RNA–Protein interactions for RNA: ENST00000511459.1

APBB3-217, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 4

Gene APBB3, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-217	ENST00000511459	TYW1B	Q6NUM6	668 aa		13.58	□□□□□ -0.24
APBB3-217	ENST00000511459	RGMB	Q6NW40	437 aa		13.58	□□□□□ -0.24
APBB3-217	ENST00000511459	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.58	□□□□□ -0.24
APBB3-217	ENST00000511459	RASAL3	Q86YV0	1011 aa		13.58	□□□□□ -0.24
APBB3-217	ENST00000511459	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.58	□□□□□ -0.24
APBB3-217	ENST00000511459	MS4A4A	Q96JQ5	239 aa		13.58	□□□□□ -0.24
APBB3-217	ENST00000511459	ANP32E	Q9BTT0	268 aa		13.58	□□□□□ -0.24
APBB3-217	ENST00000511459	PHF20	Q9BVI0	1012 aa		13.58	□□□□□ -0.24
APBB3-217	ENST00000511459	SH3GLB2	Q9NR46	395 aa		13.58	□□□□□ -0.24
APBB3-217	ENST00000511459	LOC285556	D6RIA3	1793 aa		13.58	□□□□□ -0.24
APBB3-217	ENST00000511459	hCG_1984214	I3L0E3	225 aa		13.57	□□□□□ -0.24
APBB3-217	ENST00000511459	MMP1	P03956	469 aa		13.57	□□□□□ -0.24
APBB3-217	ENST00000511459	DSG3	P32926	999 aa		13.57	□□□□□ -0.24
APBB3-217	ENST00000511459	ZNF713	Q8N859	430 aa	Predicted RBP	13.57	□□□□□ -0.24
APBB3-217	ENST00000511459	COA7	Q96BR5	231 aa		13.57	□□□□□ -0.24
APBB3-217	ENST00000511459	HOXC10	Q9NYD6	342 aa		13.57	□□□□□ -0.24
APBB3-217	ENST00000511459	ADAMTS5	Q9UNA0	930 aa		13.57	□□□□□ -0.24
APBB3-217	ENST00000511459	AGTPBP1	Q9UPW5	1226 aa		13.57	□□□□□ -0.24
APBB3-217	ENST00000511459	BAG4	O95429	457 aa	Known RBP	13.56	□□□□□ -0.24
APBB3-217	ENST00000511459	F13A1	P00488	732 aa		13.56	□□□□□ -0.24
APBB3-217	ENST00000511459	FDX1	P10109	184 aa		13.56	□□□□□ -0.24
APBB3-217	ENST00000511459	CETP	P11597	493 aa		13.56	□□□□□ -0.24
APBB3-217	ENST00000511459	NAPA	P54920	295 aa		13.56	□□□□□ -0.24
APBB3-217	ENST00000511459	REST	Q13127	1097 aa		13.56	□□□□□ -0.24
APBB3-217	ENST00000511459	CCDC174	Q6PII3	467 aa		13.56	□□□□□ -0.24
APBB3-217	ENST00000511459	CLEC17A	Q6ZS10	378 aa		13.56	□□□□□ -0.24
APBB3-217	ENST00000511459	FERMT3	Q86UX7	667 aa		13.56	□□□□□ -0.24
APBB3-217	ENST00000511459	FBXO11	Q86XK2	927 aa		13.56	□□□□□ -0.24
APBB3-217	ENST00000511459	FAM177A1	Q8N128	213 aa	Predicted RBP	13.56	□□□□□ -0.24
APBB3-217	ENST00000511459	ATG4C	Q96DT6	458 aa		13.56	□□□□□ -0.24
APBB3-217	ENST00000511459	AMN	Q9BXJ7	453 aa		13.56	□□□□□ -0.24
APBB3-217	ENST00000511459	SLC38A10	Q9HBR0	1119 aa		13.56	□□□□□ -0.24
APBB3-217	ENST00000511459	ABT1	Q9ULW3	272 aa	Known RBP	13.56	□□□□□ -0.24
APBB3-217	ENST00000511459	MYPN	Q86TC9	1320 aa		13.56	□□□□□ -0.24
APBB3-217	ENST00000511459	RLF	Q13129	1914 aa		13.56	□□□□□ -0.24
APBB3-217	ENST00000511459	CCL15-CCL14	A0A0B4J2E2	113 aa		13.55	□□□□□ -0.24
APBB3-217	ENST00000511459	SMCO2	A6NFE2	343 aa		13.55	□□□□□ -0.24
APBB3-217	ENST00000511459	BTBD18	B2RXH4	712 aa		13.55	□□□□□ -0.24
APBB3-217	ENST00000511459	VWA5A	O00534	786 aa		13.55	□□□□□ -0.24
APBB3-217	ENST00000511459	ZBED4	O75132	1171 aa		13.55	□□□□□ -0.24
APBB3-217	ENST00000511459	SLC10A3	P09131	477 aa		13.55	□□□□□ -0.24
APBB3-217	ENST00000511459	NCL	P19338	710 aa	Known RBP	13.55	□□□□□ -0.24
APBB3-217	ENST00000511459	NLRP5	P59047	1200 aa		13.55	□□□□□ -0.24
APBB3-217	ENST00000511459	KIF23	Q02241	960 aa	Predicted RBP	13.55	□□□□□ -0.24
APBB3-217	ENST00000511459	SAFB	Q15424	915 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
APBB3-217	ENST00000511459	NPY5R	Q15761	445 aa		13.55	□□□□□ -0.24
APBB3-217	ENST00000511459	CCL15	Q16663	113 aa		13.55	□□□□□ -0.24
APBB3-217	ENST00000511459	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.55	□□□□□ -0.24
APBB3-217	ENST00000511459	MCTP1	Q6DN14	999 aa		13.55	□□□□□ -0.24
APBB3-217	ENST00000511459	PPP1R18	Q6NYC8	613 aa		13.55	□□□□□ -0.24
APBB3-217	ENST00000511459	REPS2	Q8NFH8	660 aa		13.55	□□□□□ -0.24
APBB3-217	ENST00000511459	CCDC148	Q8NFR7	591 aa		13.55	□□□□□ -0.24
APBB3-217	ENST00000511459	OXER1	Q8TDS5	423 aa		13.55	□□□□□ -0.24
APBB3-217	ENST00000511459	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.55	□□□□□ -0.24
APBB3-217	ENST00000511459	BRI3BP	Q8WY22	251 aa		13.55	□□□□□ -0.24
APBB3-217	ENST00000511459	HHIPL1	Q96JK4	782 aa		13.55	□□□□□ -0.24
APBB3-217	ENST00000511459	P2RX7	Q99572	595 aa	Known RBP	13.55	□□□□□ -0.24
APBB3-217	ENST00000511459	ZMYND12	Q9H0C1	365 aa		13.55	□□□□□ -0.24
APBB3-217	ENST00000511459	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.55	□□□□□ -0.24
APBB3-217	ENST00000511459	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.55	□□□□□ -0.24
APBB3-217	ENST00000511459	PCDHA1	Q9Y5I3	950 aa		13.55	□□□□□ -0.24
APBB3-217	ENST00000511459	ZNF536	O15090	1300 aa		13.55	□□□□□ -0.24
APBB3-217	ENST00000511459	PARP14	Q460N5	1801 aa		13.55	□□□□□ -0.24
APBB3-217	ENST00000511459	ESYT2	A0FGR8	921 aa		13.54	□□□□□ -0.24
APBB3-217	ENST00000511459	TESPA1	A2RU30	521 aa	Predicted RBP	13.54	□□□□□ -0.24
APBB3-217	ENST00000511459	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.54	□□□□□ -0.24
APBB3-217	ENST00000511459	FAM155A	B1AL88	458 aa	Predicted RBP	13.54	□□□□□ -0.24
APBB3-217	ENST00000511459	KIF28P	B7ZC32	967 aa		13.54	□□□□□ -0.24
APBB3-217	ENST00000511459	ADAMTS3	O15072	1205 aa		13.54	□□□□□ -0.24
APBB3-217	ENST00000511459	ICAM1	P05362	532 aa		13.54	□□□□□ -0.24
APBB3-217	ENST00000511459	TAL1	P17542	331 aa	Predicted RBP	13.54	□□□□□ -0.24
APBB3-217	ENST00000511459	OSBP	P22059	807 aa		13.54	□□□□□ -0.24
APBB3-217	ENST00000511459	CALML3	P27482	149 aa		13.54	□□□□□ -0.24
APBB3-217	ENST00000511459	KRT2	P35908	639 aa		13.54	□□□□□ -0.24
APBB3-217	ENST00000511459	TRAF1	Q13077	416 aa		13.54	□□□□□ -0.24
APBB3-217	ENST00000511459	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
APBB3-217	ENST00000511459	GALNT17	Q6IS24	598 aa		13.54	□□□□□ -0.24
APBB3-217	ENST00000511459	POTEE	Q6S8J3	1075 aa		13.54	□□□□□ -0.24
APBB3-217	ENST00000511459	DIS3L2	Q8IYB7	885 aa	Known RBP	13.54	□□□□□ -0.24
APBB3-217	ENST00000511459	CCDC102A	Q96A19	550 aa		13.54	□□□□□ -0.24
APBB3-217	ENST00000511459	AGBL1	Q96MI9	1066 aa		13.54	□□□□□ -0.24
APBB3-217	ENST00000511459	RAVER2	Q9HCJ3	691 aa	Known RBP	13.54	□□□□□ -0.24
APBB3-217	ENST00000511459	C6orf50	Q9HD87	102 aa		13.54	□□□□□ -0.24
APBB3-217	ENST00000511459	PCDHA4	Q9UN74	947 aa		13.54	□□□□□ -0.24
APBB3-217	ENST00000511459	MYH15	Q9Y2K3	1946 aa		13.54	□□□□□ -0.24
APBB3-217	ENST00000511459	BTBD19	C9JJ37	291 aa		13.53	□□□□□ -0.24
APBB3-217	ENST00000511459	U2AF2	P26368	475 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
APBB3-217	ENST00000511459	GNA11	P29992	359 aa		13.53	□□□□□ -0.24
APBB3-217	ENST00000511459	IRX3	P78415	501 aa	Predicted RBP	13.53	□□□□□ -0.24
APBB3-217	ENST00000511459	GNL2	Q13823	731 aa	Known RBP	13.53	□□□□□ -0.24
APBB3-217	ENST00000511459	USH1G	Q495M9	461 aa		13.53	□□□□□ -0.24
APBB3-217	ENST00000511459	ANKRD23	Q86SG2	305 aa		13.53	□□□□□ -0.24
APBB3-217	ENST00000511459	BLID	Q8IZY5	108 aa		13.53	□□□□□ -0.24
APBB3-217	ENST00000511459	CPXCR1	Q8N123	301 aa		13.53	□□□□□ -0.24
APBB3-217	ENST00000511459	DAGLB	Q8NCG7	672 aa		13.53	□□□□□ -0.24
APBB3-217	ENST00000511459	PTPN18	Q99952	460 aa		13.53	□□□□□ -0.24
APBB3-217	ENST00000511459	FOXP1	Q9H334	677 aa	Predicted RBP	13.53	□□□□□ -0.24
APBB3-217	ENST00000511459	SLC45A1	Q9Y2W3	748 aa		13.53	□□□□□ -0.24
APBB3-217	ENST00000511459	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.53	□□□□□ -0.24
APBB3-217	ENST00000511459	MANSC4	A6NHS7	340 aa	Predicted RBP	13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms