RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 ANKRD35Q8N283 1001 aa17.25■□□□□ 0.35
HMGCL-208ENST00000509389 CHST13Q8NET6 341 aa17.25■□□□□ 0.35
HMGCL-208ENST00000509389 TRIM43Q96BQ3 446 aaPredicted RBP17.25■□□□□ 0.35
HMGCL-208ENST00000509389 EVI5LQ96CN4 794 aa17.25■□□□□ 0.35
HMGCL-208ENST00000509389 FGD4Q96M96 766 aa17.25■□□□□ 0.35
HMGCL-208ENST00000509389 INCENPQ9NQS7 918 aa17.25■□□□□ 0.35
HMGCL-208ENST00000509389 FBXO40Q9UH90 709 aa17.25■□□□□ 0.35
HMGCL-208ENST00000509389 FAM184BQ9ULE4 1060 aa17.25■□□□□ 0.35
HMGCL-208ENST00000509389 SYNRGQ9UMZ2 1314 aa17.24■□□□□ 0.35
HMGCL-208ENST00000509389 A0A1W2PQ45 241 aaPredicted RBP17.24■□□□□ 0.35
HMGCL-208ENST00000509389 A0A1W2PQY0 241 aa17.24■□□□□ 0.35
HMGCL-208ENST00000509389 EIF5BO60841 1220 aaKnown RBP17.24■□□□□ 0.35
HMGCL-208ENST00000509389 CHMLP26374 656 aa17.24■□□□□ 0.35
HMGCL-208ENST00000509389 CTDSPL2Q05D32 466 aa17.24■□□□□ 0.35
HMGCL-208ENST00000509389 SHHQ15465 462 aa17.24■□□□□ 0.35
HMGCL-208ENST00000509389 GMCL1Q96IK5 515 aa17.24■□□□□ 0.35
HMGCL-208ENST00000509389 TSEN34Q9BSV6 310 aaKnown RBP17.24■□□□□ 0.35
HMGCL-208ENST00000509389 ZHX1Q9UKY1 873 aaPredicted RBP17.24■□□□□ 0.35
HMGCL-208ENST00000509389 STXBP5LQ9Y2K9 1186 aa17.24■□□□□ 0.35
HMGCL-208ENST00000509389 POTEB2H3BUK9 544 aa17.23■□□□□ 0.35
HMGCL-208ENST00000509389 FDX1P10109 184 aa17.23■□□□□ 0.35
HMGCL-208ENST00000509389 STAT2P52630 851 aa17.23■□□□□ 0.35
HMGCL-208ENST00000509389 C9orf50Q5SZB4 431 aa17.23■□□□□ 0.35
HMGCL-208ENST00000509389 VPS53Q5VIR6 699 aa17.23■□□□□ 0.35
HMGCL-208ENST00000509389 FAM109BQ6ICB4 259 aaPredicted RBP17.23■□□□□ 0.35
HMGCL-208ENST00000509389 KLHDC9Q8NEP7 349 aa17.23■□□□□ 0.35
HMGCL-208ENST00000509389 STAG1Q8WVM7 1258 aa17.23■□□□□ 0.35
HMGCL-208ENST00000509389 CHMP4CQ96CF2 233 aa17.23■□□□□ 0.35
HMGCL-208ENST00000509389 IL17RBQ9NRM6 502 aa17.23■□□□□ 0.35
HMGCL-208ENST00000509389 HOMER2Q9NSB8 354 aa17.23■□□□□ 0.35
HMGCL-208ENST00000509389 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.23■□□□□ 0.35
HMGCL-208ENST00000509389 ISY1Q9ULR0 285 aaKnown RBP17.23■□□□□ 0.35
HMGCL-208ENST00000509389 TACC3Q9Y6A5 838 aa17.23■□□□□ 0.35
HMGCL-208ENST00000509389 TSPY2A6NKD2 308 aa17.22■□□□□ 0.35
HMGCL-208ENST00000509389 CLTBP09497 229 aa17.22■□□□□ 0.35
HMGCL-208ENST00000509389 MCCP23508 829 aa17.22■□□□□ 0.35
HMGCL-208ENST00000509389 ITGB8P26012 769 aa17.22■□□□□ 0.35
HMGCL-208ENST00000509389 SLC1A4P43007 532 aa17.22■□□□□ 0.35
HMGCL-208ENST00000509389 ACLYP53396 1101 aa17.22■□□□□ 0.35
HMGCL-208ENST00000509389 ACVR2BQ13705 512 aa17.22■□□□□ 0.35
HMGCL-208ENST00000509389 PPP4R3BQ5MIZ7 849 aa17.22■□□□□ 0.35
HMGCL-208ENST00000509389 FAM160B2Q86V87 743 aa17.22■□□□□ 0.35
HMGCL-208ENST00000509389 CHURC1Q8WUH1 139 aa17.22■□□□□ 0.35
HMGCL-208ENST00000509389 STX8Q9UNK0 236 aa17.22■□□□□ 0.35
HMGCL-208ENST00000509389 ZNF536O15090 1300 aa17.21■□□□□ 0.35
HMGCL-208ENST00000509389 MYADML2A6NDP7 307 aa17.21■□□□□ 0.35
HMGCL-208ENST00000509389 TRIM6-TRIM34B2RNG4 842 aa17.21■□□□□ 0.35
HMGCL-208ENST00000509389 EPB41L2O43491 1005 aaKnown RBP17.21■□□□□ 0.35
HMGCL-208ENST00000509389 NMT2O60551 498 aa17.21■□□□□ 0.35
HMGCL-208ENST00000509389 PQBP1O60828 265 aaKnown RBP17.21■□□□□ 0.35
HMGCL-208ENST00000509389 DUSP11O75319 330 aaKnown RBP17.21■□□□□ 0.35
HMGCL-208ENST00000509389 IKQ13123 557 aaPredicted RBP17.21■□□□□ 0.35
HMGCL-208ENST00000509389 KCNA10Q16322 511 aa17.21■□□□□ 0.35
HMGCL-208ENST00000509389 CCSAPQ6IQ19 270 aaPredicted RBP17.21■□□□□ 0.35
HMGCL-208ENST00000509389 ARMCX2Q7L311 632 aa17.21■□□□□ 0.35
HMGCL-208ENST00000509389 AGBL1Q96MI9 1066 aa17.21■□□□□ 0.35
HMGCL-208ENST00000509389 TBC1D32Q96NH3 1257 aa17.21■□□□□ 0.35
HMGCL-208ENST00000509389 ABHD16BQ9H3Z7 469 aa17.21■□□□□ 0.35
HMGCL-208ENST00000509389 ACAD9Q9H845 621 aa17.21■□□□□ 0.35
HMGCL-208ENST00000509389 ANAPC4Q9UJX5 808 aa17.21■□□□□ 0.35
HMGCL-208ENST00000509389 MOXD2PA6NHM9 499 aa17.2■□□□□ 0.34
HMGCL-208ENST00000509389 KIAA0355O15063 1070 aa17.2■□□□□ 0.34
HMGCL-208ENST00000509389 ADCY6O43306 1168 aa17.2■□□□□ 0.34
HMGCL-208ENST00000509389 PLA2G6O60733 806 aa17.2■□□□□ 0.34
HMGCL-208ENST00000509389 IRX5P78411 483 aaPredicted RBP17.2■□□□□ 0.34
HMGCL-208ENST00000509389 CNTN2Q02246 1040 aa17.2■□□□□ 0.34
HMGCL-208ENST00000509389 CCDC144BQ3MJ40 725 aa17.2■□□□□ 0.34
HMGCL-208ENST00000509389 RCSD1Q6JBY9 416 aa17.2■□□□□ 0.34
HMGCL-208ENST00000509389 KCTD1Q719H9 257 aa17.2■□□□□ 0.34
HMGCL-208ENST00000509389 NUP133Q8WUM0 1156 aa17.2■□□□□ 0.34
HMGCL-208ENST00000509389 ESYT1Q9BSJ8 1104 aa17.2■□□□□ 0.34
HMGCL-208ENST00000509389 STARD7Q9NQZ5 370 aa17.2■□□□□ 0.34
HMGCL-208ENST00000509389 HELLSQ9NRZ9 838 aa17.2■□□□□ 0.34
HMGCL-208ENST00000509389 RNF146Q9NTX7 359 aa17.2■□□□□ 0.34
HMGCL-208ENST00000509389 RAD50Q92878 1312 aa17.19■□□□□ 0.34
HMGCL-208ENST00000509389 ORC4O43929 436 aa17.19■□□□□ 0.34
HMGCL-208ENST00000509389 RANBP6O60518 1105 aaKnown RBP17.19■□□□□ 0.34
HMGCL-208ENST00000509389 CST5P28325 142 aaPredicted RBP17.19■□□□□ 0.34
HMGCL-208ENST00000509389 NOVP48745 357 aa17.19■□□□□ 0.34
HMGCL-208ENST00000509389 ALX1Q15699 326 aa17.19■□□□□ 0.34
HMGCL-208ENST00000509389 CASC1Q6TDU7 716 aa17.19■□□□□ 0.34
HMGCL-208ENST00000509389 RASGRP2Q7LDG7 609 aa17.19■□□□□ 0.34
HMGCL-208ENST00000509389 ANKRD33Q7Z3H0 272 aa17.19■□□□□ 0.34
HMGCL-208ENST00000509389 CCDC144CPQ8IYA2 1237 aa17.19■□□□□ 0.34
HMGCL-208ENST00000509389 FAM133AQ8N9E0 248 aa17.19■□□□□ 0.34
HMGCL-208ENST00000509389 RILPL2Q969X0 211 aa17.19■□□□□ 0.34
HMGCL-208ENST00000509389 GUCD1Q96NT3 240 aa17.19■□□□□ 0.34
HMGCL-208ENST00000509389 KATNBL1Q9H079 304 aa17.19■□□□□ 0.34
HMGCL-208ENST00000509389 A1CFQ9NQ94 594 aaKnown RBP17.19■□□□□ 0.34
HMGCL-208ENST00000509389 SOWAHBA6NEL2 793 aa17.18■□□□□ 0.34
HMGCL-208ENST00000509389 FGRP09769 529 aa17.18■□□□□ 0.34
HMGCL-208ENST00000509389 C6orf222P0C671 652 aaPredicted RBP17.18■□□□□ 0.34
HMGCL-208ENST00000509389 RAG1P15918 1043 aa17.18■□□□□ 0.34
HMGCL-208ENST00000509389 RBM25P49756 843 aaKnown RBP17.18■□□□□ 0.34
HMGCL-208ENST00000509389 GJA9P57773 515 aa17.18■□□□□ 0.34
HMGCL-208ENST00000509389 SNAP25P60880 206 aa17.18■□□□□ 0.34
HMGCL-208ENST00000509389 FAAP100Q0VG06 881 aa17.18■□□□□ 0.34
HMGCL-208ENST00000509389 TKFCQ3LXA3 575 aa17.18■□□□□ 0.34
HMGCL-208ENST00000509389 CCDC174Q6PII3 467 aa17.18■□□□□ 0.34
HMGCL-208ENST00000509389 FAM227BQ96M60 508 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms