNE4-208ENST00000511604 CFAP58Q5T655 872 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 PAPD7Q5XG87 772 aaKnown RBP8.09□□□□□ -1.11
CPNE4-208ENST00000511604 BICDL1Q6ZP65 573 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 APBB1IPQ7Z5R6 666 aaPredicted RBP8.09□□□□□ -1.11
CPNE4-208ENST00000511604 PPFIBP1Q86W92 1011 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 SLF2Q8IX21 1173 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 IQCKQ8N0W5 287 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 MLKLQ8NB16 471 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 C1orf131Q8NDD1 294 aaKnown RBP8.09□□□□□ -1.11
CPNE4-208ENST00000511604 CAGE1Q8TC20 777 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 SPIRE2Q8WWL2 714 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 RBM33Q96EV2 1170 aaKnown RBP8.09□□□□□ -1.11
CPNE4-208ENST00000511604 IFT43Q96FT9 208 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 RPS6KC1Q96S38 1066 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 RHBDL2Q9NX52 303 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 DMGDHQ9UI17 866 aaKnown RBP8.09□□□□□ -1.11
CPNE4-208ENST00000511604 PAIP2BQ9ULR5 123 aaKnown RBP8.09□□□□□ -1.11
CPNE4-208ENST00000511604 KIF1BO60333 1816 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 RICTORQ6R327 1708 aa8.09□□□□□ -1.11
CPNE4-208ENST00000511604 SMAPO00193 183 aa8.08□□□□□ -1.12
CPNE4-208ENST00000511604 BACH1O14867 736 aa8.08□□□□□ -1.12
CPNE4-208ENST00000511604 PDHA1P08559 390 aa8.08□□□□□ -1.12
CPNE4-208ENST00000511604 ZNF18P17022 549 aa8.08□□□□□ -1.12
CPNE4-208ENST00000511604 HPDP32754 393 aaPredicted RBP8.08□□□□□ -1.12
CPNE4-208ENST00000511604 FXR1P51114 621 aaKnown RBP eCLIP8.08□□□□□ -1.12
CPNE4-208ENST00000511604 ERVK-24P63145 666 aa8.08□□□□□ -1.12
CPNE4-208ENST00000511604 CACNB1Q02641 598 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms