RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 BMP8BP34820 402 aa8.04□□□□□ -1.12
CHD1-206ENST00000511067 GFRA1P56159 465 aa8.04□□□□□ -1.12
CHD1-206ENST00000511067 TSPYL5Q86VY4 417 aaPredicted RBP8.04□□□□□ -1.12
CHD1-206ENST00000511067 SPACA3Q8IXA5 215 aa8.04□□□□□ -1.12
CHD1-206ENST00000511067 BRINP2Q9C0B6 783 aa8.04□□□□□ -1.12
CHD1-206ENST00000511067 CD2APQ9Y5K6 639 aa8.04□□□□□ -1.12
CHD1-206ENST00000511067 SNX11Q9Y5W9 270 aa8.04□□□□□ -1.12
CHD1-206ENST00000511067 HSP90B1P14625 803 aaKnown RBP8.03□□□□□ -1.12
CHD1-206ENST00000511067 CTSKP43235 329 aa8.03□□□□□ -1.12
CHD1-206ENST00000511067 NOP2P46087 812 aaKnown RBP8.03□□□□□ -1.12
CHD1-206ENST00000511067 DALRD3Q5D0E6 543 aaKnown RBP8.03□□□□□ -1.12
CHD1-206ENST00000511067 ARTNQ5T4W7 220 aa8.03□□□□□ -1.12
CHD1-206ENST00000511067 TCTN2Q96GX1 697 aa8.03□□□□□ -1.12
CHD1-206ENST00000511067 SPC25Q9HBM1 224 aa8.03□□□□□ -1.12
CHD1-206ENST00000511067 ZFP64Q9NPA5 681 aa8.03□□□□□ -1.12
CHD1-206ENST00000511067 KCNQ2O43526 872 aa8.02□□□□□ -1.13
CHD1-206ENST00000511067 DLX3O60479 287 aa8.02□□□□□ -1.13
CHD1-206ENST00000511067 DNAJC6O75061 913 aa8.02□□□□□ -1.13
CHD1-206ENST00000511067 SNRPB2P08579 225 aaKnown RBP8.02□□□□□ -1.13
CHD1-206ENST00000511067 IFI16Q16666 785 aaKnown RBP8.02□□□□□ -1.13
CHD1-206ENST00000511067 GAB4Q2WGN9 574 aa8.02□□□□□ -1.13
CHD1-206ENST00000511067 TRIM61Q5EBN2 209 aa8.02□□□□□ -1.13
CHD1-206ENST00000511067 CRTC3Q6UUV7 619 aa8.02□□□□□ -1.13
CHD1-206ENST00000511067 ZDHHC13Q8IUH4 622 aa8.02□□□□□ -1.13
CHD1-206ENST00000511067 FAM181AQ8N9Y4 354 aa8.02□□□□□ -1.13
CHD1-206ENST00000511067 ZCRB1Q8TBF4 217 aaKnown RBP8.02□□□□□ -1.13
CHD1-206ENST00000511067 NINJ1Q92982 152 aa8.02□□□□□ -1.13
CHD1-206ENST00000511067 PIM2Q9P1W9 311 aa8.02□□□□□ -1.13
CHD1-206ENST00000511067 RNF112Q9ULX5 631 aa8.02□□□□□ -1.13
CHD1-206ENST00000511067 GPR55Q9Y2T6 319 aaPredicted RBP8.02□□□□□ -1.13
CHD1-206ENST00000511067 U3KQE9 123 aa8.02□□□□□ -1.13
CHD1-206ENST00000511067 TMEM265A0A087WTH1 108 aa8.01□□□□□ -1.13
CHD1-206ENST00000511067 MEIS1O00470 390 aa8.01□□□□□ -1.13
CHD1-206ENST00000511067 AURKAO14965 403 aa8.01□□□□□ -1.13
CHD1-206ENST00000511067 CYP26A1O43174 497 aa8.01□□□□□ -1.13
CHD1-206ENST00000511067 ENDOUP21128 410 aaKnown RBP8.01□□□□□ -1.13
CHD1-206ENST00000511067 PABPC4Q13310 644 aaKnown RBP eCLIP8.01□□□□□ -1.13
CHD1-206ENST00000511067 SLC35F1Q5T1Q4 408 aa8.01□□□□□ -1.13
CHD1-206ENST00000511067 TMPRSS7Q7RTY8 843 aa8.01□□□□□ -1.13
CHD1-206ENST00000511067 FILIP1Q7Z7B0 1213 aa8.01□□□□□ -1.13
CHD1-206ENST00000511067 ANKRD13AQ8IZ07 590 aa8.01□□□□□ -1.13
CHD1-206ENST00000511067 NETO1Q8TDF5 533 aa8.01□□□□□ -1.13
CHD1-206ENST00000511067 MFSD3Q96ES6 412 aa8.01□□□□□ -1.13
CHD1-206ENST00000511067 C1orf159Q96HA4 380 aa8.01□□□□□ -1.13
CHD1-206ENST00000511067 LRRC4CQ9HCJ2 640 aa8.01□□□□□ -1.13
CHD1-206ENST00000511067 MINPP1Q9UNW1 487 aa8.01□□□□□ -1.13
CHD1-206ENST00000511067 PLAGL2Q9UPG8 496 aa8.01□□□□□ -1.13
CHD1-206ENST00000511067 RBAK-RBAKDNI3L0D1 243 aa8□□□□□ -1.13
CHD1-206ENST00000511067 EFCAB14O75071 495 aa8□□□□□ -1.13
CHD1-206ENST00000511067 VAMP4O75379 141 aa8□□□□□ -1.13
CHD1-206ENST00000511067 ZNF205O95201 554 aa8□□□□□ -1.13
CHD1-206ENST00000511067 CD3EP07766 207 aa8□□□□□ -1.13
CHD1-206ENST00000511067 C6orf222P0C671 652 aaPredicted RBP8□□□□□ -1.13
CHD1-206ENST00000511067 FOSL1P15407 271 aa8□□□□□ -1.13
CHD1-206ENST00000511067 TPP2P29144 1249 aaPredicted RBP8□□□□□ -1.13
CHD1-206ENST00000511067 KCNJ6P48051 423 aa8□□□□□ -1.13
CHD1-206ENST00000511067 PCBP3P57721 371 aaKnown RBP8□□□□□ -1.13
CHD1-206ENST00000511067 GABREP78334 506 aa8□□□□□ -1.13
CHD1-206ENST00000511067 LRP8Q14114 963 aa8□□□□□ -1.13
CHD1-206ENST00000511067 PTPROQ16827 1216 aa8□□□□□ -1.13
CHD1-206ENST00000511067 CDKAL1Q5VV42 579 aa8□□□□□ -1.13
CHD1-206ENST00000511067 NBPF11Q86T75 865 aa8□□□□□ -1.13
CHD1-206ENST00000511067 NIM1KQ8IY84 436 aa8□□□□□ -1.13
CHD1-206ENST00000511067 TMEM145Q8NBT3 493 aa8□□□□□ -1.13
CHD1-206ENST00000511067 LINC00116Q8NCU8 138 aa8□□□□□ -1.13
CHD1-206ENST00000511067 COPS5Q92905 334 aa8□□□□□ -1.13
CHD1-206ENST00000511067 HSPA12BQ96MM6 686 aa8□□□□□ -1.13
CHD1-206ENST00000511067 SFMBT1Q9UHJ3 866 aa8□□□□□ -1.13
CHD1-206ENST00000511067 BACE2Q9Y5Z0 518 aa8□□□□□ -1.13
CHD1-206ENST00000511067 VAV1P15498 845 aa7.99□□□□□ -1.13
CHD1-206ENST00000511067 MASP1P48740 699 aa7.99□□□□□ -1.13
CHD1-206ENST00000511067 SCRN1Q12765 414 aa7.99□□□□□ -1.13
CHD1-206ENST00000511067 TESK1Q15569 626 aa7.99□□□□□ -1.13
CHD1-206ENST00000511067 SF1Q15637 639 aaKnown RBP7.99□□□□□ -1.13
CHD1-206ENST00000511067 DPY19L1Q2PZI1 675 aa7.99□□□□□ -1.13
CHD1-206ENST00000511067 TM4SF20Q53R12 229 aa7.99□□□□□ -1.13
CHD1-206ENST00000511067 ACBD5Q5T8D3 534 aaPredicted RBP7.99□□□□□ -1.13
CHD1-206ENST00000511067 RCSD1Q6JBY9 416 aa7.99□□□□□ -1.13
CHD1-206ENST00000511067 RNF111Q6ZNA4 994 aa7.99□□□□□ -1.13
CHD1-206ENST00000511067 MAMDC2Q7Z304 686 aaPredicted RBP7.99□□□□□ -1.13
CHD1-206ENST00000511067 SLC12A9Q9BXP2 914 aa7.99□□□□□ -1.13
CHD1-206ENST00000511067 SEMA3GQ9NS98 782 aa7.99□□□□□ -1.13
CHD1-206ENST00000511067 INTS7Q9NVH2 962 aaKnown RBP7.99□□□□□ -1.13
CHD1-206ENST00000511067 IFT57Q9NWB7 429 aa7.99□□□□□ -1.13
CHD1-206ENST00000511067 PITPNM2Q9BZ72 1349 aa7.99□□□□□ -1.13
CHD1-206ENST00000511067 PRR19A6NJB7 356 aa7.98□□□□□ -1.13
CHD1-206ENST00000511067 H3BS24 57 aa7.98□□□□□ -1.13
CHD1-206ENST00000511067 STXBP3O00186 592 aa7.98□□□□□ -1.13
CHD1-206ENST00000511067 RAPGEF3O95398 923 aa7.98□□□□□ -1.13
CHD1-206ENST00000511067 VIL1P09327 827 aaKnown RBP7.98□□□□□ -1.13
CHD1-206ENST00000511067 IBSPP21815 317 aaPredicted RBP7.98□□□□□ -1.13
CHD1-206ENST00000511067 CYP4F3Q08477 520 aa7.98□□□□□ -1.13
CHD1-206ENST00000511067 CBX2Q14781 532 aaPredicted RBP7.98□□□□□ -1.13
CHD1-206ENST00000511067 EEF1DP3Q658K8 133 aa7.98□□□□□ -1.13
CHD1-206ENST00000511067 PLD6Q8N2A8 252 aaKnown RBP7.98□□□□□ -1.13
CHD1-206ENST00000511067 USHBP1Q8N6Y0 703 aa7.98□□□□□ -1.13
CHD1-206ENST00000511067 KREMEN2Q8NCW0 462 aa7.98□□□□□ -1.13
CHD1-206ENST00000511067 GSTCDQ8NEC7 633 aa7.98□□□□□ -1.13
CHD1-206ENST00000511067 PTPRN2Q92932 1015 aa7.98□□□□□ -1.13
CHD1-206ENST00000511067 UBE2FQ969M7 185 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms