RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 STAG1Q8WVM7 1258 aa9.91□□□□□ -0.82
TRIO-217ENST00000511019 LENG1Q96BZ8 264 aaPredicted RBP9.91□□□□□ -0.82
TRIO-217ENST00000511019 RNPC3Q96LT9 517 aaKnown RBP9.91□□□□□ -0.82
TRIO-217ENST00000511019 SEC62Q99442 399 aaKnown RBP9.91□□□□□ -0.82
TRIO-217ENST00000511019 FSD1Q9BTV5 496 aa9.91□□□□□ -0.82
TRIO-217ENST00000511019 NAPBQ9H115 298 aa9.91□□□□□ -0.82
TRIO-217ENST00000511019 A0A0G2JMZ2 1700 aa9.9□□□□□ -0.82
TRIO-217ENST00000511019 MROH7Q68CQ1 1323 aa9.9□□□□□ -0.82
TRIO-217ENST00000511019 TIMP1P01033 207 aa9.9□□□□□ -0.82
TRIO-217ENST00000511019 ASGR1P07306 291 aa9.9□□□□□ -0.82
TRIO-217ENST00000511019 MCCP23508 829 aa9.9□□□□□ -0.82
TRIO-217ENST00000511019 CST5P28325 142 aaPredicted RBP9.9□□□□□ -0.82
TRIO-217ENST00000511019 SLC1A4P43007 532 aa9.9□□□□□ -0.82
TRIO-217ENST00000511019 CDK7P50613 346 aa9.9□□□□□ -0.82
TRIO-217ENST00000511019 STAT2P52630 851 aa9.9□□□□□ -0.82
TRIO-217ENST00000511019 GJA9P57773 515 aa9.9□□□□□ -0.82
TRIO-217ENST00000511019 PPARAQ07869 468 aa9.9□□□□□ -0.82
TRIO-217ENST00000511019 RCSD1Q6JBY9 416 aa9.9□□□□□ -0.82
TRIO-217ENST00000511019 NOL8Q76FK4 1167 aaKnown RBP9.9□□□□□ -0.82
TRIO-217ENST00000511019 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.9□□□□□ -0.82
TRIO-217ENST00000511019 FAM160B2Q86V87 743 aa9.9□□□□□ -0.82
TRIO-217ENST00000511019 COL25A1Q9BXS0 654 aaPredicted RBP9.9□□□□□ -0.82
TRIO-217ENST00000511019 ZBTB47Q9UFB7 747 aaPredicted RBP9.9□□□□□ -0.82
TRIO-217ENST00000511019 BAZ2AQ9UIF9 1905 aaKnown RBP9.9□□□□□ -0.83
TRIO-217ENST00000511019 FRMPD3Q5JV73 1810 aa9.89□□□□□ -0.83
TRIO-217ENST00000511019 MYADML2A6NDP7 307 aa9.89□□□□□ -0.83
TRIO-217ENST00000511019 ASB14A6NK59 587 aa9.89□□□□□ -0.83
TRIO-217ENST00000511019 TSPY2A6NKD2 308 aa9.89□□□□□ -0.83
TRIO-217ENST00000511019 ARVCFO00192 962 aa9.89□□□□□ -0.83
TRIO-217ENST00000511019 TLR3O15455 904 aaKnown RBP9.89□□□□□ -0.83
TRIO-217ENST00000511019 IRX5P78411 483 aaPredicted RBP9.89□□□□□ -0.83
TRIO-217ENST00000511019 CNTN2Q02246 1040 aa9.89□□□□□ -0.83
TRIO-217ENST00000511019 TNFAIP2Q03169 654 aa9.89□□□□□ -0.83
TRIO-217ENST00000511019 TKFCQ3LXA3 575 aa9.89□□□□□ -0.83
TRIO-217ENST00000511019 ZMYM1Q5SVZ6 1142 aa9.89□□□□□ -0.83
TRIO-217ENST00000511019 MFSD5Q6N075 450 aa9.89□□□□□ -0.83
TRIO-217ENST00000511019 CCDC174Q6PII3 467 aa9.89□□□□□ -0.83
TRIO-217ENST00000511019 ARMCX2Q7L311 632 aa9.89□□□□□ -0.83
TRIO-217ENST00000511019 CCDC144CPQ8IYA2 1237 aa9.89□□□□□ -0.83
TRIO-217ENST00000511019 TMEM199Q8N511 208 aa9.89□□□□□ -0.83
TRIO-217ENST00000511019 MAFAQ8NHW3 353 aaPredicted RBP9.89□□□□□ -0.83
TRIO-217ENST00000511019 PI4K2BQ8TCG2 481 aa9.89□□□□□ -0.83
TRIO-217ENST00000511019 MYLIPQ8WY64 445 aa9.89□□□□□ -0.83
TRIO-217ENST00000511019 CHMP4CQ96CF2 233 aa9.89□□□□□ -0.83
TRIO-217ENST00000511019 GMCL1Q96IK5 515 aa9.89□□□□□ -0.83
TRIO-217ENST00000511019 AGBL1Q96MI9 1066 aa9.89□□□□□ -0.83
TRIO-217ENST00000511019 TRERF1Q96PN7 1200 aa9.89□□□□□ -0.83
TRIO-217ENST00000511019 TTYH1Q9H313 450 aaPredicted RBP9.89□□□□□ -0.83
TRIO-217ENST00000511019 ACAD9Q9H845 621 aa9.89□□□□□ -0.83
TRIO-217ENST00000511019 HOMER2Q9NSB8 354 aa9.89□□□□□ -0.83
TRIO-217ENST00000511019 STX8Q9UNK0 236 aa9.89□□□□□ -0.83
TRIO-217ENST00000511019 PCDHB15Q9Y5E8 787 aa9.89□□□□□ -0.83
TRIO-217ENST00000511019 SZT2Q5T011 3432 aa9.89□□□□□ -0.83
TRIO-217ENST00000511019 TMEM265A0A087WTH1 108 aa9.88□□□□□ -0.83
TRIO-217ENST00000511019 A0A0U1RQG5 324 aaPredicted RBP9.88□□□□□ -0.83
TRIO-217ENST00000511019 SOWAHBA6NEL2 793 aa9.88□□□□□ -0.83
TRIO-217ENST00000511019 PLA2G6O60733 806 aa9.88□□□□□ -0.83
TRIO-217ENST00000511019 ALAS1P13196 640 aa9.88□□□□□ -0.83
TRIO-217ENST00000511019 FOSL2P15408 326 aa9.88□□□□□ -0.83
TRIO-217ENST00000511019 PPIGQ13427 754 aaKnown RBP eCLIP9.88□□□□□ -0.831e-7■■■□□ 17.1
TRIO-217ENST00000511019 IQSEC1Q6DN90 963 aa9.88□□□□□ -0.83
TRIO-217ENST00000511019 FAM133AQ8N9E0 248 aa9.88□□□□□ -0.83
TRIO-217ENST00000511019 FGD4Q96M96 766 aa9.88□□□□□ -0.83
TRIO-217ENST00000511019 AP5M1Q9H0R1 490 aa9.88□□□□□ -0.83
TRIO-217ENST00000511019 UPF3AQ9H1J1 476 aaKnown RBP9.88□□□□□ -0.83
TRIO-217ENST00000511019 INCENPQ9NQS7 918 aa9.88□□□□□ -0.83
TRIO-217ENST00000511019 RNF146Q9NTX7 359 aa9.88□□□□□ -0.83
TRIO-217ENST00000511019 TBX21Q9UL17 535 aa9.88□□□□□ -0.83
TRIO-217ENST00000511019 ZNF536O15090 1300 aa9.87□□□□□ -0.83
TRIO-217ENST00000511019 RANBP2P49792 3224 aaKnown RBP9.87□□□□□ -0.83
TRIO-217ENST00000511019 DYNC1LI2O43237 492 aaPredicted RBP9.87□□□□□ -0.83
TRIO-217ENST00000511019 ADCY6O43306 1168 aa9.87□□□□□ -0.83
TRIO-217ENST00000511019 ZEB2O60315 1214 aa9.87□□□□□ -0.83
TRIO-217ENST00000511019 RANBP6O60518 1105 aaKnown RBP9.87□□□□□ -0.83
TRIO-217ENST00000511019 CABYRO75952 493 aa9.87□□□□□ -0.83
TRIO-217ENST00000511019 MX1P20591 662 aa9.87□□□□□ -0.83
TRIO-217ENST00000511019 NKX3-2P78367 333 aa9.87□□□□□ -0.83
TRIO-217ENST00000511019 BEX3Q00994 111 aa9.87□□□□□ -0.83
TRIO-217ENST00000511019 CTDSPL2Q05D32 466 aa9.87□□□□□ -0.83
TRIO-217ENST00000511019 ANKRD45Q5TZF3 282 aa9.87□□□□□ -0.83
TRIO-217ENST00000511019 CCDC129Q6ZRS4 1044 aa9.87□□□□□ -0.83
TRIO-217ENST00000511019 KCTD1Q719H9 257 aa9.87□□□□□ -0.83
TRIO-217ENST00000511019 OTUD7AQ8TE49 926 aaPredicted RBP9.87□□□□□ -0.83
TRIO-217ENST00000511019 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.87□□□□□ -0.83
TRIO-217ENST00000511019 KATNBL1Q9H079 304 aa9.87□□□□□ -0.83
TRIO-217ENST00000511019 A1CFQ9NQ94 594 aaKnown RBP9.87□□□□□ -0.83
TRIO-217ENST00000511019 IL17RBQ9NRM6 502 aa9.87□□□□□ -0.83
TRIO-217ENST00000511019 PRR12Q9ULL5 1215 aa9.87□□□□□ -0.83
TRIO-217ENST00000511019 MYH8P13535 1937 aa9.87□□□□□ -0.83
TRIO-217ENST00000511019 ZNFX1Q9P2E3 1918 aaKnown RBP9.87□□□□□ -0.83
TRIO-217ENST00000511019 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.86□□□□□ -0.83
TRIO-217ENST00000511019 CTAGE5O15320 804 aa9.86□□□□□ -0.83
TRIO-217ENST00000511019 NMT2O60551 498 aa9.86□□□□□ -0.83
TRIO-217ENST00000511019 ABCB7O75027 752 aa9.86□□□□□ -0.83
TRIO-217ENST00000511019 CSF2RAP15509 400 aa9.86□□□□□ -0.83
TRIO-217ENST00000511019 SNAP25P60880 206 aa9.86□□□□□ -0.83
TRIO-217ENST00000511019 GRIN2CQ14957 1233 aa9.86□□□□□ -0.83
TRIO-217ENST00000511019 TMEM240Q5SV17 173 aa9.86□□□□□ -0.83
TRIO-217ENST00000511019 CXCL17Q6UXB2 119 aa9.86□□□□□ -0.83
TRIO-217ENST00000511019 ZNF365Q70YC5 407 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms