RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, humanhuman

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-223ENST00000511081 SZT2Q5T011 3432 aa14.32□□□□□ -0.12
CLDND1-223ENST00000511081 GABBR2O75899 941 aa14.32□□□□□ -0.12
CLDND1-223ENST00000511081 CNGA1P29973 690 aa14.32□□□□□ -0.12
CLDND1-223ENST00000511081 PRAMEF19Q5SWL8 479 aa14.32□□□□□ -0.12
CLDND1-223ENST00000511081 ANKS1AQ92625 1134 aa14.32□□□□□ -0.12
CLDND1-223ENST00000511081 IL25Q9H293 177 aa14.32□□□□□ -0.12
CLDND1-223ENST00000511081 PRR12Q9ULL5 1215 aa14.32□□□□□ -0.12
CLDND1-223ENST00000511081 DNM1LO00429 736 aa14.31□□□□□ -0.12
CLDND1-223ENST00000511081 ZNF865P0CJ78 1059 aaPredicted RBP14.31□□□□□ -0.12
CLDND1-223ENST00000511081 SNHG28P0DPA3 235 aa14.31□□□□□ -0.12
CLDND1-223ENST00000511081 TKFCQ3LXA3 575 aa14.31□□□□□ -0.12
CLDND1-223ENST00000511081 RRP12Q5JTH9 1297 aaKnown RBP14.31□□□□□ -0.12
CLDND1-223ENST00000511081 KCTD1Q719H9 257 aa14.31□□□□□ -0.12
CLDND1-223ENST00000511081 DGKHQ86XP1 1220 aa14.31□□□□□ -0.12
CLDND1-223ENST00000511081 ARRDC4Q8NCT1 418 aa14.31□□□□□ -0.12
CLDND1-223ENST00000511081 ESR2Q92731 530 aa14.31□□□□□ -0.12
CLDND1-223ENST00000511081 DDX11Q96FC9 970 aa14.31□□□□□ -0.12
CLDND1-223ENST00000511081 FGD4Q96M96 766 aa14.31□□□□□ -0.12
CLDND1-223ENST00000511081 TOMM22Q9NS69 142 aa14.31□□□□□ -0.12
CLDND1-223ENST00000511081 CTDP1Q9Y5B0 961 aaPredicted RBP14.31□□□□□ -0.12
CLDND1-223ENST00000511081 LAMA3Q16787 3333 aa14.3□□□□□ -0.12
CLDND1-223ENST00000511081 SNAI1O95863 264 aaPredicted RBP14.3□□□□□ -0.12
CLDND1-223ENST00000511081 CHMLP26374 656 aa14.3□□□□□ -0.12
CLDND1-223ENST00000511081 AGBL1Q96MI9 1066 aa14.3□□□□□ -0.12
CLDND1-223ENST00000511081 CTNNA3Q9UI47 895 aa14.3□□□□□ -0.12
CLDND1-223ENST00000511081 SYNGAP1Q96PV0 1343 aa14.3□□□□□ -0.12
CLDND1-223ENST00000511081 LAMA4Q16363 1823 aa14.29□□□□□ -0.12
CLDND1-223ENST00000511081 PDHBP11177 359 aa14.29□□□□□ -0.12
CLDND1-223ENST00000511081 TAL1P17542 331 aaPredicted RBP14.29□□□□□ -0.12
CLDND1-223ENST00000511081 CCDC178Q5BJE1 867 aa14.29□□□□□ -0.12
CLDND1-223ENST00000511081 TTBK2Q6IQ55 1244 aa14.29□□□□□ -0.12
CLDND1-223ENST00000511081 RASGRP2Q7LDG7 609 aa14.29□□□□□ -0.12
CLDND1-223ENST00000511081 FAM133AQ8N9E0 248 aa14.29□□□□□ -0.12
CLDND1-223ENST00000511081 GDF15Q99988 308 aa14.29□□□□□ -0.12
CLDND1-223ENST00000511081 RANBP17Q9H2T7 1088 aaKnown RBP14.29□□□□□ -0.12
CLDND1-223ENST00000511081 ZSWIM5Q9P217 1185 aa14.29□□□□□ -0.12
CLDND1-223ENST00000511081 NEDD4P46934 1319 aa14.29□□□□□ -0.12
CLDND1-223ENST00000511081 ICAM1P05362 532 aa14.28□□□□□ -0.12
CLDND1-223ENST00000511081 LAMA2P24043 3122 aaKnown RBP14.28□□□□□ -0.12
CLDND1-223ENST00000511081 BMP8BP34820 402 aa14.28□□□□□ -0.12
CLDND1-223ENST00000511081 ZNF543Q08ER8 600 aa14.28□□□□□ -0.12
CLDND1-223ENST00000511081 LRRC41Q15345 812 aa14.28□□□□□ -0.12
CLDND1-223ENST00000511081 IMMTQ16891 758 aaKnown RBP14.28□□□□□ -0.12
CLDND1-223ENST00000511081 LRRC26Q2I0M4 334 aa14.28□□□□□ -0.12
CLDND1-223ENST00000511081 ANKRD35Q8N283 1001 aa14.28□□□□□ -0.12
CLDND1-223ENST00000511081 RAD50Q92878 1312 aa14.28□□□□□ -0.12
CLDND1-223ENST00000511081 ACAD9Q9H845 621 aa14.28□□□□□ -0.12
CLDND1-223ENST00000511081 RBM27Q9P2N5 1060 aaKnown RBP14.28□□□□□ -0.12
CLDND1-223ENST00000511081 KDM4AO75164 1064 aa14.27□□□□□ -0.13
CLDND1-223ENST00000511081 SLC16A2P36021 539 aa14.27□□□□□ -0.13
CLDND1-223ENST00000511081 SLC4A3P48751 1232 aa14.27□□□□□ -0.13
CLDND1-223ENST00000511081 FXR1P51114 621 aaKnown RBP eCLIP14.27□□□□□ -0.13
CLDND1-223ENST00000511081 IKQ13123 557 aaPredicted RBP14.27□□□□□ -0.13
CLDND1-223ENST00000511081 GJC2Q5T442 439 aaPredicted RBP14.27□□□□□ -0.13
CLDND1-223ENST00000511081 SYDE2Q5VT97 1194 aa14.27□□□□□ -0.13
CLDND1-223ENST00000511081 IQCA1Q86XH1 822 aa14.27□□□□□ -0.13
CLDND1-223ENST00000511081 RUFY2Q8WXA3 655 aa14.27□□□□□ -0.13
CLDND1-223ENST00000511081 CHMP4CQ96CF2 233 aa14.27□□□□□ -0.13
CLDND1-223ENST00000511081 TRERF1Q96PN7 1200 aa14.27□□□□□ -0.13
CLDND1-223ENST00000511081 SENP6Q9GZR1 1112 aaPredicted RBP14.27□□□□□ -0.13
CLDND1-223ENST00000511081 KATNBL1Q9H079 304 aa14.27□□□□□ -0.13
CLDND1-223ENST00000511081 ABHD16BQ9H3Z7 469 aa14.27□□□□□ -0.13
CLDND1-223ENST00000511081 A1CFQ9NQ94 594 aaKnown RBP14.27□□□□□ -0.13
CLDND1-223ENST00000511081 RNF146Q9NTX7 359 aa14.27□□□□□ -0.13
CLDND1-223ENST00000511081 CNPY2Q9Y2B0 182 aa14.27□□□□□ -0.13
CLDND1-223ENST00000511081 A0A1W2PPC1 479 aa14.26□□□□□ -0.13
CLDND1-223ENST00000511081 SOWAHBA6NEL2 793 aa14.26□□□□□ -0.13
CLDND1-223ENST00000511081 B4E1Z4 1266 aa14.26□□□□□ -0.13
CLDND1-223ENST00000511081 SGSM2O43147 1006 aa14.26□□□□□ -0.13
CLDND1-223ENST00000511081 AKR1A1P14550 325 aa14.26□□□□□ -0.13
CLDND1-223ENST00000511081 SNAP25P60880 206 aa14.26□□□□□ -0.13
CLDND1-223ENST00000511081 CNTN2Q02246 1040 aa14.26□□□□□ -0.13
CLDND1-223ENST00000511081 ACVR2BQ13705 512 aa14.26□□□□□ -0.13
CLDND1-223ENST00000511081 MUM1L1Q5H9M0 696 aa14.26□□□□□ -0.13
CLDND1-223ENST00000511081 GPATCH4Q5T3I0 446 aaKnown RBP14.26□□□□□ -0.13
CLDND1-223ENST00000511081 C1orf53Q5VUE5 145 aa14.26□□□□□ -0.13
CLDND1-223ENST00000511081 ANO1Q5XXA6 986 aa14.26□□□□□ -0.13
CLDND1-223ENST00000511081 C7orf61Q8IZ16 206 aa14.26□□□□□ -0.13
CLDND1-223ENST00000511081 ZSCAN10Q96SZ4 725 aaPredicted RBP14.26□□□□□ -0.13
CLDND1-223ENST00000511081 ZKSCAN3Q9BRR0 538 aa14.26□□□□□ -0.13
CLDND1-223ENST00000511081 KRT23Q9C075 422 aa14.26□□□□□ -0.13
CLDND1-223ENST00000511081 CNNM2Q9H8M5 875 aa14.26□□□□□ -0.13
CLDND1-223ENST00000511081 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.26□□□□□ -0.13
CLDND1-223ENST00000511081 FAM184BQ9ULE4 1060 aa14.26□□□□□ -0.13
CLDND1-223ENST00000511081 POTEB2H3BUK9 544 aa14.25□□□□□ -0.13
CLDND1-223ENST00000511081 ADAMTS4O75173 837 aa14.25□□□□□ -0.13
CLDND1-223ENST00000511081 DUSP11O75319 330 aaKnown RBP14.25□□□□□ -0.13
CLDND1-223ENST00000511081 RARBP10826 455 aa14.25□□□□□ -0.13
CLDND1-223ENST00000511081 ALAS1P13196 640 aa14.25□□□□□ -0.13
CLDND1-223ENST00000511081 PTH1RQ03431 593 aa14.25□□□□□ -0.13
CLDND1-223ENST00000511081 SNX17Q15036 470 aa14.25□□□□□ -0.13
CLDND1-223ENST00000511081 CCDC96Q2M329 555 aa14.25□□□□□ -0.13
CLDND1-223ENST00000511081 CCDC174Q6PII3 467 aa14.25□□□□□ -0.13
CLDND1-223ENST00000511081 SLC39A5Q6ZMH5 540 aa14.25□□□□□ -0.13
CLDND1-223ENST00000511081 ENAHQ8N8S7 591 aaPredicted RBP14.25□□□□□ -0.13
CLDND1-223ENST00000511081 KLHDC9Q8NEP7 349 aa14.25□□□□□ -0.13
CLDND1-223ENST00000511081 MAP4K1Q92918 833 aa14.25□□□□□ -0.13
CLDND1-223ENST00000511081 GPCPD1Q9NPB8 672 aa14.25□□□□□ -0.13
CLDND1-223ENST00000511081 XPNPEP3Q9NQH7 507 aa14.25□□□□□ -0.13
CLDND1-223ENST00000511081 HOMER2Q9NSB8 354 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms