RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 THAP3Q8WTV1 239 aaPredicted RBP5.02□□□□□ -1.61
TRAPPC11-207ENST00000511409 BTN2A2Q8WVV5 523 aa5.02□□□□□ -1.61
TRAPPC11-207ENST00000511409 TCTN2Q96GX1 697 aa5.02□□□□□ -1.61
TRAPPC11-207ENST00000511409 SGSM3Q96HU1 749 aa5.02□□□□□ -1.61
TRAPPC11-207ENST00000511409 RCC1LQ96I51 464 aaKnown RBP5.02□□□□□ -1.61
TRAPPC11-207ENST00000511409 HRASLS5Q96KN8 279 aa5.02□□□□□ -1.61
TRAPPC11-207ENST00000511409 RNPC3Q96LT9 517 aaKnown RBP5.02□□□□□ -1.61
TRAPPC11-207ENST00000511409 IPO9Q96P70 1041 aaKnown RBP5.02□□□□□ -1.61
TRAPPC11-207ENST00000511409 CDC6Q99741 560 aa5.02□□□□□ -1.61
TRAPPC11-207ENST00000511409 HDAC8Q9BY41 377 aa5.02□□□□□ -1.61
TRAPPC11-207ENST00000511409 PRR13Q9NZ81 148 aa5.02□□□□□ -1.61
TRAPPC11-207ENST00000511409 DUSP13Q9UII6 198 aa5.02□□□□□ -1.61
TRAPPC11-207ENST00000511409 EMC9Q9Y3B6 208 aa5.02□□□□□ -1.61
TRAPPC11-207ENST00000511409 TBX22Q9Y458 520 aa5.02□□□□□ -1.61
TRAPPC11-207ENST00000511409 TRAV20A0A0B4J274 112 aa5.01□□□□□ -1.61
TRAPPC11-207ENST00000511409 CD3EP07766 207 aa5.01□□□□□ -1.61
TRAPPC11-207ENST00000511409 SYPP08247 313 aa5.01□□□□□ -1.61
TRAPPC11-207ENST00000511409 FAM153BP0C7A2 387 aa5.01□□□□□ -1.61
TRAPPC11-207ENST00000511409 SRFP11831 508 aa5.01□□□□□ -1.61
TRAPPC11-207ENST00000511409 KCNJ6P48051 423 aa5.01□□□□□ -1.61
TRAPPC11-207ENST00000511409 AMPD2Q01433 879 aa5.01□□□□□ -1.61
TRAPPC11-207ENST00000511409 POU4F1Q01851 419 aa5.01□□□□□ -1.61
TRAPPC11-207ENST00000511409 C2orf27AQ580R0 203 aa5.01□□□□□ -1.61
TRAPPC11-207ENST00000511409 TSPYL5Q86VY4 417 aaPredicted RBP5.01□□□□□ -1.61
TRAPPC11-207ENST00000511409 CREG2Q8IUH2 290 aa5.01□□□□□ -1.61
TRAPPC11-207ENST00000511409 TRIM59Q8IWR1 403 aa5.01□□□□□ -1.61
TRAPPC11-207ENST00000511409 TP53INP2Q8IXH6 220 aa5.01□□□□□ -1.61
TRAPPC11-207ENST00000511409 ZNF513Q8N8E2 541 aaPredicted RBP5.01□□□□□ -1.61
TRAPPC11-207ENST00000511409 AARSD1Q9BTE6 412 aaKnown RBP5.01□□□□□ -1.61
TRAPPC11-207ENST00000511409 KANSL2Q9H9L4 492 aa5.01□□□□□ -1.61
TRAPPC11-207ENST00000511409 ATP13A1Q9HD20 1204 aa5.01□□□□□ -1.61
TRAPPC11-207ENST00000511409 FANCLQ9NW38 375 aa5.01□□□□□ -1.61
TRAPPC11-207ENST00000511409 GPR55Q9Y2T6 319 aaPredicted RBP5.01□□□□□ -1.61
TRAPPC11-207ENST00000511409 PTCH2Q9Y6C5 1203 aa5.01□□□□□ -1.61
TRAPPC11-207ENST00000511409 ESYT3A0FGR9 886 aa5□□□□□ -1.61
TRAPPC11-207ENST00000511409 TBX1O43435 398 aa5□□□□□ -1.61
TRAPPC11-207ENST00000511409 FKTNO75072 461 aa5□□□□□ -1.61
TRAPPC11-207ENST00000511409 CLSTN1O94985 981 aa5□□□□□ -1.61
TRAPPC11-207ENST00000511409 SNRPB2P08579 225 aaKnown RBP5□□□□□ -1.61
TRAPPC11-207ENST00000511409 FUT4P22083 530 aa5□□□□□ -1.61
TRAPPC11-207ENST00000511409 CTSKP43235 329 aa5□□□□□ -1.61
TRAPPC11-207ENST00000511409 NOP2P46087 812 aaKnown RBP5□□□□□ -1.61
TRAPPC11-207ENST00000511409 PCBP3P57721 371 aaKnown RBP5□□□□□ -1.61
TRAPPC11-207ENST00000511409 IKZF1Q13422 519 aa5□□□□□ -1.61
TRAPPC11-207ENST00000511409 LCE4AQ5TA78 99 aa5□□□□□ -1.61
TRAPPC11-207ENST00000511409 GTF2IRD2BQ6EKJ0 949 aa5□□□□□ -1.61
TRAPPC11-207ENST00000511409 THAP5Q7Z6K1 395 aa5□□□□□ -1.61
TRAPPC11-207ENST00000511409 GTF2IRD2Q86UP8 949 aa5□□□□□ -1.61
TRAPPC11-207ENST00000511409 ZBTB38Q8NAP3 1195 aaPredicted RBP5□□□□□ -1.61
TRAPPC11-207ENST00000511409 ZSWIM2Q8NEG5 633 aa5□□□□□ -1.61
TRAPPC11-207ENST00000511409 ASB11Q8WXH4 323 aa5□□□□□ -1.61
TRAPPC11-207ENST00000511409 APPBP2Q92624 585 aa5□□□□□ -1.61
TRAPPC11-207ENST00000511409 FOXP3Q9BZS1 431 aa5□□□□□ -1.61
TRAPPC11-207ENST00000511409 ARHGEF4Q9NR80 690 aa5□□□□□ -1.61
TRAPPC11-207ENST00000511409 SEMA3GQ9NS98 782 aa5□□□□□ -1.61
TRAPPC11-207ENST00000511409 TCFL5Q9UL49 500 aa5□□□□□ -1.61
TRAPPC11-207ENST00000511409 PITPNM2Q9BZ72 1349 aa4.99□□□□□ -1.61
TRAPPC11-207ENST00000511409 STXBP3O00186 592 aa4.99□□□□□ -1.61
TRAPPC11-207ENST00000511409 PRODHO43272 600 aa4.99□□□□□ -1.61
TRAPPC11-207ENST00000511409 ADCY3O60266 1144 aa4.99□□□□□ -1.61
TRAPPC11-207ENST00000511409 CDC45O75419 566 aa4.99□□□□□ -1.61
TRAPPC11-207ENST00000511409 GSTM1P09488 218 aa4.99□□□□□ -1.61
TRAPPC11-207ENST00000511409 CD8BP10966 210 aa4.99□□□□□ -1.61
TRAPPC11-207ENST00000511409 L1CAMP32004 1257 aa4.99□□□□□ -1.61
TRAPPC11-207ENST00000511409 CD96P40200 585 aa4.99□□□□□ -1.61
TRAPPC11-207ENST00000511409 GRIA2P42262 883 aa4.99□□□□□ -1.61
TRAPPC11-207ENST00000511409 BNIP3Q12983 259 aa4.99□□□□□ -1.61
TRAPPC11-207ENST00000511409 GRB10Q13322 594 aa4.99□□□□□ -1.61
TRAPPC11-207ENST00000511409 SQSTM1Q13501 440 aa4.99□□□□□ -1.61
TRAPPC11-207ENST00000511409 YOD1Q5VVQ6 348 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC11-207ENST00000511409 NSMFQ6X4W1 530 aa4.99□□□□□ -1.61
TRAPPC11-207ENST00000511409 HOMER1Q86YM7 354 aa4.99□□□□□ -1.61
TRAPPC11-207ENST00000511409 NLGN1Q8N2Q7 840 aa4.99□□□□□ -1.61
TRAPPC11-207ENST00000511409 SYTL4Q96C24 671 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC11-207ENST00000511409 MRGPRX3Q96LB0 322 aa4.99□□□□□ -1.61
TRAPPC11-207ENST00000511409 SLC26A8Q96RN1 970 aa4.99□□□□□ -1.61
TRAPPC11-207ENST00000511409 IER2Q9BTL4 223 aa4.99□□□□□ -1.61
TRAPPC11-207ENST00000511409 LMCD1Q9NZU5 365 aa4.99□□□□□ -1.61
TRAPPC11-207ENST00000511409 PCDHA11Q9Y5I1 949 aa4.99□□□□□ -1.61
TRAPPC11-207ENST00000511409 TRBV23-1A0A0A0MS06 115 aa4.98□□□□□ -1.61
TRAPPC11-207ENST00000511409 ASMTLO95671 621 aa4.98□□□□□ -1.61
TRAPPC11-207ENST00000511409 PABPC1P11940 636 aaKnown RBP4.98□□□□□ -1.61
TRAPPC11-207ENST00000511409 VAV1P15498 845 aa4.98□□□□□ -1.61
TRAPPC11-207ENST00000511409 HOXC12P31275 282 aa4.98□□□□□ -1.61
TRAPPC11-207ENST00000511409 BMP8BP34820 402 aa4.98□□□□□ -1.61
TRAPPC11-207ENST00000511409 ECI1P42126 302 aa4.98□□□□□ -1.61
TRAPPC11-207ENST00000511409 EGR3Q06889 387 aa4.98□□□□□ -1.61
TRAPPC11-207ENST00000511409 SCRN1Q12765 414 aa4.98□□□□□ -1.61
TRAPPC11-207ENST00000511409 SF1Q15637 639 aaKnown RBP4.98□□□□□ -1.61
TRAPPC11-207ENST00000511409 LONRF2Q1L5Z9 754 aa4.98□□□□□ -1.61
TRAPPC11-207ENST00000511409 TMEM67Q5HYA8 995 aa4.98□□□□□ -1.61
TRAPPC11-207ENST00000511409 FAM209AQ5JX71 171 aa4.98□□□□□ -1.61
TRAPPC11-207ENST00000511409 ANGEL2Q5VTE6 544 aaKnown RBP4.98□□□□□ -1.61
TRAPPC11-207ENST00000511409 FOXB2Q5VYV0 432 aa4.98□□□□□ -1.61
TRAPPC11-207ENST00000511409 TMPRSS7Q7RTY8 843 aa4.98□□□□□ -1.61
TRAPPC11-207ENST00000511409 FAM177A1Q8N128 213 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC11-207ENST00000511409 USHBP1Q8N6Y0 703 aa4.98□□□□□ -1.61
TRAPPC11-207ENST00000511409 CDADC1Q9BWV3 514 aa4.98□□□□□ -1.61
TRAPPC11-207ENST00000511409 KRTAP4-11Q9BYQ6 195 aa4.98□□□□□ -1.61
TRAPPC11-207ENST00000511409 CADPSQ9ULU8 1353 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms