RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 FANCBQ8NB91 859 aa12.11□□□□□ -0.47
NR1I3-227ENST00000510951 ERO1AQ96HE7 468 aa12.11□□□□□ -0.47
NR1I3-227ENST00000510951 MOV10L1Q9BXT6 1211 aaKnown RBP12.11□□□□□ -0.47
NR1I3-227ENST00000510951 RANBP17Q9H2T7 1088 aaKnown RBP12.11□□□□□ -0.47
NR1I3-227ENST00000510951 EFCC1Q9HA90 598 aa12.11□□□□□ -0.47
NR1I3-227ENST00000510951 CWC22Q9HCG8 908 aaKnown RBP12.11□□□□□ -0.47
NR1I3-227ENST00000510951 HOMER2Q9NSB8 354 aa12.11□□□□□ -0.47
NR1I3-227ENST00000510951 ZNF214Q9UL59 606 aaPredicted RBP12.11□□□□□ -0.47
NR1I3-227ENST00000510951 ADAMTS5Q9UNA0 930 aa12.11□□□□□ -0.47
NR1I3-227ENST00000510951 ZNF236Q9UL36 1845 aa12.11□□□□□ -0.47
NR1I3-227ENST00000510951 CDC27P30260 824 aa12.1□□□□□ -0.47
NR1I3-227ENST00000510951 PSMC4P43686 418 aa12.1□□□□□ -0.47
NR1I3-227ENST00000510951 FCGRTP55899 365 aa12.1□□□□□ -0.47
NR1I3-227ENST00000510951 CCT2P78371 535 aaKnown RBP12.1□□□□□ -0.47
NR1I3-227ENST00000510951 CCNA1P78396 465 aa12.1□□□□□ -0.47
NR1I3-227ENST00000510951 RABEP1Q15276 862 aa12.1□□□□□ -0.47
NR1I3-227ENST00000510951 NOM1Q5C9Z4 860 aaKnown RBP12.1□□□□□ -0.47
NR1I3-227ENST00000510951 TMTC3Q6ZXV5 915 aa12.1□□□□□ -0.47
NR1I3-227ENST00000510951 NCAPG2Q86XI2 1143 aa12.1□□□□□ -0.47
NR1I3-227ENST00000510951 FBXL16Q8N461 479 aa12.1□□□□□ -0.47
NR1I3-227ENST00000510951 CCDC82Q8N4S0 544 aa12.1□□□□□ -0.47
NR1I3-227ENST00000510951 TRIM47Q96LD4 638 aa12.1□□□□□ -0.47
NR1I3-227ENST00000510951 AGBL1Q96MI9 1066 aa12.1□□□□□ -0.47
NR1I3-227ENST00000510951 MAP3K14Q99558 947 aa12.1□□□□□ -0.47
NR1I3-227ENST00000510951 TEX13BQ9BXU2 312 aa12.1□□□□□ -0.47
NR1I3-227ENST00000510951 JMJD4Q9H9V9 463 aa12.1□□□□□ -0.47
NR1I3-227ENST00000510951 NCOA5Q9HCD5 579 aaKnown RBP12.1□□□□□ -0.47
NR1I3-227ENST00000510951 CCPG1Q9ULG6 757 aa12.1□□□□□ -0.47
NR1I3-227ENST00000510951 TPCN1Q9ULQ1 816 aa12.1□□□□□ -0.47
NR1I3-227ENST00000510951 HPS5Q9UPZ3 1129 aa12.1□□□□□ -0.47
NR1I3-227ENST00000510951 MCM3APO60318 1980 aa12.1□□□□□ -0.47
NR1I3-227ENST00000510951 ZNF536O15090 1300 aa12.1□□□□□ -0.47
NR1I3-227ENST00000510951 NID2Q14112 1375 aa12.09□□□□□ -0.47
NR1I3-227ENST00000510951 hCG_1642624A0A1W2PR95 340 aa12.09□□□□□ -0.47
NR1I3-227ENST00000510951 TNPO2O14787 897 aaKnown RBP12.09□□□□□ -0.47
NR1I3-227ENST00000510951 CYTH3O43739 400 aa12.09□□□□□ -0.47
NR1I3-227ENST00000510951 PPFIA3O75145 1194 aa12.09□□□□□ -0.47
NR1I3-227ENST00000510951 LARGE1O95461 756 aa12.09□□□□□ -0.47
NR1I3-227ENST00000510951 FMNL1O95466 1100 aaPredicted RBP12.09□□□□□ -0.47
NR1I3-227ENST00000510951 ERCC3P19447 782 aa12.09□□□□□ -0.47
NR1I3-227ENST00000510951 PDIA3P30101 505 aaKnown RBP12.09□□□□□ -0.47
NR1I3-227ENST00000510951 STAT3P40763 770 aa12.09□□□□□ -0.47
NR1I3-227ENST00000510951 ANKRD1Q15327 319 aa12.09□□□□□ -0.47
NR1I3-227ENST00000510951 QRICH1Q2TAL8 776 aa12.09□□□□□ -0.47
NR1I3-227ENST00000510951 USH1GQ495M9 461 aa12.09□□□□□ -0.47
NR1I3-227ENST00000510951 SRBD1Q8N5C6 995 aaKnown RBP12.09□□□□□ -0.47
NR1I3-227ENST00000510951 PIGSQ96S52 555 aa12.09□□□□□ -0.47
NR1I3-227ENST00000510951 RBM28Q9NW13 759 aaKnown RBP12.09□□□□□ -0.47
NR1I3-227ENST00000510951 RIPK3Q9Y572 518 aa12.09□□□□□ -0.47
NR1I3-227ENST00000510951 CNTNAP5Q8WYK1 1306 aa12.09□□□□□ -0.47
NR1I3-227ENST00000510951 FDX1P10109 184 aa12.08□□□□□ -0.48
NR1I3-227ENST00000510951 ALAS1P13196 640 aa12.08□□□□□ -0.48
NR1I3-227ENST00000510951 MAPK4P31152 587 aa12.08□□□□□ -0.48
NR1I3-227ENST00000510951 GNAQP50148 359 aa12.08□□□□□ -0.48
NR1I3-227ENST00000510951 RCAN1P53805 252 aa12.08□□□□□ -0.48
NR1I3-227ENST00000510951 EVCP57679 992 aa12.08□□□□□ -0.48
NR1I3-227ENST00000510951 GPR142Q7Z601 462 aa12.08□□□□□ -0.48
NR1I3-227ENST00000510951 RIOX2Q8IUF8 465 aa12.08□□□□□ -0.48
NR1I3-227ENST00000510951 SPZ1Q9BXG8 430 aa12.08□□□□□ -0.48
NR1I3-227ENST00000510951 ALDH8A1Q9H2A2 487 aaPredicted RBP12.08□□□□□ -0.48
NR1I3-227ENST00000510951 FAM217BQ9NTX9 383 aaPredicted RBP12.08□□□□□ -0.48
NR1I3-227ENST00000510951 TRIM17Q9Y577 477 aa12.08□□□□□ -0.48
NR1I3-227ENST00000510951 ATP2A1O14983 1001 aa12.07□□□□□ -0.48
NR1I3-227ENST00000510951 PPP1R11O60927 126 aaPredicted RBP12.07□□□□□ -0.48
NR1I3-227ENST00000510951 DTNBO60941 627 aa12.07□□□□□ -0.48
NR1I3-227ENST00000510951 ICAM1P05362 532 aa12.07□□□□□ -0.48
NR1I3-227ENST00000510951 ADD1P35611 737 aaKnown RBP12.07□□□□□ -0.48
NR1I3-227ENST00000510951 OAZ1P54368 228 aa12.07□□□□□ -0.48
NR1I3-227ENST00000510951 PLEKHH3Q7Z736 793 aa12.07□□□□□ -0.48
NR1I3-227ENST00000510951 NECAB1Q8N987 351 aa12.07□□□□□ -0.48
NR1I3-227ENST00000510951 SHCBP1Q8NEM2 672 aa12.07□□□□□ -0.48
NR1I3-227ENST00000510951 COA7Q96BR5 231 aa12.07□□□□□ -0.48
NR1I3-227ENST00000510951 RRP36Q96EU6 259 aaKnown RBP12.07□□□□□ -0.48
NR1I3-227ENST00000510951 ZNF274Q96GC6 653 aaPredicted RBP12.07□□□□□ -0.48
NR1I3-227ENST00000510951 LZTS2Q9BRK4 669 aa12.07□□□□□ -0.48
NR1I3-227ENST00000510951 SLKQ9H2G2 1235 aaPredicted RBP12.07□□□□□ -0.48
NR1I3-227ENST00000510951 RIOX1Q9H6W3 641 aa12.07□□□□□ -0.48
NR1I3-227ENST00000510951 RNF146Q9NTX7 359 aa12.07□□□□□ -0.48
NR1I3-227ENST00000510951 IVNS1ABPQ9Y6Y0 642 aa12.07□□□□□ -0.48
NR1I3-227ENST00000510951 CCDC196A0A1B0GTZ2 297 aa12.06□□□□□ -0.48
NR1I3-227ENST00000510951 ZBTB5O15062 677 aa12.06□□□□□ -0.48
NR1I3-227ENST00000510951 ST18O60284 1047 aa12.06□□□□□ -0.48
NR1I3-227ENST00000510951 CD2BP2O95400 341 aaKnown RBP12.06□□□□□ -0.48
NR1I3-227ENST00000510951 SLC25A27O95847 323 aa12.06□□□□□ -0.48
NR1I3-227ENST00000510951 COPB2P35606 906 aa12.06□□□□□ -0.48
NR1I3-227ENST00000510951 PRKCZQ05513 592 aa12.06□□□□□ -0.48
NR1I3-227ENST00000510951 SCRN1Q12765 414 aa12.06□□□□□ -0.48
NR1I3-227ENST00000510951 ME3Q16798 604 aa12.06□□□□□ -0.48
NR1I3-227ENST00000510951 MUM1L1Q5H9M0 696 aa12.06□□□□□ -0.48
NR1I3-227ENST00000510951 OTOP1Q7RTM1 612 aa12.06□□□□□ -0.48
NR1I3-227ENST00000510951 FBXO11Q86XK2 927 aa12.06□□□□□ -0.48
NR1I3-227ENST00000510951 PHKBQ93100 1093 aa12.06□□□□□ -0.48
NR1I3-227ENST00000510951 MTMR8Q96EF0 704 aa12.06□□□□□ -0.48
NR1I3-227ENST00000510951 TRERF1Q96PN7 1200 aa12.06□□□□□ -0.48
NR1I3-227ENST00000510951 MMP19Q99542 508 aa12.06□□□□□ -0.48
NR1I3-227ENST00000510951 MROH8Q9H579 483 aa12.06□□□□□ -0.48
NR1I3-227ENST00000510951 PRDM10Q9NQV6 1147 aa12.06□□□□□ -0.48
NR1I3-227ENST00000510951 SEC63Q9UGP8 760 aaKnown RBP12.06□□□□□ -0.48
NR1I3-227ENST00000510951 GABRQQ9UN88 632 aa12.06□□□□□ -0.48
NR1I3-227ENST00000510951 PNMA6FA0A0J9YX94 578 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms