RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 ATP2A1O14983 1001 aa11.98□□□□□ -0.49
SCARB2-204ENST00000509994 IGHA2P01877 340 aa11.98□□□□□ -0.49
SCARB2-204ENST00000509994 C6orf222P0C671 652 aaPredicted RBP11.98□□□□□ -0.49
SCARB2-204ENST00000509994 ZNF865P0CJ78 1059 aaPredicted RBP11.98□□□□□ -0.49
SCARB2-204ENST00000509994 FDX1P10109 184 aa11.98□□□□□ -0.49
SCARB2-204ENST00000509994 OAZ1P54368 228 aa11.98□□□□□ -0.49
SCARB2-204ENST00000509994 HAND2P61296 217 aa11.98□□□□□ -0.49
SCARB2-204ENST00000509994 LRIT3Q3SXY7 679 aa11.98□□□□□ -0.49
SCARB2-204ENST00000509994 MCMDC2Q4G0Z9 681 aa11.98□□□□□ -0.49
SCARB2-204ENST00000509994 ARMCX2Q7L311 632 aa11.98□□□□□ -0.49
SCARB2-204ENST00000509994 MSL3Q8N5Y2 521 aaKnown RBP11.98□□□□□ -0.49
SCARB2-204ENST00000509994 STAG1Q8WVM7 1258 aa11.98□□□□□ -0.49
SCARB2-204ENST00000509994 GMCL1Q96IK5 515 aa11.98□□□□□ -0.49
SCARB2-204ENST00000509994 AGBL1Q96MI9 1066 aa11.98□□□□□ -0.49
SCARB2-204ENST00000509994 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.98□□□□□ -0.49
SCARB2-204ENST00000509994 PHF24Q9UPV7 400 aa11.98□□□□□ -0.49
SCARB2-204ENST00000509994 SALL3Q9BXA9 1300 aa11.97□□□□□ -0.49
SCARB2-204ENST00000509994 MFAP1P55081 439 aaKnown RBP11.97□□□□□ -0.49
SCARB2-204ENST00000509994 TLE2Q04725 743 aa11.97□□□□□ -0.49
SCARB2-204ENST00000509994 C1QBPQ07021 282 aaKnown RBP11.97□□□□□ -0.49
SCARB2-204ENST00000509994 NMIQ13287 307 aaPredicted RBP11.97□□□□□ -0.49
SCARB2-204ENST00000509994 ACVR2BQ13705 512 aa11.97□□□□□ -0.49
SCARB2-204ENST00000509994 NSMFQ6X4W1 530 aa11.97□□□□□ -0.49
SCARB2-204ENST00000509994 SLC17A8Q8NDX2 589 aa11.97□□□□□ -0.49
SCARB2-204ENST00000509994 NUP133Q8WUM0 1156 aa11.97□□□□□ -0.49
SCARB2-204ENST00000509994 BADQ92934 168 aa11.97□□□□□ -0.49
SCARB2-204ENST00000509994 TRERF1Q96PN7 1200 aa11.97□□□□□ -0.49
SCARB2-204ENST00000509994 STARD7Q9NQZ5 370 aa11.97□□□□□ -0.49
SCARB2-204ENST00000509994 PDLIM7Q9NR12 457 aa11.97□□□□□ -0.49
SCARB2-204ENST00000509994 DIAPH3Q9NSV4 1193 aa11.97□□□□□ -0.49
SCARB2-204ENST00000509994 CCPG1Q9ULG6 757 aa11.97□□□□□ -0.49
SCARB2-204ENST00000509994 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.97□□□□□ -0.49
SCARB2-204ENST00000509994 FRMPD2Q68DX3 1309 aaPredicted RBP11.96□□□□□ -0.49
SCARB2-204ENST00000509994 CCDC171Q6TFL3 1326 aa11.96□□□□□ -0.49
SCARB2-204ENST00000509994 DNAJC25-GNG10A0A024R161 153 aa11.96□□□□□ -0.49
SCARB2-204ENST00000509994 DCDC2CA8MYV0 355 aa11.96□□□□□ -0.49
SCARB2-204ENST00000509994 SNAI1O95863 264 aaPredicted RBP11.96□□□□□ -0.49
SCARB2-204ENST00000509994 CLTBP09497 229 aa11.96□□□□□ -0.49
SCARB2-204ENST00000509994 RAG1P15918 1043 aa11.96□□□□□ -0.49
SCARB2-204ENST00000509994 ACLYP53396 1101 aa11.96□□□□□ -0.49
SCARB2-204ENST00000509994 CNTN2Q02246 1040 aa11.96□□□□□ -0.49
SCARB2-204ENST00000509994 TKFCQ3LXA3 575 aa11.96□□□□□ -0.49
SCARB2-204ENST00000509994 CCDC144BQ3MJ40 725 aa11.96□□□□□ -0.49
SCARB2-204ENST00000509994 RCSD1Q6JBY9 416 aa11.96□□□□□ -0.49
SCARB2-204ENST00000509994 RASGRP2Q7LDG7 609 aa11.96□□□□□ -0.49
SCARB2-204ENST00000509994 ZNF467Q7Z7K2 595 aaPredicted RBP11.96□□□□□ -0.49
SCARB2-204ENST00000509994 CCDC144CPQ8IYA2 1237 aa11.96□□□□□ -0.49
SCARB2-204ENST00000509994 DCAF4Q8WV16 495 aa11.96□□□□□ -0.49
SCARB2-204ENST00000509994 FAM161BQ96MY7 647 aa11.96□□□□□ -0.49
SCARB2-204ENST00000509994 ABHD16BQ9H3Z7 469 aa11.96□□□□□ -0.49
SCARB2-204ENST00000509994 GPCPD1Q9NPB8 672 aa11.96□□□□□ -0.49
SCARB2-204ENST00000509994 TMEM39AQ9NV64 488 aa11.96□□□□□ -0.49
SCARB2-204ENST00000509994 PRR12Q9ULL5 1215 aa11.96□□□□□ -0.49
SCARB2-204ENST00000509994 MYH6P13533 1939 aa11.96□□□□□ -0.5
SCARB2-204ENST00000509994 COL6A3P12111 3177 aa11.95□□□□□ -0.5
SCARB2-204ENST00000509994 LAMA4Q16363 1823 aa11.95□□□□□ -0.5
SCARB2-204ENST00000509994 FOXP2O15409 715 aa11.95□□□□□ -0.5
SCARB2-204ENST00000509994 ORC4O43929 436 aa11.95□□□□□ -0.5
SCARB2-204ENST00000509994 DUSP11O75319 330 aaKnown RBP11.95□□□□□ -0.5
SCARB2-204ENST00000509994 FGAP02671 866 aa11.95□□□□□ -0.5
SCARB2-204ENST00000509994 HSPD1P10809 573 aaKnown RBP11.95□□□□□ -0.5
SCARB2-204ENST00000509994 SLC16A2P36021 539 aa11.95□□□□□ -0.5
SCARB2-204ENST00000509994 AAMPQ13685 434 aa11.95□□□□□ -0.5
SCARB2-204ENST00000509994 KCNA10Q16322 511 aa11.95□□□□□ -0.5
SCARB2-204ENST00000509994 GPR153Q6NV75 609 aa11.95□□□□□ -0.5
SCARB2-204ENST00000509994 MAMDC4Q6UXC1 1216 aa11.95□□□□□ -0.5
SCARB2-204ENST00000509994 MFSD6Q6ZSS7 791 aa11.95□□□□□ -0.5
SCARB2-204ENST00000509994 SH3RF1Q7Z6J0 888 aa11.95□□□□□ -0.5
SCARB2-204ENST00000509994 ZNF589Q86UQ0 364 aaPredicted RBP11.95□□□□□ -0.5
SCARB2-204ENST00000509994 PCSK9Q8NBP7 692 aaKnown RBP11.95□□□□□ -0.5
SCARB2-204ENST00000509994 GLT1D1Q96MS3 346 aa11.95□□□□□ -0.5
SCARB2-204ENST00000509994 TSEN34Q9BSV6 310 aaKnown RBP11.95□□□□□ -0.5
SCARB2-204ENST00000509994 A1CFQ9NQ94 594 aaKnown RBP11.95□□□□□ -0.5
SCARB2-204ENST00000509994 IL17RBQ9NRM6 502 aa11.95□□□□□ -0.5
SCARB2-204ENST00000509994 ANAPC4Q9UJX5 808 aa11.95□□□□□ -0.5
SCARB2-204ENST00000509994 TACC3Q9Y6A5 838 aa11.95□□□□□ -0.5
SCARB2-204ENST00000509994 LRRC37A2A6NM11 1700 aa11.94□□□□□ -0.5
SCARB2-204ENST00000509994 PTPDC1A2A3K4 754 aa11.94□□□□□ -0.5
SCARB2-204ENST00000509994 TRIM43BA6NCK2 446 aa11.94□□□□□ -0.5
SCARB2-204ENST00000509994 MOXD2PA6NHM9 499 aa11.94□□□□□ -0.5
SCARB2-204ENST00000509994 ASB14A6NK59 587 aa11.94□□□□□ -0.5
SCARB2-204ENST00000509994 ADAMTS4O75173 837 aa11.94□□□□□ -0.5
SCARB2-204ENST00000509994 TOP1P11387 765 aaKnown RBP11.94□□□□□ -0.5
SCARB2-204ENST00000509994 SNX17Q15036 470 aa11.94□□□□□ -0.5
SCARB2-204ENST00000509994 SHHQ15465 462 aa11.94□□□□□ -0.5
SCARB2-204ENST00000509994 ALX1Q15699 326 aa11.94□□□□□ -0.5
SCARB2-204ENST00000509994 GNASQ5JWF2 1037 aa11.94□□□□□ -0.5
SCARB2-204ENST00000509994 ZNF697Q5TEC3 545 aa11.94□□□□□ -0.5
SCARB2-204ENST00000509994 SYDE2Q5VT97 1194 aa11.94□□□□□ -0.5
SCARB2-204ENST00000509994 EEPD1Q7L9B9 569 aa11.94□□□□□ -0.5
SCARB2-204ENST00000509994 CHD1LQ86WJ1 897 aa11.94□□□□□ -0.5
SCARB2-204ENST00000509994 TRIM43Q96BQ3 446 aaPredicted RBP11.94□□□□□ -0.5
SCARB2-204ENST00000509994 AP5M1Q9H0R1 490 aa11.94□□□□□ -0.5
SCARB2-204ENST00000509994 RNF41Q9H4P4 317 aaPredicted RBP11.94□□□□□ -0.5
SCARB2-204ENST00000509994 MROH7Q68CQ1 1323 aa11.93□□□□□ -0.5
SCARB2-204ENST00000509994 MYADML2A6NDP7 307 aa11.93□□□□□ -0.5
SCARB2-204ENST00000509994 ASGR1P07306 291 aa11.93□□□□□ -0.5
SCARB2-204ENST00000509994 TNFAIP2Q03169 654 aa11.93□□□□□ -0.5
SCARB2-204ENST00000509994 FPGSQ05932 587 aa11.93□□□□□ -0.5
SCARB2-204ENST00000509994 MUM1L1Q5H9M0 696 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms