RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 LCE4AQ5TA78 99 aa5.65□□□□□ -1.5
TOPBP1-208ENST00000511439 LCNL1Q6ZST4 164 aa5.65□□□□□ -1.5
TOPBP1-208ENST00000511439 FBXO27Q8NI29 283 aa5.65□□□□□ -1.5
TOPBP1-208ENST00000511439 LRRC3Q9BY71 257 aa5.65□□□□□ -1.5
TOPBP1-208ENST00000511439 RNF32Q9H0A6 362 aa5.65□□□□□ -1.5
TOPBP1-208ENST00000511439 ASCC2Q9H1I8 757 aaPredicted RBP5.65□□□□□ -1.5
TOPBP1-208ENST00000511439 CCSER2Q9H7U1 834 aa5.65□□□□□ -1.5
TOPBP1-208ENST00000511439 UBP1Q9NZI7 540 aa5.65□□□□□ -1.5
TOPBP1-208ENST00000511439 MYO3AQ8NEV4 1616 aa5.65□□□□□ -1.51
TOPBP1-208ENST00000511439 UGGT2Q9NYU1 1516 aa5.64□□□□□ -1.51
TOPBP1-208ENST00000511439 VWDEQ8N2E2 1590 aa5.64□□□□□ -1.51
TOPBP1-208ENST00000511439 WASH4PA8MWX3 477 aa5.64□□□□□ -1.51
TOPBP1-208ENST00000511439 UPK3BL1B0FP48 263 aa5.64□□□□□ -1.51
TOPBP1-208ENST00000511439 UPK3BL2E5RIL1 263 aa5.64□□□□□ -1.51
TOPBP1-208ENST00000511439 ETV2O00321 342 aaPredicted RBP5.64□□□□□ -1.51
TOPBP1-208ENST00000511439 RANGAP1P46060 587 aaPredicted RBP5.64□□□□□ -1.51
TOPBP1-208ENST00000511439 GJA8P48165 433 aa5.64□□□□□ -1.51
TOPBP1-208ENST00000511439 PAK2Q13177 524 aa5.64□□□□□ -1.51
TOPBP1-208ENST00000511439 CLEC16AQ2KHT3 1053 aa5.64□□□□□ -1.51
TOPBP1-208ENST00000511439 ANKS4BQ8N8V4 417 aa5.64□□□□□ -1.51
TOPBP1-208ENST00000511439 KREMEN1Q96MU8 473 aa5.64□□□□□ -1.51
TOPBP1-208ENST00000511439 KRTAP4-9Q9BYQ8 210 aa5.64□□□□□ -1.51
TOPBP1-208ENST00000511439 REV1Q9UBZ9 1251 aa5.64□□□□□ -1.51
TOPBP1-208ENST00000511439 PCDHA11Q9Y5I1 949 aa5.64□□□□□ -1.51
TOPBP1-208ENST00000511439 CDK13Q14004 1512 aaKnown RBP5.64□□□□□ -1.51
TOPBP1-208ENST00000511439 PEX10O60683 326 aa5.63□□□□□ -1.51
TOPBP1-208ENST00000511439 SEMA7AO75326 666 aa5.63□□□□□ -1.51
TOPBP1-208ENST00000511439 HTR3BO95264 441 aa5.63□□□□□ -1.51
TOPBP1-208ENST00000511439 APOBRQ0VD83 1088 aa5.63□□□□□ -1.51
TOPBP1-208ENST00000511439 CWF19L2Q2TBE0 894 aaKnown RBP5.63□□□□□ -1.51
TOPBP1-208ENST00000511439 MEX3CQ5U5Q3 659 aaKnown RBP5.63□□□□□ -1.51
TOPBP1-208ENST00000511439 REC114Q7Z4M0 266 aa5.63□□□□□ -1.51
TOPBP1-208ENST00000511439 SLITRK4Q8IW52 837 aa5.63□□□□□ -1.51
TOPBP1-208ENST00000511439 PHACTR4Q8IZ21 702 aa5.63□□□□□ -1.51
TOPBP1-208ENST00000511439 ENOX1Q8TC92 643 aaKnown RBP5.63□□□□□ -1.51
TOPBP1-208ENST00000511439 RASGRP4Q8TDF6 673 aa5.63□□□□□ -1.51
TOPBP1-208ENST00000511439 KLHL3Q9UH77 587 aa5.63□□□□□ -1.51
TOPBP1-208ENST00000511439 SMG5Q9UPR3 1016 aaKnown RBP5.63□□□□□ -1.51
TOPBP1-208ENST00000511439 YBX2Q9Y2T7 364 aaKnown RBP5.63□□□□□ -1.51
TOPBP1-208ENST00000511439 FAM135BQ49AJ0 1406 aa5.63□□□□□ -1.51
TOPBP1-208ENST00000511439 TLR3O15455 904 aaKnown RBP5.62□□□□□ -1.51
TOPBP1-208ENST00000511439 TRHRP34981 398 aaPredicted RBP5.62□□□□□ -1.51
TOPBP1-208ENST00000511439 LINC00310P59036 64 aa5.62□□□□□ -1.51
TOPBP1-208ENST00000511439 ZC3H6P61129 1189 aaKnown RBP5.62□□□□□ -1.51
TOPBP1-208ENST00000511439 RNF4P78317 190 aa5.62□□□□□ -1.51
TOPBP1-208ENST00000511439 LILRA6Q6PI73 481 aa5.62□□□□□ -1.51
TOPBP1-208ENST00000511439 NKD1Q969G9 470 aa5.62□□□□□ -1.51
TOPBP1-208ENST00000511439 GPRASP2Q96D09 838 aa5.62□□□□□ -1.51
TOPBP1-208ENST00000511439 SPATA32Q96LK8 384 aa5.62□□□□□ -1.51
TOPBP1-208ENST00000511439 TINF2Q9BSI4 451 aa5.62□□□□□ -1.51
TOPBP1-208ENST00000511439 SP110Q9HB58 689 aa5.62□□□□□ -1.51
TOPBP1-208ENST00000511439 INPP5FQ9Y2H2 1132 aa5.62□□□□□ -1.51
TOPBP1-208ENST00000511439 JCADQ9P266 1359 aa5.62□□□□□ -1.51
TOPBP1-208ENST00000511439 RGS12O14924 1447 aa5.62□□□□□ -1.51
TOPBP1-208ENST00000511439 AGLP35573 1532 aa5.62□□□□□ -1.51
TOPBP1-208ENST00000511439 NHSL1Q5SYE7 1610 aa5.62□□□□□ -1.51
TOPBP1-208ENST00000511439 POLR1AO95602 1720 aaPredicted RBP5.62□□□□□ -1.51
TOPBP1-208ENST00000511439 NUAK1O60285 661 aa5.61□□□□□ -1.51
TOPBP1-208ENST00000511439 GBP1P32455 592 aa5.61□□□□□ -1.51
TOPBP1-208ENST00000511439 SEZ6Q53EL9 994 aa5.61□□□□□ -1.51
TOPBP1-208ENST00000511439 RNF111Q6ZNA4 994 aa5.61□□□□□ -1.51
TOPBP1-208ENST00000511439 BAHD1Q8TBE0 780 aaPredicted RBP5.61□□□□□ -1.51
TOPBP1-208ENST00000511439 INTS4Q96HW7 963 aaKnown RBP5.61□□□□□ -1.51
TOPBP1-208ENST00000511439 NEURL4Q96JN8 1562 aa5.61□□□□□ -1.51
TOPBP1-208ENST00000511439 C8orf37Q96NL8 207 aa5.61□□□□□ -1.51
TOPBP1-208ENST00000511439 C19orf44Q9H6X5 657 aa5.61□□□□□ -1.51
TOPBP1-208ENST00000511439 CAPN10Q9HC96 672 aa5.61□□□□□ -1.51
TOPBP1-208ENST00000511439 BRMS1Q9HCU9 246 aa5.61□□□□□ -1.51
TOPBP1-208ENST00000511439 POLR3KQ9Y2Y1 108 aaPredicted RBP5.61□□□□□ -1.51
TOPBP1-208ENST00000511439 REREQ9P2R6 1566 aa5.6□□□□□ -1.51
TOPBP1-208ENST00000511439 CHURC1-FNTBB4DL54 471 aa5.6□□□□□ -1.51
TOPBP1-208ENST00000511439 RGS13O14921 159 aa5.6□□□□□ -1.51
TOPBP1-208ENST00000511439 LRRN2O75325 713 aa5.6□□□□□ -1.51
TOPBP1-208ENST00000511439 TEKQ02763 1124 aa5.6□□□□□ -1.51
TOPBP1-208ENST00000511439 COL9A2Q14055 689 aaPredicted RBP5.6□□□□□ -1.51
TOPBP1-208ENST00000511439 TMEM132EQ6IEE7 984 aa5.6□□□□□ -1.51
TOPBP1-208ENST00000511439 TTLL10Q6ZVT0 673 aa5.6□□□□□ -1.51
TOPBP1-208ENST00000511439 REXO1Q8N1G1 1221 aaKnown RBP5.6□□□□□ -1.51
TOPBP1-208ENST00000511439 SYTL5Q8TDW5 730 aaPredicted RBP5.6□□□□□ -1.51
TOPBP1-208ENST00000511439 KRTAP4-2Q9BYR5 136 aa5.6□□□□□ -1.51
TOPBP1-208ENST00000511439 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.6□□□□□ -1.51
TOPBP1-208ENST00000511439 KCNK12Q9HB15 430 aa5.6□□□□□ -1.51
TOPBP1-208ENST00000511439 GPR160Q9UJ42 338 aa5.6□□□□□ -1.51
TOPBP1-208ENST00000511439 MROH2AA6NES4 1674 aa5.59□□□□□ -1.51
TOPBP1-208ENST00000511439 KDM5CP41229 1560 aa5.59□□□□□ -1.51
TOPBP1-208ENST00000511439 TEX51A0A1B0GUA7 166 aa5.59□□□□□ -1.51
TOPBP1-208ENST00000511439 GRIN3BO60391 1043 aa5.59□□□□□ -1.51
TOPBP1-208ENST00000511439 ATE1O95260 518 aa5.59□□□□□ -1.51
TOPBP1-208ENST00000511439 PDE6BP35913 854 aa5.59□□□□□ -1.51
TOPBP1-208ENST00000511439 SOX9P48436 509 aa5.59□□□□□ -1.51
TOPBP1-208ENST00000511439 ZNF165P49910 485 aa5.59□□□□□ -1.51
TOPBP1-208ENST00000511439 C1QTNF8P60827 252 aa5.59□□□□□ -1.51
TOPBP1-208ENST00000511439 DLG4P78352 724 aa5.59□□□□□ -1.51
TOPBP1-208ENST00000511439 NMIQ13287 307 aaPredicted RBP5.59□□□□□ -1.51
TOPBP1-208ENST00000511439 GNL2Q13823 731 aaKnown RBP5.59□□□□□ -1.51
TOPBP1-208ENST00000511439 NAALADL2Q58DX5 795 aa5.59□□□□□ -1.51
TOPBP1-208ENST00000511439 ZNF605Q86T29 641 aa5.59□□□□□ -1.51
TOPBP1-208ENST00000511439 SLC43A3Q8NBI5 491 aa5.59□□□□□ -1.51
TOPBP1-208ENST00000511439 DAGLBQ8NCG7 672 aa5.59□□□□□ -1.51
TOPBP1-208ENST00000511439 LINC01599Q8WXQ3 324 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms