RNA–Protein interactions for RNA: ENST00000510676.6

PTCD2-208, Transcript of pentatricopeptide repeat domain 2, human

TSL 5

Gene PTCD2, Length 1,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD2-208	ENST00000510676	RAI14	Q9P0K7	980 aa		13.23	□□□□□ -0.29
PTCD2-208	ENST00000510676	PLXNA3	P51805	1871 aa		13.23	□□□□□ -0.29
PTCD2-208	ENST00000510676		A0A1W2PRG0	241 aa		13.22	□□□□□ -0.29
PTCD2-208	ENST00000510676	RFC2	P35250	354 aa		13.22	□□□□□ -0.29
PTCD2-208	ENST00000510676	ID4	P47928	161 aa		13.22	□□□□□ -0.29
PTCD2-208	ENST00000510676	ERVK-21	P61565	698 aa		13.22	□□□□□ -0.29
PTCD2-208	ENST00000510676	TIMM10	P62072	90 aa		13.22	□□□□□ -0.29
PTCD2-208	ENST00000510676	ITGA7	Q13683	1181 aa		13.22	□□□□□ -0.29
PTCD2-208	ENST00000510676	ACVR2B	Q13705	512 aa		13.22	□□□□□ -0.29
PTCD2-208	ENST00000510676	MVP	Q14764	893 aa	Known RBP	13.22	□□□□□ -0.29
PTCD2-208	ENST00000510676	CERKL	Q49MI3	558 aa	Predicted RBP	13.22	□□□□□ -0.29
PTCD2-208	ENST00000510676	PI16	Q6UXB8	463 aa		13.22	□□□□□ -0.29
PTCD2-208	ENST00000510676	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.22	□□□□□ -0.29
PTCD2-208	ENST00000510676	SPATA5	Q8NB90	893 aa		13.22	□□□□□ -0.29
PTCD2-208	ENST00000510676	NOL10	Q9BSC4	688 aa	Known RBP	13.22	□□□□□ -0.29
PTCD2-208	ENST00000510676	SIL1	Q9H173	461 aa		13.22	□□□□□ -0.29
PTCD2-208	ENST00000510676	MUTYH	Q9UIF7	546 aa		13.22	□□□□□ -0.29
PTCD2-208	ENST00000510676	SERPINB13	Q9UIV8	391 aa		13.22	□□□□□ -0.29
PTCD2-208	ENST00000510676	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.22	□□□□□ -0.29
PTCD2-208	ENST00000510676	KMT2E	Q8IZD2	1858 aa		13.21	□□□□□ -0.29
PTCD2-208	ENST00000510676	DNAJC25-GNG10	A0A024R161	153 aa		13.21	□□□□□ -0.29
PTCD2-208	ENST00000510676	LCHN	A4D1U4	455 aa		13.21	□□□□□ -0.29
PTCD2-208	ENST00000510676		H3BQ06	376 aa	Predicted RBP	13.21	□□□□□ -0.29
PTCD2-208	ENST00000510676	EXOSC9	Q06265	439 aa	Known RBP	13.21	□□□□□ -0.29
PTCD2-208	ENST00000510676	CCDC144B	Q3MJ40	725 aa		13.21	□□□□□ -0.29
PTCD2-208	ENST00000510676	KIAA1755	Q5JYT7	1200 aa		13.21	□□□□□ -0.29
PTCD2-208	ENST00000510676	CXCL17	Q6UXB2	119 aa		13.21	□□□□□ -0.29
PTCD2-208	ENST00000510676	TRIM67	Q6ZTA4	783 aa		13.21	□□□□□ -0.29
PTCD2-208	ENST00000510676	ASCL5	Q7RTU5	278 aa		13.21	□□□□□ -0.29
PTCD2-208	ENST00000510676	MAGEB6	Q8N7X4	407 aa		13.21	□□□□□ -0.29
PTCD2-208	ENST00000510676	PBXIP1	Q96AQ6	731 aa		13.21	□□□□□ -0.29
PTCD2-208	ENST00000510676	XAGE2	Q96GT9	111 aa		13.21	□□□□□ -0.29
PTCD2-208	ENST00000510676	SAP30BP	Q9UHR5	308 aa	Known RBP	13.21	□□□□□ -0.29
PTCD2-208	ENST00000510676	TNKS	O95271	1327 aa		13.2	□□□□□ -0.3
PTCD2-208	ENST00000510676	CEP250	Q9BV73	2442 aa		13.2	□□□□□ -0.3
PTCD2-208	ENST00000510676	TMEM221	A6NGB7	291 aa		13.2	□□□□□ -0.3
PTCD2-208	ENST00000510676		M0R296	226 aa		13.2	□□□□□ -0.3
PTCD2-208	ENST00000510676	FLOT1	O75955	427 aa		13.2	□□□□□ -0.3
PTCD2-208	ENST00000510676	BAIAP3	O94812	1187 aa		13.2	□□□□□ -0.3
PTCD2-208	ENST00000510676	SHMT1	P34896	483 aa		13.2	□□□□□ -0.3
PTCD2-208	ENST00000510676	COPB2	P35606	906 aa		13.2	□□□□□ -0.3
PTCD2-208	ENST00000510676	ADGRA1	Q86SQ6	560 aa		13.2	□□□□□ -0.3
PTCD2-208	ENST00000510676	SUGP1	Q8IWZ8	645 aa	Known RBP	13.2	□□□□□ -0.3
PTCD2-208	ENST00000510676	FBXL6	Q8N531	539 aa		13.2	□□□□□ -0.3
PTCD2-208	ENST00000510676	ATOH1	Q92858	354 aa	Predicted RBP	13.2	□□□□□ -0.3
PTCD2-208	ENST00000510676	POP1	Q99575	1024 aa	Known RBP	13.2	□□□□□ -0.3
PTCD2-208	ENST00000510676	ABHD16B	Q9H3Z7	469 aa		13.2	□□□□□ -0.3
PTCD2-208	ENST00000510676	CABP5	Q9NP86	173 aa		13.2	□□□□□ -0.3
PTCD2-208	ENST00000510676	ASTN1	O14525	1302 aa		13.19	□□□□□ -0.3
PTCD2-208	ENST00000510676	USP24	Q9UPU5	2620 aa		13.19	□□□□□ -0.3
PTCD2-208	ENST00000510676	PARP14	Q460N5	1801 aa		13.19	□□□□□ -0.3
PTCD2-208	ENST00000510676		A0A1B0GUL7	405 aa		13.19	□□□□□ -0.3
PTCD2-208	ENST00000510676	PRR23A	A6NEV1	266 aa		13.19	□□□□□ -0.3
PTCD2-208	ENST00000510676	ARID4A	P29374	1257 aa	Predicted RBP	13.19	□□□□□ -0.3
PTCD2-208	ENST00000510676	DEFB128	Q7Z7B8	93 aa		13.19	□□□□□ -0.3
PTCD2-208	ENST00000510676	RNF135	Q8IUD6	432 aa		13.19	□□□□□ -0.3
PTCD2-208	ENST00000510676	PABPC5	Q96DU9	382 aa	Known RBP	13.19	□□□□□ -0.3
PTCD2-208	ENST00000510676	TGS1	Q96RS0	853 aa	Known RBP	13.19	□□□□□ -0.3
PTCD2-208	ENST00000510676	KATNBL1	Q9H079	304 aa		13.19	□□□□□ -0.3
PTCD2-208	ENST00000510676	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.19	□□□□□ -0.3
PTCD2-208	ENST00000510676	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.19	□□□□□ -0.3
PTCD2-208	ENST00000510676	ZNF214	Q9UL59	606 aa	Predicted RBP	13.19	□□□□□ -0.3
PTCD2-208	ENST00000510676	BEX3	Q00994	111 aa		13.18	□□□□□ -0.3
PTCD2-208	ENST00000510676	SEPT2	Q15019	361 aa		13.18	□□□□□ -0.3
PTCD2-208	ENST00000510676	SMAD2	Q15796	467 aa	Known RBP	13.18	□□□□□ -0.3
PTCD2-208	ENST00000510676	NAA16	Q6N069	864 aa	Predicted RBP	13.18	□□□□□ -0.3
PTCD2-208	ENST00000510676	REPS2	Q8NFH8	660 aa		13.18	□□□□□ -0.3
PTCD2-208	ENST00000510676	MRPL38	Q96DV4	380 aa	Known RBP	13.18	□□□□□ -0.3
PTCD2-208	ENST00000510676	COPRS	Q9NQ92	184 aa		13.18	□□□□□ -0.3
PTCD2-208	ENST00000510676	LRP2BP	Q9P2M1	347 aa		13.18	□□□□□ -0.3
PTCD2-208	ENST00000510676	TRPC6	Q9Y210	931 aa		13.18	□□□□□ -0.3
PTCD2-208	ENST00000510676	SCN5A	Q14524	2016 aa		13.17	□□□□□ -0.3
PTCD2-208	ENST00000510676	IGSF3	O75054	1194 aa		13.17	□□□□□ -0.3
PTCD2-208	ENST00000510676	SUPT20HL2	P0C7V6	817 aa		13.17	□□□□□ -0.3
PTCD2-208	ENST00000510676	STAT3	P40763	770 aa		13.17	□□□□□ -0.3
PTCD2-208	ENST00000510676	NUBP1	P53384	320 aa		13.17	□□□□□ -0.3
PTCD2-208	ENST00000510676	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.17	□□□□□ -0.3
PTCD2-208	ENST00000510676	FSD1	Q9BTV5	496 aa		13.17	□□□□□ -0.3
PTCD2-208	ENST00000510676	COL4A6	Q14031	1691 aa		13.17	□□□□□ -0.3
PTCD2-208	ENST00000510676	TET1	Q8NFU7	2136 aa		13.16	□□□□□ -0.3
PTCD2-208	ENST00000510676	PTPRS	Q13332	1948 aa		13.16	□□□□□ -0.3
PTCD2-208	ENST00000510676	MED19	A0JLT2	244 aa	Predicted RBP	13.16	□□□□□ -0.3
PTCD2-208	ENST00000510676	LINC01553	A4QN01	128 aa		13.16	□□□□□ -0.3
PTCD2-208	ENST00000510676	NBL1	P41271	181 aa		13.16	□□□□□ -0.3
PTCD2-208	ENST00000510676	MCAM	P43121	646 aa		13.16	□□□□□ -0.3
PTCD2-208	ENST00000510676	FSCN1	Q16658	493 aa	Known RBP	13.16	□□□□□ -0.3
PTCD2-208	ENST00000510676	FGD4	Q96M96	766 aa		13.16	□□□□□ -0.3
PTCD2-208	ENST00000510676	CTNNA3	Q9UI47	895 aa		13.16	□□□□□ -0.3
PTCD2-208	ENST00000510676	GNE	Q9Y223	722 aa	Known RBP	13.16	□□□□□ -0.3
PTCD2-208	ENST00000510676	AKAP2	Q9Y2D5	859 aa		13.16	□□□□□ -0.3
PTCD2-208	ENST00000510676	MAP1B	P46821	2468 aa	Known RBP	13.16	□□□□□ -0.3
PTCD2-208	ENST00000510676	HAX1	O00165	279 aa		13.15	□□□□□ -0.3
PTCD2-208	ENST00000510676	VWA5A	O00534	786 aa		13.15	□□□□□ -0.3
PTCD2-208	ENST00000510676	WDR46	O15213	610 aa	Known RBP	13.15	□□□□□ -0.3
PTCD2-208	ENST00000510676	IQCF3	P0C7M6	154 aa		13.15	□□□□□ -0.3
PTCD2-208	ENST00000510676	CYP2C9	P11712	490 aa		13.15	□□□□□ -0.3
PTCD2-208	ENST00000510676	VCP	P55072	806 aa	Known RBP	13.15	□□□□□ -0.3
PTCD2-208	ENST00000510676	GABPA	Q06546	454 aa		13.15	□□□□□ -0.3
PTCD2-208	ENST00000510676	TIGD5	Q53EQ6	642 aa		13.15	□□□□□ -0.3
PTCD2-208	ENST00000510676	SIAH1	Q8IUQ4	282 aa		13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms