RNA–Protein interactions for RNA: ENST00000510756.5

CAST-233, Transcript of calpastatin, human

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-233	ENST00000510756	CUL5	Q93034	780 aa		14.01	□□□□□ -0.17
CAST-233	ENST00000510756	PYM1	Q9BRP8	204 aa	Known RBP	14.01	□□□□□ -0.17
CAST-233	ENST00000510756	MYPN	Q86TC9	1320 aa		14.01	□□□□□ -0.17
CAST-233	ENST00000510756	PRPH	P41219	470 aa		14	□□□□□ -0.17
CAST-233	ENST00000510756	FAM160A1	Q05DH4	1040 aa		14	□□□□□ -0.17
CAST-233	ENST00000510756	CDC37	Q16543	378 aa	Predicted RBP	14	□□□□□ -0.17
CAST-233	ENST00000510756	SHROOM1	Q2M3G4	852 aa	Predicted RBP	14	□□□□□ -0.17
CAST-233	ENST00000510756	QRICH1	Q2TAL8	776 aa		14	□□□□□ -0.17
CAST-233	ENST00000510756	TTC38	Q5R3I4	469 aa		14	□□□□□ -0.17
CAST-233	ENST00000510756	TTBK2	Q6IQ55	1244 aa		14	□□□□□ -0.17
CAST-233	ENST00000510756	REXO1	Q8N1G1	1221 aa	Known RBP	14	□□□□□ -0.17
CAST-233	ENST00000510756	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	14	□□□□□ -0.17
CAST-233	ENST00000510756	TMEM63C	Q9P1W3	806 aa		14	□□□□□ -0.17
CAST-233	ENST00000510756	PARP14	Q460N5	1801 aa		14	□□□□□ -0.17
CAST-233	ENST00000510756	hCG_1642624	A0A1W2PR95	340 aa		13.99	□□□□□ -0.17
CAST-233	ENST00000510756	FSD2	A1L4K1	749 aa		13.99	□□□□□ -0.17
CAST-233	ENST00000510756	USP17L10	C9JJH3	530 aa		13.99	□□□□□ -0.17
CAST-233	ENST00000510756	PIK3CD	O00329	1044 aa		13.99	□□□□□ -0.17
CAST-233	ENST00000510756	FOS	P01100	380 aa	Predicted RBP	13.99	□□□□□ -0.17
CAST-233	ENST00000510756	ATP2C1	P98194	919 aa	Predicted RBP	13.99	□□□□□ -0.17
CAST-233	ENST00000510756	GHRHR	Q02643	423 aa		13.99	□□□□□ -0.17
CAST-233	ENST00000510756	NONO	Q15233	471 aa	Known RBP eCLIP	13.99	□□□□□ -0.17
CAST-233	ENST00000510756	SH3D19	Q5HYK7	790 aa		13.99	□□□□□ -0.17
CAST-233	ENST00000510756	MOXD1	Q6UVY6	613 aa		13.99	□□□□□ -0.17
CAST-233	ENST00000510756	ENGASE	Q8NFI3	743 aa		13.99	□□□□□ -0.17
CAST-233	ENST00000510756	TMEM232	C9JQI7	657 aa		13.99	□□□□□ -0.17
CAST-233	ENST00000510756	PPP1R12B	O60237	982 aa	Predicted RBP	13.99	□□□□□ -0.17
CAST-233	ENST00000510756	VEGFA	P15692	232 aa	Predicted RBP	13.99	□□□□□ -0.17
CAST-233	ENST00000510756	PTPRA	P18433	802 aa		13.99	□□□□□ -0.17
CAST-233	ENST00000510756	NF2	P35240	595 aa		13.99	□□□□□ -0.17
CAST-233	ENST00000510756	ECE1	P42892	770 aa		13.99	□□□□□ -0.17
CAST-233	ENST00000510756	FBXO11	Q86XK2	927 aa		13.99	□□□□□ -0.17
CAST-233	ENST00000510756	ZNF280C	Q8ND82	737 aa		13.99	□□□□□ -0.17
CAST-233	ENST00000510756	CLSTN2	Q9H4D0	955 aa		13.99	□□□□□ -0.17
CAST-233	ENST00000510756	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.99	□□□□□ -0.17
CAST-233	ENST00000510756	MAP3K20	Q9NYL2	800 aa	Known RBP	13.99	□□□□□ -0.17
CAST-233	ENST00000510756	PRR12	Q9ULL5	1215 aa		13.99	□□□□□ -0.17
CAST-233	ENST00000510756	HPSE	Q9Y251	543 aa		13.99	□□□□□ -0.17
CAST-233	ENST00000510756	BACE1	P56817	501 aa		13.98	□□□□□ -0.17
CAST-233	ENST00000510756	MAP3K9	P80192	1104 aa		13.98	□□□□□ -0.17
CAST-233	ENST00000510756	RESP18	Q5W5W9	173 aa		13.98	□□□□□ -0.17
CAST-233	ENST00000510756	HOMER1	Q86YM7	354 aa		13.98	□□□□□ -0.17
CAST-233	ENST00000510756	CCAR1	Q8IX12	1150 aa	Known RBP	13.98	□□□□□ -0.17
CAST-233	ENST00000510756	WRNIP1	Q96S55	665 aa		13.98	□□□□□ -0.17
CAST-233	ENST00000510756	USP25	Q9UHP3	1055 aa		13.98	□□□□□ -0.17
CAST-233	ENST00000510756	MTMR7	Q9Y216	660 aa		13.98	□□□□□ -0.17
CAST-233	ENST00000510756	ABCB11	O95342	1321 aa		13.98	□□□□□ -0.17
CAST-233	ENST00000510756	SOCS7	O14512	581 aa		13.98	□□□□□ -0.17
CAST-233	ENST00000510756	GCFC2	P16383	781 aa	Known RBP	13.98	□□□□□ -0.17
CAST-233	ENST00000510756	IREB2	P48200	963 aa	Known RBP	13.98	□□□□□ -0.17
CAST-233	ENST00000510756	LRSAM1	Q6UWE0	723 aa		13.98	□□□□□ -0.17
CAST-233	ENST00000510756	RASGRP2	Q7LDG7	609 aa		13.98	□□□□□ -0.17
CAST-233	ENST00000510756	FEZ1	Q99689	392 aa		13.98	□□□□□ -0.17
CAST-233	ENST00000510756	VAT1L	Q9HCJ6	419 aa		13.98	□□□□□ -0.17
CAST-233	ENST00000510756	FBXO2	Q9UK22	296 aa	Predicted RBP	13.98	□□□□□ -0.17
CAST-233	ENST00000510756	OTOF	Q9HC10	1997 aa		13.98	□□□□□ -0.17
CAST-233	ENST00000510756	LOC285556	D6RIA3	1793 aa		13.98	□□□□□ -0.17
CAST-233	ENST00000510756	SLC26A4	O43511	780 aa		13.97	□□□□□ -0.17
CAST-233	ENST00000510756	PPP1R11	O60927	126 aa	Predicted RBP	13.97	□□□□□ -0.17
CAST-233	ENST00000510756	USP2	O75604	605 aa	Predicted RBP	13.97	□□□□□ -0.17
CAST-233	ENST00000510756	L1TD1	Q5T7N2	865 aa	Known RBP	13.97	□□□□□ -0.17
CAST-233	ENST00000510756	PIK3AP1	Q6ZUJ8	805 aa		13.97	□□□□□ -0.17
CAST-233	ENST00000510756	PRPF38A	Q8NAV1	312 aa	Known RBP	13.97	□□□□□ -0.17
CAST-233	ENST00000510756	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
CAST-233	ENST00000510756	NUP62CL	Q9H1M0	184 aa		13.97	□□□□□ -0.17
CAST-233	ENST00000510756	CAVIN2	O95810	425 aa		13.97	□□□□□ -0.17
CAST-233	ENST00000510756	INPP5B	P32019	993 aa		13.97	□□□□□ -0.17
CAST-233	ENST00000510756	OAZ1	P54368	228 aa		13.97	□□□□□ -0.17
CAST-233	ENST00000510756	FAM83B	Q5T0W9	1011 aa		13.97	□□□□□ -0.17
CAST-233	ENST00000510756	PPP4R3A	Q6IN85	833 aa		13.97	□□□□□ -0.17
CAST-233	ENST00000510756	NEK8	Q86SG6	692 aa		13.97	□□□□□ -0.17
CAST-233	ENST00000510756	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.97	□□□□□ -0.17
CAST-233	ENST00000510756	FSIP1	Q8NA03	581 aa		13.97	□□□□□ -0.17
CAST-233	ENST00000510756	PSTPIP2	Q9H939	334 aa		13.97	□□□□□ -0.17
CAST-233	ENST00000510756	MRPL11	Q9Y3B7	192 aa	Known RBP	13.97	□□□□□ -0.17
CAST-233	ENST00000510756	PCDHB6	Q9Y5E3	794 aa		13.97	□□□□□ -0.17
CAST-233	ENST00000510756	PCDHA1	Q9Y5I3	950 aa		13.97	□□□□□ -0.17
CAST-233	ENST00000510756	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.96	□□□□□ -0.17
CAST-233	ENST00000510756	USP11	P51784	963 aa		13.96	□□□□□ -0.17
CAST-233	ENST00000510756	CEBPZ	Q03701	1054 aa	Known RBP	13.96	□□□□□ -0.17
CAST-233	ENST00000510756	SNW1	Q13573	536 aa	Known RBP	13.96	□□□□□ -0.17
CAST-233	ENST00000510756	KRT26	Q7Z3Y9	468 aa		13.96	□□□□□ -0.17
CAST-233	ENST00000510756	SLF1	Q9BQI6	1058 aa		13.96	□□□□□ -0.17
CAST-233	ENST00000510756	CPVL	Q9H3G5	476 aa		13.96	□□□□□ -0.17
CAST-233	ENST00000510756	FAM13B	Q9NYF5	915 aa		13.96	□□□□□ -0.17
CAST-233	ENST00000510756	RABGAP1	Q9Y3P9	1069 aa		13.96	□□□□□ -0.17
CAST-233	ENST00000510756	LIG1	P18858	919 aa		13.96	□□□□□ -0.18
CAST-233	ENST00000510756	SLC16A2	P36021	539 aa		13.96	□□□□□ -0.18
CAST-233	ENST00000510756	FKBP1B	P68106	108 aa		13.96	□□□□□ -0.18
CAST-233	ENST00000510756	EARS2	Q5JPH6	523 aa	Known RBP	13.96	□□□□□ -0.18
CAST-233	ENST00000510756	KIAA1755	Q5JYT7	1200 aa		13.96	□□□□□ -0.18
CAST-233	ENST00000510756	C4orf32	Q8N8J7	132 aa		13.96	□□□□□ -0.18
CAST-233	ENST00000510756	AFG3L2	Q9Y4W6	797 aa		13.96	□□□□□ -0.18
CAST-233	ENST00000510756	PTPRF	P10586	1907 aa		13.95	□□□□□ -0.18
CAST-233	ENST00000510756	KIN	O60870	393 aa	Known RBP	13.95	□□□□□ -0.18
CAST-233	ENST00000510756	LONP1	P36776	959 aa	Known RBP	13.95	□□□□□ -0.18
CAST-233	ENST00000510756	CCDC34	Q96HJ3	373 aa		13.95	□□□□□ -0.18
CAST-233	ENST00000510756	AK8	Q96MA6	479 aa		13.95	□□□□□ -0.18
CAST-233	ENST00000510756	DACT1	Q9NYF0	836 aa		13.95	□□□□□ -0.18
CAST-233	ENST00000510756	CYP3A7-CYP3A51P	A0A087WV96	503 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms