RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 IQGAP3Q86VI3 1631 aa8.29□□□□□ -1.08
GYPB-212ENST00000511198 PARP4Q9UKK3 1724 aaKnown RBP8.29□□□□□ -1.08
GYPB-212ENST00000511198 TMEM265A0A087WTH1 108 aa8.29□□□□□ -1.08
GYPB-212ENST00000511198 ITIH2P19823 946 aa8.29□□□□□ -1.08
GYPB-212ENST00000511198 CD96P40200 585 aa8.29□□□□□ -1.08
GYPB-212ENST00000511198 LBX1P52954 281 aa8.29□□□□□ -1.08
GYPB-212ENST00000511198 AOC3Q16853 763 aa8.29□□□□□ -1.08
GYPB-212ENST00000511198 NKPD1Q17RQ9 610 aa8.29□□□□□ -1.08
GYPB-212ENST00000511198 HID1Q8IV36 788 aa8.29□□□□□ -1.08
GYPB-212ENST00000511198 SPACA3Q8IXA5 215 aa8.29□□□□□ -1.08
GYPB-212ENST00000511198 C16orf71Q8IYS4 520 aaPredicted RBP8.29□□□□□ -1.08
GYPB-212ENST00000511198 SNX11Q9Y5W9 270 aa8.29□□□□□ -1.08
GYPB-212ENST00000511198 RGPD8O14715 1765 aaPredicted RBP8.29□□□□□ -1.08
GYPB-212ENST00000511198 KIAA0232Q92628 1395 aa8.28□□□□□ -1.08
GYPB-212ENST00000511198 PAX4O43316 350 aa8.28□□□□□ -1.08
GYPB-212ENST00000511198 CTCFP49711 727 aaPredicted RBP8.28□□□□□ -1.08
GYPB-212ENST00000511198 RPL6Q02878 288 aaKnown RBP8.28□□□□□ -1.08
GYPB-212ENST00000511198 TSNAXIP1Q2TAA8 658 aa8.28□□□□□ -1.08
GYPB-212ENST00000511198 WAPLQ7Z5K2 1190 aa8.28□□□□□ -1.08
GYPB-212ENST00000511198 MFSD2AQ8NA29 543 aa8.28□□□□□ -1.08
GYPB-212ENST00000511198 RIN3Q8TB24 985 aa8.28□□□□□ -1.08
GYPB-212ENST00000511198 HRASLS5Q96KN8 279 aa8.28□□□□□ -1.08
GYPB-212ENST00000511198 FMNL2Q96PY5 1086 aa8.28□□□□□ -1.08
GYPB-212ENST00000511198 CRYBG1Q9Y4K1 1723 aa8.28□□□□□ -1.08
GYPB-212ENST00000511198 SSH2Q76I76 1423 aa8.28□□□□□ -1.08
GYPB-212ENST00000511198 PNPLA7Q6ZV29 1317 aa8.28□□□□□ -1.08
GYPB-212ENST00000511198 FMN2Q9NZ56 1722 aa8.27□□□□□ -1.09
GYPB-212ENST00000511198 F6X3S4 739 aa8.27□□□□□ -1.09
GYPB-212ENST00000511198 CST3P01034 146 aaPredicted RBP8.27□□□□□ -1.09
GYPB-212ENST00000511198 FUT4P22083 530 aa8.27□□□□□ -1.09
GYPB-212ENST00000511198 EVA1CP58658 441 aa8.27□□□□□ -1.09
GYPB-212ENST00000511198 PLCL1Q15111 1095 aa8.27□□□□□ -1.09
GYPB-212ENST00000511198 MARCH10Q8NA82 808 aaPredicted RBP8.27□□□□□ -1.09
GYPB-212ENST00000511198 JARID2Q92833 1246 aaPredicted RBP8.27□□□□□ -1.09
GYPB-212ENST00000511198 PRDM5Q9NQX1 630 aaPredicted RBP8.27□□□□□ -1.09
GYPB-212ENST00000511198 VTI1BQ9UEU0 232 aa8.27□□□□□ -1.09
GYPB-212ENST00000511198 MAPK8IP1Q9UQF2 711 aa8.27□□□□□ -1.09
GYPB-212ENST00000511198 RBAK-RBAKDNI3L0D1 243 aa8.26□□□□□ -1.09
GYPB-212ENST00000511198 ITGB5P18084 799 aa8.26□□□□□ -1.09
GYPB-212ENST00000511198 ZNF792Q3KQV3 632 aa8.26□□□□□ -1.09
GYPB-212ENST00000511198 ZNF326Q5BKZ1 582 aaKnown RBP8.26□□□□□ -1.09
GYPB-212ENST00000511198 PRAMEF13Q5VWM6 474 aa8.26□□□□□ -1.09
GYPB-212ENST00000511198 CCDC84Q86UT8 332 aaPredicted RBP8.26□□□□□ -1.09
GYPB-212ENST00000511198 MIPEPQ99797 713 aa8.26□□□□□ -1.09
GYPB-212ENST00000511198 KRTAP4-12Q9BQ66 201 aa8.26□□□□□ -1.09
GYPB-212ENST00000511198 MRS2Q9HD23 443 aa8.26□□□□□ -1.09
GYPB-212ENST00000511198 TJP2Q9UDY2 1190 aa8.26□□□□□ -1.09
GYPB-212ENST00000511198 CD2APQ9Y5K6 639 aa8.26□□□□□ -1.09
GYPB-212ENST00000511198 NRXN1Q9ULB1 1477 aa8.26□□□□□ -1.09
GYPB-212ENST00000511198 ALS2Q96Q42 1657 aa8.25□□□□□ -1.09
GYPB-212ENST00000511198 FAM221AA4D161 298 aa8.25□□□□□ -1.09
GYPB-212ENST00000511198 PF4P02776 101 aa8.25□□□□□ -1.09
GYPB-212ENST00000511198 LMNB2Q03252 620 aa8.25□□□□□ -1.09
GYPB-212ENST00000511198 CAMK2GQ13555 558 aaPredicted RBP8.25□□□□□ -1.09
GYPB-212ENST00000511198 LETMD1Q6P1Q0 360 aa8.25□□□□□ -1.09
GYPB-212ENST00000511198 MRPL41Q8IXM3 137 aaKnown RBP8.25□□□□□ -1.09
GYPB-212ENST00000511198 SMC1BQ8NDV3 1235 aa8.25□□□□□ -1.09
GYPB-212ENST00000511198 RHOVQ96L33 236 aa8.25□□□□□ -1.09
GYPB-212ENST00000511198 RSRP1Q9BUV0 290 aa8.25□□□□□ -1.09
GYPB-212ENST00000511198 ADAMTS6Q9UKP5 1117 aa8.25□□□□□ -1.09
GYPB-212ENST00000511198 THRAP3Q9Y2W1 955 aaKnown RBP8.25□□□□□ -1.09
GYPB-212ENST00000511198 TRPM3Q9HCF6 1732 aaPredicted RBP8.25□□□□□ -1.09
GYPB-212ENST00000511198 PRR33A8MZF0 331 aa8.24□□□□□ -1.09
GYPB-212ENST00000511198 CILPO75339 1184 aa8.24□□□□□ -1.09
GYPB-212ENST00000511198 PGRP06401 933 aa8.24□□□□□ -1.09
GYPB-212ENST00000511198 ZC3H6P61129 1189 aaKnown RBP8.24□□□□□ -1.09
GYPB-212ENST00000511198 BNC2Q6ZN30 1099 aaPredicted RBP8.24□□□□□ -1.09
GYPB-212ENST00000511198 C22orf34Q6ZV56 151 aa8.24□□□□□ -1.09
GYPB-212ENST00000511198 MBNL3Q9NUK0 354 aaKnown RBP8.24□□□□□ -1.09
GYPB-212ENST00000511198 A0A0C4DFX4 3053 aa8.24□□□□□ -1.09
GYPB-212ENST00000511198 E9PCH4 1651 aa8.24□□□□□ -1.09
GYPB-212ENST00000511198 BCL9O00512 1426 aa8.23□□□□□ -1.09
GYPB-212ENST00000511198 MYOM3Q5VTT5 1437 aa8.23□□□□□ -1.09
GYPB-212ENST00000511198 CICQ96RK0 1608 aaPredicted RBP8.23□□□□□ -1.09
GYPB-212ENST00000511198 GNAT3A8MTJ3 354 aa8.23□□□□□ -1.09
GYPB-212ENST00000511198 RNASE1P07998 156 aaKnown RBP8.23□□□□□ -1.09
GYPB-212ENST00000511198 ZNF865P0CJ78 1059 aaPredicted RBP8.23□□□□□ -1.09
GYPB-212ENST00000511198 HSPA8P11142 646 aaKnown RBP8.23□□□□□ -1.09
GYPB-212ENST00000511198 XAGE3Q8WTP9 111 aa8.23□□□□□ -1.09
GYPB-212ENST00000511198 ACSF2Q96CM8 615 aaPredicted RBP8.23□□□□□ -1.09
GYPB-212ENST00000511198 TMEM87BQ96K49 555 aa8.23□□□□□ -1.09
GYPB-212ENST00000511198 TMEM74Q96NL1 305 aa8.23□□□□□ -1.09
GYPB-212ENST00000511198 BCL2L13Q9BXK5 485 aa8.23□□□□□ -1.09
GYPB-212ENST00000511198 TPX2Q9ULW0 747 aaKnown RBP8.23□□□□□ -1.09
GYPB-212ENST00000511198 RNF114Q9Y508 228 aa8.23□□□□□ -1.09
GYPB-212ENST00000511198 CORINQ9Y5Q5 1042 aa8.23□□□□□ -1.09
GYPB-212ENST00000511198 QSER1Q2KHR3 1735 aa8.23□□□□□ -1.09
GYPB-212ENST00000511198 PLEKHH1Q9ULM0 1364 aa8.22□□□□□ -1.09
GYPB-212ENST00000511198 LRRC37A3O60309 1634 aa8.22□□□□□ -1.09
GYPB-212ENST00000511198 F13A1P00488 732 aa8.22□□□□□ -1.09
GYPB-212ENST00000511198 CLCN7P51798 805 aa8.22□□□□□ -1.09
GYPB-212ENST00000511198 DDB1Q16531 1140 aa8.22□□□□□ -1.09
GYPB-212ENST00000511198 SFRP5Q5T4F7 317 aa8.22□□□□□ -1.09
GYPB-212ENST00000511198 SLC6A19Q695T7 634 aa8.22□□□□□ -1.09
GYPB-212ENST00000511198 MCATQ8IVS2 390 aaKnown RBP8.22□□□□□ -1.09
GYPB-212ENST00000511198 ASB11Q8WXH4 323 aa8.22□□□□□ -1.09
GYPB-212ENST00000511198 GATAD2BQ8WXI9 593 aa8.22□□□□□ -1.09
GYPB-212ENST00000511198 DPH2Q9BQC3 489 aaPredicted RBP8.22□□□□□ -1.09
GYPB-212ENST00000511198 ADAM30Q9UKF2 790 aa8.22□□□□□ -1.09
GYPB-212ENST00000511198 IGSF1Q8N6C5 1336 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms