RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 PNMA1Q8ND90 353 aa16.57■□□□□ 0.24
USP38-202ENST00000510377 SMCR8Q8TEV9 937 aaPredicted RBP16.57■□□□□ 0.24
USP38-202ENST00000510377 MMS19Q96T76 1030 aa16.57■□□□□ 0.24
USP38-202ENST00000510377 ZNF287Q9HBT7 754 aa16.57■□□□□ 0.24
USP38-202ENST00000510377 BAG3O95817 575 aa16.56■□□□□ 0.24
USP38-202ENST00000510377 RASSF7Q02833 373 aa16.56■□□□□ 0.24
USP38-202ENST00000510377 KRT26Q7Z3Y9 468 aa16.56■□□□□ 0.24
USP38-202ENST00000510377 NBPF5PQ86XG9 351 aaPredicted RBP16.56■□□□□ 0.24
USP38-202ENST00000510377 CPVLQ9H3G5 476 aa16.56■□□□□ 0.24
USP38-202ENST00000510377 NHEJ1Q9H9Q4 299 aaPredicted RBP16.56■□□□□ 0.24
USP38-202ENST00000510377 MYO1AQ9UBC5 1043 aa16.56■□□□□ 0.24
USP38-202ENST00000510377 STK36Q9NRP7 1315 aa16.56■□□□□ 0.24
USP38-202ENST00000510377 PPFIA1Q13136 1202 aa16.56■□□□□ 0.24
USP38-202ENST00000510377 MB21D1Q8N884 522 aa16.56■□□□□ 0.24
USP38-202ENST00000510377 NOX5Q96PH1 765 aa16.56■□□□□ 0.24
USP38-202ENST00000510377 BIN2Q9UBW5 565 aaPredicted RBP16.56■□□□□ 0.24
USP38-202ENST00000510377 F8W031 263 aaPredicted RBP16.56■□□□□ 0.24
USP38-202ENST00000510377 PICALMQ13492 652 aa16.56■□□□□ 0.24
USP38-202ENST00000510377 ZSCAN29Q8IWY8 852 aaPredicted RBP16.56■□□□□ 0.24
USP38-202ENST00000510377 UBLCP1Q8WVY7 318 aaPredicted RBP16.56■□□□□ 0.24
USP38-202ENST00000510377 CAPN7Q9Y6W3 813 aa16.56■□□□□ 0.24
USP38-202ENST00000510377 CNNM4Q6P4Q7 775 aa16.55■□□□□ 0.24
USP38-202ENST00000510377 SRLQ86TD4 932 aa16.55■□□□□ 0.24
USP38-202ENST00000510377 TRIM58Q8NG06 486 aa16.55■□□□□ 0.24
USP38-202ENST00000510377 CCDC43Q96MW1 224 aaKnown RBP16.55■□□□□ 0.24
USP38-202ENST00000510377 CYP2D6P10635 497 aa16.55■□□□□ 0.24
USP38-202ENST00000510377 LRRC41Q15345 812 aa16.55■□□□□ 0.24
USP38-202ENST00000510377 STAG1Q8WVM7 1258 aa16.55■□□□□ 0.24
USP38-202ENST00000510377 PPANQ9NQ55 473 aaKnown RBP16.55■□□□□ 0.24
USP38-202ENST00000510377 PRPF3O43395 683 aaKnown RBP16.55■□□□□ 0.24
USP38-202ENST00000510377 ZNF76P36508 570 aa16.55■□□□□ 0.24
USP38-202ENST00000510377 GUCY2DQ02846 1103 aa16.55■□□□□ 0.24
USP38-202ENST00000510377 VPS36Q86VN1 386 aa16.55■□□□□ 0.24
USP38-202ENST00000510377 MAPKAPK5Q8IW41 473 aa16.55■□□□□ 0.24
USP38-202ENST00000510377 DYDC1Q8WWB3 177 aa16.55■□□□□ 0.24
USP38-202ENST00000510377 RRP36Q96EU6 259 aaKnown RBP16.55■□□□□ 0.24
USP38-202ENST00000510377 SELENOOQ9BVL4 669 aa16.55■□□□□ 0.24
USP38-202ENST00000510377 BEND6Q5SZJ8 279 aaPredicted RBP16.55■□□□□ 0.24
USP38-202ENST00000510377 RASGRP2Q7LDG7 609 aa16.55■□□□□ 0.24
USP38-202ENST00000510377 CCDC114Q96M63 670 aa16.55■□□□□ 0.24
USP38-202ENST00000510377 CEP104O60308 925 aa16.54■□□□□ 0.24
USP38-202ENST00000510377 HIBADHP31937 336 aaKnown RBP16.54■□□□□ 0.24
USP38-202ENST00000510377 NONOQ15233 471 aaKnown RBP eCLIP16.54■□□□□ 0.24
USP38-202ENST00000510377 NTRK3Q16288 839 aa16.54■□□□□ 0.24
USP38-202ENST00000510377 SNX29Q8TEQ0 813 aa16.54■□□□□ 0.24
USP38-202ENST00000510377 RPGRIP1Q96KN7 1286 aa16.54■□□□□ 0.24
USP38-202ENST00000510377 QTRT2Q9H974 415 aaKnown RBP16.54■□□□□ 0.24
USP38-202ENST00000510377 MLXIPQ9HAP2 919 aa16.54■□□□□ 0.24
USP38-202ENST00000510377 GPCPD1Q9NPB8 672 aa16.54■□□□□ 0.24
USP38-202ENST00000510377 IFT20Q8IY31 132 aa16.54■□□□□ 0.24
USP38-202ENST00000510377 NLRP3Q96P20 1036 aa16.54■□□□□ 0.24
USP38-202ENST00000510377 LCMT1Q9UIC8 334 aa16.54■□□□□ 0.24
USP38-202ENST00000510377 ERVK-24P63145 666 aa16.54■□□□□ 0.24
USP38-202ENST00000510377 DCAF17Q5H9S7 520 aaPredicted RBP16.54■□□□□ 0.24
USP38-202ENST00000510377 RSRC2Q7L4I2 434 aaKnown RBP16.54■□□□□ 0.24
USP38-202ENST00000510377 GNA11P29992 359 aa16.53■□□□□ 0.24
USP38-202ENST00000510377 LONP1P36776 959 aaKnown RBP16.53■□□□□ 0.24
USP38-202ENST00000510377 SUSD4Q5VX71 490 aa16.53■□□□□ 0.24
USP38-202ENST00000510377 SMARCAL1Q9NZC9 954 aa16.53■□□□□ 0.24
USP38-202ENST00000510377 JRKLQ9Y4A0 524 aa16.53■□□□□ 0.24
USP38-202ENST00000510377 HYOU1Q9Y4L1 999 aa16.53■□□□□ 0.24
USP38-202ENST00000510377 C3P01024 1663 aa16.53■□□□□ 0.24
USP38-202ENST00000510377 EIF4A3P38919 411 aaKnown RBP16.53■□□□□ 0.24
USP38-202ENST00000510377 CFAP221Q4G0U5 840 aa16.53■□□□□ 0.24
USP38-202ENST00000510377 SCLT1Q96NL6 688 aa16.53■□□□□ 0.24
USP38-202ENST00000510377 SMCO2A6NFE2 343 aa16.53■□□□□ 0.24
USP38-202ENST00000510377 CCDC121Q6ZUS5 278 aa16.53■□□□□ 0.24
USP38-202ENST00000510377 HPS3Q969F9 1004 aa16.53■□□□□ 0.24
USP38-202ENST00000510377 E7EVH7 732 aa16.52■□□□□ 0.24
USP38-202ENST00000510377 PPFIA4O75335 1185 aa16.52■□□□□ 0.24
USP38-202ENST00000510377 LDHBP07195 334 aaKnown RBP16.52■□□□□ 0.24
USP38-202ENST00000510377 EEF1GP26641 437 aaKnown RBP16.52■□□□□ 0.24
USP38-202ENST00000510377 USP14P54578 494 aa16.52■□□□□ 0.24
USP38-202ENST00000510377 EHHADHQ08426 723 aa16.52■□□□□ 0.24
USP38-202ENST00000510377 PDCLQ13371 301 aa16.52■□□□□ 0.24
USP38-202ENST00000510377 SLC9C1Q4G0N8 1177 aa16.52■□□□□ 0.24
USP38-202ENST00000510377 CEP85LQ5SZL2 805 aa16.52■□□□□ 0.24
USP38-202ENST00000510377 FOXR1Q6PIV2 292 aa16.52■□□□□ 0.24
USP38-202ENST00000510377 TGFBRAP1Q8WUH2 860 aa16.52■□□□□ 0.24
USP38-202ENST00000510377 P2RX5Q93086 422 aa16.52■□□□□ 0.24
USP38-202ENST00000510377 DYNLL2Q96FJ2 89 aa16.52■□□□□ 0.24
USP38-202ENST00000510377 ANKZF1Q9H8Y5 726 aa16.52■□□□□ 0.24
USP38-202ENST00000510377 NCK2O43639 380 aa16.52■□□□□ 0.24
USP38-202ENST00000510377 FTCDO95954 541 aa16.52■□□□□ 0.24
USP38-202ENST00000510377 PLCG1P19174 1290 aa16.52■□□□□ 0.24
USP38-202ENST00000510377 DPYDQ12882 1025 aa16.52■□□□□ 0.24
USP38-202ENST00000510377 CPLX4Q7Z7G2 160 aa16.52■□□□□ 0.24
USP38-202ENST00000510377 KIFC2Q96AC6 838 aa16.52■□□□□ 0.24
USP38-202ENST00000510377 AGPAT5Q9NUQ2 364 aa16.52■□□□□ 0.24
USP38-202ENST00000510377 ESYT3A0FGR9 886 aa16.52■□□□□ 0.23
USP38-202ENST00000510377 ZNF18P17022 549 aa16.52■□□□□ 0.23
USP38-202ENST00000510377 KCNQ4P56696 695 aa16.52■□□□□ 0.23
USP38-202ENST00000510377 TNNC1P63316 161 aa16.52■□□□□ 0.23
USP38-202ENST00000510377 FAM217BQ9NTX9 383 aaPredicted RBP16.52■□□□□ 0.23
USP38-202ENST00000510377 WDR17Q8IZU2 1322 aa16.52■□□□□ 0.23
USP38-202ENST00000510377 LGALS16A8MUM7 142 aa16.51■□□□□ 0.23
USP38-202ENST00000510377 EARS2Q5JPH6 523 aaKnown RBP16.51■□□□□ 0.23
USP38-202ENST00000510377 TMTC3Q6ZXV5 915 aa16.51■□□□□ 0.23
USP38-202ENST00000510377 SELENOSQ9BQE4 189 aa16.51■□□□□ 0.23
USP38-202ENST00000510377 DISC1Q9NRI5 854 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms