RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 AIFM3Q96NN9 605 aa19.22■□□□□ 0.67
SCAMP1-203ENST00000510030 NUP88Q99567 741 aaPredicted RBP19.22■□□□□ 0.67
SCAMP1-203ENST00000510030 ZMYND12Q9H0C1 365 aa19.22■□□□□ 0.67
SCAMP1-203ENST00000510030 ELP3Q9H9T3 547 aa19.22■□□□□ 0.67
SCAMP1-203ENST00000510030 EMILIN3Q9NT22 766 aa19.22■□□□□ 0.67
SCAMP1-203ENST00000510030 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.22■□□□□ 0.67
SCAMP1-203ENST00000510030 PRR12Q9ULL5 1215 aa19.22■□□□□ 0.67
SCAMP1-203ENST00000510030 PCDHA4Q9UN74 947 aa19.22■□□□□ 0.67
SCAMP1-203ENST00000510030 KCNH4Q9UQ05 1017 aa19.22■□□□□ 0.67
SCAMP1-203ENST00000510030 CTDP1Q9Y5B0 961 aaPredicted RBP19.22■□□□□ 0.67
SCAMP1-203ENST00000510030 CELF2O95319 508 aaKnown RBP19.21■□□□□ 0.67
SCAMP1-203ENST00000510030 HMGCS2P54868 508 aa19.21■□□□□ 0.67
SCAMP1-203ENST00000510030 RILPL1Q5EBL4 403 aa19.21■□□□□ 0.67
SCAMP1-203ENST00000510030 FOXD4L5Q5VV16 416 aaPredicted RBP19.21■□□□□ 0.67
SCAMP1-203ENST00000510030 CCDC84Q86UT8 332 aaPredicted RBP19.21■□□□□ 0.67
SCAMP1-203ENST00000510030 FBXO11Q86XK2 927 aa19.21■□□□□ 0.67
SCAMP1-203ENST00000510030 FOXD4L4Q8WXT5 416 aaPredicted RBP19.21■□□□□ 0.67
SCAMP1-203ENST00000510030 PIBF1Q8WXW3 757 aa19.21■□□□□ 0.67
SCAMP1-203ENST00000510030 OTUD5Q96G74 571 aa19.21■□□□□ 0.67
SCAMP1-203ENST00000510030 RANBP17Q9H2T7 1088 aaKnown RBP19.21■□□□□ 0.67
SCAMP1-203ENST00000510030 RPAP3Q9H6T3 665 aaPredicted RBP19.21■□□□□ 0.67
SCAMP1-203ENST00000510030 BAZ2BQ9UIF8 2168 aaKnown RBP19.21■□□□□ 0.67
SCAMP1-203ENST00000510030 TSKSQ9UJT2 592 aa19.21■□□□□ 0.67
SCAMP1-203ENST00000510030 NOL7Q9UMY1 257 aaKnown RBP19.21■□□□□ 0.67
SCAMP1-203ENST00000510030 FZD1Q9UP38 647 aa19.21■□□□□ 0.67
SCAMP1-203ENST00000510030 A0A0G2JLL6 359 aaPredicted RBP19.2■□□□□ 0.66
SCAMP1-203ENST00000510030 hCG_1642624A0A1W2PR95 340 aa19.2■□□□□ 0.66
SCAMP1-203ENST00000510030 USP17L15C9J2P7 530 aa19.2■□□□□ 0.66
SCAMP1-203ENST00000510030 USP17L13C9JLJ4 530 aa19.2■□□□□ 0.66
SCAMP1-203ENST00000510030 USP17L11C9JVI0 530 aa19.2■□□□□ 0.66
SCAMP1-203ENST00000510030 USP17L18D6R9N7 530 aa19.2■□□□□ 0.66
SCAMP1-203ENST00000510030 USP17L22D6RA61 530 aa19.2■□□□□ 0.66
SCAMP1-203ENST00000510030 USP17L17D6RBQ6 530 aa19.2■□□□□ 0.66
SCAMP1-203ENST00000510030 USP17L19D6RCP7 530 aa19.2■□□□□ 0.66
SCAMP1-203ENST00000510030 USP17L20D6RJB6 530 aa19.2■□□□□ 0.66
SCAMP1-203ENST00000510030 AOC2O75106 756 aa19.2■□□□□ 0.66
SCAMP1-203ENST00000510030 FLOT1O75955 427 aa19.2■□□□□ 0.66
SCAMP1-203ENST00000510030 MRPL12P52815 198 aaKnown RBP19.2■□□□□ 0.66
SCAMP1-203ENST00000510030 USP17L24Q0WX57 530 aa19.2■□□□□ 0.66
SCAMP1-203ENST00000510030 SNAPC2Q13487 334 aa19.2■□□□□ 0.66
SCAMP1-203ENST00000510030 SLC35G1Q2M3R5 365 aa19.2■□□□□ 0.66
SCAMP1-203ENST00000510030 QRICH1Q2TAL8 776 aa19.2■□□□□ 0.66
SCAMP1-203ENST00000510030 PRRT2Q7Z6L0 340 aaPredicted RBP19.2■□□□□ 0.66
SCAMP1-203ENST00000510030 GPKOWQ92917 476 aaPredicted RBP eCLIP19.2■□□□□ 0.66
SCAMP1-203ENST00000510030 WBP1LQ9NX94 342 aa19.2■□□□□ 0.66
SCAMP1-203ENST00000510030 DTNBO60941 627 aa19.19■□□□□ 0.66
SCAMP1-203ENST00000510030 ZBED4O75132 1171 aa19.19■□□□□ 0.66
SCAMP1-203ENST00000510030 ZBTB48P10074 688 aaPredicted RBP19.19■□□□□ 0.66
SCAMP1-203ENST00000510030 TRAPPC10P48553 1259 aa19.19■□□□□ 0.66
SCAMP1-203ENST00000510030 ADCY7P51828 1080 aa19.19■□□□□ 0.66
SCAMP1-203ENST00000510030 OAZ1P54368 228 aa19.19■□□□□ 0.66
SCAMP1-203ENST00000510030 BLIDQ8IZY5 108 aa19.19■□□□□ 0.66
SCAMP1-203ENST00000510030 CUL5Q93034 780 aa19.19■□□□□ 0.66
SCAMP1-203ENST00000510030 KIFC2Q96AC6 838 aa19.19■□□□□ 0.66
SCAMP1-203ENST00000510030 OPTNQ96CV9 577 aa19.19■□□□□ 0.66
SCAMP1-203ENST00000510030 CAPNS2Q96L46 248 aa19.19■□□□□ 0.66
SCAMP1-203ENST00000510030 MAF1Q9H063 256 aa19.19■□□□□ 0.66
SCAMP1-203ENST00000510030 CPVLQ9H3G5 476 aa19.19■□□□□ 0.66
SCAMP1-203ENST00000510030 HOXC10Q9NYD6 342 aa19.19■□□□□ 0.66
SCAMP1-203ENST00000510030 PPP1R9AQ9ULJ8 1098 aa19.19■□□□□ 0.66
SCAMP1-203ENST00000510030 KCNJ14Q9UNX9 436 aa19.19■□□□□ 0.66
SCAMP1-203ENST00000510030 PCDHA1Q9Y5I3 950 aa19.19■□□□□ 0.66
SCAMP1-203ENST00000510030 SMCO2A6NFE2 343 aa19.18■□□□□ 0.66
SCAMP1-203ENST00000510030 UBE2Q2LH0YL09 131 aa19.18■□□□□ 0.66
SCAMP1-203ENST00000510030 HSPA8P11142 646 aaKnown RBP19.18■□□□□ 0.66
SCAMP1-203ENST00000510030 NCLP19338 710 aaKnown RBP19.18■□□□□ 0.66
SCAMP1-203ENST00000510030 COG2Q14746 738 aa19.18■□□□□ 0.66
SCAMP1-203ENST00000510030 KIAA1755Q5JYT7 1200 aa19.18■□□□□ 0.66
SCAMP1-203ENST00000510030 MYSM1Q5VVJ2 828 aa19.18■□□□□ 0.66
SCAMP1-203ENST00000510030 OTUD7BQ6GQQ9 843 aa19.18■□□□□ 0.66
SCAMP1-203ENST00000510030 KRT25Q7Z3Z0 450 aa19.18■□□□□ 0.66
SCAMP1-203ENST00000510030 REXO1Q8N1G1 1221 aaKnown RBP19.18■□□□□ 0.66
SCAMP1-203ENST00000510030 ABCB11O95342 1321 aa19.18■□□□□ 0.66
SCAMP1-203ENST00000510030 PARP14Q460N5 1801 aa19.18■□□□□ 0.66
SCAMP1-203ENST00000510030 THSD7BQ9C0I4 1608 aa19.18■□□□□ 0.66
SCAMP1-203ENST00000510030 BTBD18B2RXH4 712 aa19.17■□□□□ 0.66
SCAMP1-203ENST00000510030 IRF6O14896 467 aa19.17■□□□□ 0.66
SCAMP1-203ENST00000510030 BMP15O95972 392 aa19.17■□□□□ 0.66
SCAMP1-203ENST00000510030 ICAM1P05362 532 aa19.17■□□□□ 0.66
SCAMP1-203ENST00000510030 MCM4P33991 863 aa19.17■□□□□ 0.66
SCAMP1-203ENST00000510030 SAMD3Q8N6K7 520 aa19.17■□□□□ 0.66
SCAMP1-203ENST00000510030 MB21D1Q8N884 522 aa19.17■□□□□ 0.66
SCAMP1-203ENST00000510030 GTF3C2Q8WUA4 911 aaPredicted RBP19.17■□□□□ 0.66
SCAMP1-203ENST00000510030 CLMNQ96JQ2 1002 aa19.17■□□□□ 0.66
SCAMP1-203ENST00000510030 RIC8AQ9NPQ8 531 aa19.17■□□□□ 0.66
SCAMP1-203ENST00000510030 CEP131Q9UPN4 1083 aa19.17■□□□□ 0.66
SCAMP1-203ENST00000510030 MRPL11Q9Y3B7 192 aaKnown RBP19.17■□□□□ 0.66
SCAMP1-203ENST00000510030 CCDC194A0A1B0GVG4 234 aa19.16■□□□□ 0.66
SCAMP1-203ENST00000510030 HOXA7P31268 230 aaPredicted RBP19.16■□□□□ 0.66
SCAMP1-203ENST00000510030 CTCFP49711 727 aaPredicted RBP19.16■□□□□ 0.66
SCAMP1-203ENST00000510030 GTF2A2P52657 109 aa19.16■□□□□ 0.66
SCAMP1-203ENST00000510030 CATSPERGQ6ZRH7 1159 aa19.16■□□□□ 0.66
SCAMP1-203ENST00000510030 TMEM87AQ8NBN3 555 aa19.16■□□□□ 0.66
SCAMP1-203ENST00000510030 SLC38A10Q9HBR0 1119 aa19.16■□□□□ 0.66
SCAMP1-203ENST00000510030 GJB4Q9NTQ9 266 aa19.16■□□□□ 0.66
SCAMP1-203ENST00000510030 POLR3EQ9NVU0 708 aa19.16■□□□□ 0.66
SCAMP1-203ENST00000510030 PNMA3Q9UL41 463 aa19.16■□□□□ 0.66
SCAMP1-203ENST00000510030 AGTPBP1Q9UPW5 1226 aa19.16■□□□□ 0.66
SCAMP1-203ENST00000510030 TLL2Q9Y6L7 1015 aa19.16■□□□□ 0.66
SCAMP1-203ENST00000510030 ELP1O95163 1332 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms