RNA–Protein interactions for RNA: ENST00000509599.5

PTPN20-221, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-221ENST00000509599 TET1Q8NFU7 2136 aa11.89□□□□□ -0.51
PTPN20-221ENST00000509599 TPRP12270 2363 aaKnown RBP11.89□□□□□ -0.51
PTPN20-221ENST00000509599 SIP14410 1827 aa11.89□□□□□ -0.51
PTPN20-221ENST00000509599 ARVCFO00192 962 aa11.89□□□□□ -0.51
PTPN20-221ENST00000509599 AKR1A1P14550 325 aa11.89□□□□□ -0.51
PTPN20-221ENST00000509599 TCF15Q12870 199 aa11.89□□□□□ -0.51
PTPN20-221ENST00000509599 METTL16Q86W50 562 aaKnown RBP11.89□□□□□ -0.51
PTPN20-221ENST00000509599 SHCBP1Q8NEM2 672 aa11.89□□□□□ -0.51
PTPN20-221ENST00000509599 GLT1D1Q96MS3 346 aa11.89□□□□□ -0.51
PTPN20-221ENST00000509599 SPATC1LQ9H0A9 340 aa11.89□□□□□ -0.51
PTPN20-221ENST00000509599 ZBBXA8MT70 800 aa11.88□□□□□ -0.51
PTPN20-221ENST00000509599 EYA2O00167 538 aa11.88□□□□□ -0.51
PTPN20-221ENST00000509599 MAP4K4O95819 1239 aaPredicted RBP11.88□□□□□ -0.51
PTPN20-221ENST00000509599 KCNA5P22460 613 aa11.88□□□□□ -0.51
PTPN20-221ENST00000509599 RASGRF1Q13972 1273 aa11.88□□□□□ -0.51
PTPN20-221ENST00000509599 PTCRAQ6ISU1 281 aaPredicted RBP11.88□□□□□ -0.51
PTPN20-221ENST00000509599 ATG9AQ7Z3C6 839 aa11.88□□□□□ -0.51
PTPN20-221ENST00000509599 ABRAQ8N0Z2 381 aa11.88□□□□□ -0.51
PTPN20-221ENST00000509599 FEZ1Q99689 392 aa11.88□□□□□ -0.51
PTPN20-221ENST00000509599 WNT8AQ9H1J5 351 aa11.88□□□□□ -0.51
PTPN20-221ENST00000509599 HIPK3Q9H422 1215 aa11.88□□□□□ -0.51
PTPN20-221ENST00000509599 FAM86C1Q9NVL1 165 aa11.88□□□□□ -0.51
PTPN20-221ENST00000509599 MYO5AQ9Y4I1 1855 aaKnown RBP11.87□□□□□ -0.51
PTPN20-221ENST00000509599 MYO15AQ9UKN7 3530 aa11.87□□□□□ -0.51
PTPN20-221ENST00000509599 A0A0U1RQG5 324 aaPredicted RBP11.87□□□□□ -0.51
PTPN20-221ENST00000509599 TLR3O15455 904 aaKnown RBP11.87□□□□□ -0.51
PTPN20-221ENST00000509599 GH2P01242 217 aa11.87□□□□□ -0.51
PTPN20-221ENST00000509599 CCL23P55773 120 aa11.87□□□□□ -0.51
PTPN20-221ENST00000509599 TTLL4Q14679 1199 aa11.87□□□□□ -0.51
PTPN20-221ENST00000509599 ATP2B3Q16720 1220 aa11.87□□□□□ -0.51
PTPN20-221ENST00000509599 SPTY2D1Q68D10 685 aaPredicted RBP11.87□□□□□ -0.51
PTPN20-221ENST00000509599 TINF2Q9BSI4 451 aa11.87□□□□□ -0.51
PTPN20-221ENST00000509599 SRCIN1Q9C0H9 1055 aa11.87□□□□□ -0.51
PTPN20-221ENST00000509599 KIAA1683Q9H0B3 1180 aa11.87□□□□□ -0.51
PTPN20-221ENST00000509599 DHX36Q9H2U1 1008 aaKnown RBP11.87□□□□□ -0.51
PTPN20-221ENST00000509599 RPAP3Q9H6T3 665 aaPredicted RBP11.87□□□□□ -0.51
PTPN20-221ENST00000509599 CDHR5Q9HBB8 845 aa11.87□□□□□ -0.51
PTPN20-221ENST00000509599 PDS5AQ29RF7 1337 aaKnown RBP11.86□□□□□ -0.51
PTPN20-221ENST00000509599 ASGR1P07306 291 aa11.86□□□□□ -0.51
PTPN20-221ENST00000509599 CST5P28325 142 aaPredicted RBP11.86□□□□□ -0.51
PTPN20-221ENST00000509599 ADORA1P30542 326 aa11.86□□□□□ -0.51
PTPN20-221ENST00000509599 RFX5P48382 616 aaPredicted RBP11.86□□□□□ -0.51
PTPN20-221ENST00000509599 RALBP1Q15311 655 aa11.86□□□□□ -0.51
PTPN20-221ENST00000509599 CCDC102BQ68D86 513 aa11.86□□□□□ -0.51
PTPN20-221ENST00000509599 FOXP4Q8IVH2 680 aaPredicted RBP11.86□□□□□ -0.51
PTPN20-221ENST00000509599 TEX11Q8IYF3 940 aa11.86□□□□□ -0.51
PTPN20-221ENST00000509599 ACER1Q8TDN7 264 aa11.86□□□□□ -0.51
PTPN20-221ENST00000509599 SH3RF3Q8TEJ3 882 aaPredicted RBP11.86□□□□□ -0.51
PTPN20-221ENST00000509599 VTI1AQ96AJ9 217 aa11.86□□□□□ -0.51
PTPN20-221ENST00000509599 NOC4LQ9BVI4 516 aaKnown RBP11.86□□□□□ -0.51
PTPN20-221ENST00000509599 MROH8Q9H579 483 aa11.86□□□□□ -0.51
PTPN20-221ENST00000509599 ALG13Q9NP73 1137 aaKnown RBP11.86□□□□□ -0.51
PTPN20-221ENST00000509599 GVINP1Q7Z2Y8 2422 aa11.86□□□□□ -0.51
PTPN20-221ENST00000509599 ZNF536O15090 1300 aa11.86□□□□□ -0.51
PTPN20-221ENST00000509599 C3orf80F5H4A9 247 aa11.85□□□□□ -0.51
PTPN20-221ENST00000509599 PGK2P07205 417 aa11.85□□□□□ -0.51
PTPN20-221ENST00000509599 USP14P54578 494 aa11.85□□□□□ -0.51
PTPN20-221ENST00000509599 ZP2Q05996 745 aa11.85□□□□□ -0.51
PTPN20-221ENST00000509599 SLC4A10Q6U841 1118 aa11.85□□□□□ -0.51
PTPN20-221ENST00000509599 ERICH6Q7L0X2 663 aa11.85□□□□□ -0.51
PTPN20-221ENST00000509599 NCAPG2Q86XI2 1143 aa11.85□□□□□ -0.51
PTPN20-221ENST00000509599 CRACR2BQ8N4Y2 399 aaPredicted RBP11.85□□□□□ -0.51
PTPN20-221ENST00000509599 GDPD5Q8WTR4 605 aa11.85□□□□□ -0.51
PTPN20-221ENST00000509599 TATDN2Q93075 761 aa11.85□□□□□ -0.51
PTPN20-221ENST00000509599 LMCD1Q9NZU5 365 aa11.85□□□□□ -0.51
PTPN20-221ENST00000509599 COL4A6Q14031 1691 aa11.84□□□□□ -0.51
PTPN20-221ENST00000509599 ADCY6O43306 1168 aa11.84□□□□□ -0.51
PTPN20-221ENST00000509599 RNF40O75150 1001 aa11.84□□□□□ -0.51
PTPN20-221ENST00000509599 VAMP4O75379 141 aa11.84□□□□□ -0.51
PTPN20-221ENST00000509599 FCER1AP12319 257 aa11.84□□□□□ -0.51
PTPN20-221ENST00000509599 COG2Q14746 738 aa11.84□□□□□ -0.51
PTPN20-221ENST00000509599 ZNF792Q3KQV3 632 aa11.84□□□□□ -0.51
PTPN20-221ENST00000509599 RPUSD2Q8IZ73 545 aaKnown RBP11.84□□□□□ -0.51
PTPN20-221ENST00000509599 NSUN4Q96CB9 384 aaKnown RBP11.84□□□□□ -0.51
PTPN20-221ENST00000509599 SCLYQ96I15 445 aa11.84□□□□□ -0.51
PTPN20-221ENST00000509599 PALD1Q9ULE6 856 aa11.84□□□□□ -0.51
PTPN20-221ENST00000509599 MYO7AQ13402 2215 aa11.84□□□□□ -0.51
PTPN20-221ENST00000509599 TANC1Q9C0D5 1861 aa11.84□□□□□ -0.51
PTPN20-221ENST00000509599 VPS13AQ96RL7 3174 aa11.83□□□□□ -0.52
PTPN20-221ENST00000509599 DUSP11O75319 330 aaKnown RBP11.83□□□□□ -0.52
PTPN20-221ENST00000509599 LDHCP07864 332 aa11.83□□□□□ -0.52
PTPN20-221ENST00000509599 C6orf222P0C671 652 aaPredicted RBP11.83□□□□□ -0.52
PTPN20-221ENST00000509599 PLS1Q14651 629 aa11.83□□□□□ -0.52
PTPN20-221ENST00000509599 SLC43A3Q8NBI5 491 aa11.83□□□□□ -0.52
PTPN20-221ENST00000509599 PCSK9Q8NBP7 692 aaKnown RBP11.83□□□□□ -0.52
PTPN20-221ENST00000509599 AGBL1Q96MI9 1066 aa11.83□□□□□ -0.52
PTPN20-221ENST00000509599 PRRX2Q99811 253 aa11.83□□□□□ -0.52
PTPN20-221ENST00000509599 TRIM34Q9BYJ4 488 aa11.83□□□□□ -0.52
PTPN20-221ENST00000509599 TRIP12Q14669 1992 aaPredicted RBP11.83□□□□□ -0.52
PTPN20-221ENST00000509599 NCOR2Q9Y618 2525 aa11.83□□□□□ -0.52
PTPN20-221ENST00000509599 ATG2AQ2TAZ0 1938 aa11.82□□□□□ -0.52
PTPN20-221ENST00000509599 SNAI1O95863 264 aaPredicted RBP11.82□□□□□ -0.52
PTPN20-221ENST00000509599 IRS1P35568 1242 aa11.82□□□□□ -0.52
PTPN20-221ENST00000509599 BMP8AQ7Z5Y6 402 aa11.82□□□□□ -0.52
PTPN20-221ENST00000509599 MAPKAPK5Q8IW41 473 aa11.82□□□□□ -0.52
PTPN20-221ENST00000509599 NEK9Q8TD19 979 aa11.82□□□□□ -0.52
PTPN20-221ENST00000509599 SLC9A7Q96T83 725 aa11.82□□□□□ -0.52
PTPN20-221ENST00000509599 UPF3AQ9H1J1 476 aaKnown RBP11.82□□□□□ -0.52
PTPN20-221ENST00000509599 HOXC10Q9NYD6 342 aa11.82□□□□□ -0.52
PTPN20-221ENST00000509599 MUTYHQ9UIF7 546 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms