RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 USP17L18D6R9N7 530 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 USP17L22D6RA61 530 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 USP17L17D6RBQ6 530 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 USP17L19D6RCP7 530 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 USP17L20D6RJB6 530 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 CDC45O75419 566 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 IGHA2P01877 340 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 NEFLP07196 543 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 SSTR3P32745 418 aaPredicted RBP8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 PSMC4P43686 418 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 USP14P54578 494 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 ERVK-9P63128 1117 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 ERVK-24P63145 666 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 IRX3P78415 501 aaPredicted RBP8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 USP17L24Q0WX57 530 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 TRIM32Q13049 653 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 TMEM132BQ14DG7 1078 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 SEC23AQ15436 765 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 RRP12Q5JTH9 1297 aaKnown RBP8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 FBXO46Q6PJ61 603 aaPredicted RBP8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 AMOTL1Q8IY63 956 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 GMCL1P1Q8NEA9 526 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 SMCR8Q8TEV9 937 aaPredicted RBP8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 USP6NLQ92738 828 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 ERO1AQ96HE7 468 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 TMEM47Q9BQJ4 181 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 PAGR1Q9BTK6 254 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 CPVLQ9H3G5 476 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 MKNK2Q9HBH9 465 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 CLIP2Q9UDT6 1046 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 GJD2Q9UKL4 321 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 ZNF214Q9UL59 606 aaPredicted RBP8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 ZNF536O15090 1300 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 MYPNQ86TC9 1320 aa8.53□□□□□ -1.04
TOPBP1-207ENST00000509162 TSPY2A6NKD2 308 aa8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 F5H6K3 240 aa8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 SLC27A2O14975 620 aa8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 RANBP6O60518 1105 aaKnown RBP8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 KDM4AO75164 1064 aa8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 TTLL1O95922 423 aa8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 TSPY3P0CV98 308 aa8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 TSPY8P0CW00 308 aa8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 SNHG28P0DPA3 235 aa8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 SNAP25P60880 206 aa8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 MDM2Q00987 491 aaPredicted RBP8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 PDE4BQ07343 736 aa8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 KLRC3Q07444 240 aa8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 NECTIN1Q15223 517 aa8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 TTBK2Q6IQ55 1244 aa8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 ENAHQ8N8S7 591 aaPredicted RBP8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 TTC13Q8NBP0 860 aa8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 SH3TC2Q8TF17 1288 aa8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 LPAR1Q92633 364 aa8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 ARMC5Q96C12 935 aa8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 SHISA4Q96DD7 197 aa8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 FGD4Q96M96 766 aa8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 MOV10L1Q9BXT6 1211 aaKnown RBP8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 TANGO6Q9C0B7 1094 aa8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 ARHGEF10LQ9HCE6 1279 aa8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 FAM217BQ9NTX9 383 aaPredicted RBP8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 TCP11L1Q9NUJ3 509 aa8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 SRRDQ9UH36 339 aa8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 PNMA3Q9UL41 463 aa8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 PPP1R9AQ9ULJ8 1098 aa8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 RIPK3Q9Y572 518 aa8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 TNKSO95271 1327 aa8.52□□□□□ -1.05
TOPBP1-207ENST00000509162 E7EWF7 191 aa8.51□□□□□ -1.05
TOPBP1-207ENST00000509162 FLOT1O75955 427 aa8.51□□□□□ -1.05
TOPBP1-207ENST00000509162 PDHBP11177 359 aa8.51□□□□□ -1.05
TOPBP1-207ENST00000509162 ELNP15502 786 aa8.51□□□□□ -1.05
TOPBP1-207ENST00000509162 GCLCP48506 637 aaPredicted RBP8.51□□□□□ -1.05
TOPBP1-207ENST00000509162 FLT3LGP49771 235 aa8.51□□□□□ -1.05
TOPBP1-207ENST00000509162 SOX10P56693 466 aa8.51□□□□□ -1.05
TOPBP1-207ENST00000509162 MTFR1Q15390 333 aa8.51□□□□□ -1.05
TOPBP1-207ENST00000509162 CCL14Q16627 93 aa8.51□□□□□ -1.05
TOPBP1-207ENST00000509162 MORN1Q5T089 497 aa8.51□□□□□ -1.05
TOPBP1-207ENST00000509162 ERICH6BQ5W0A0 696 aa8.51□□□□□ -1.05
TOPBP1-207ENST00000509162 CREB3L3Q68CJ9 461 aa8.51□□□□□ -1.05
TOPBP1-207ENST00000509162 SLFN13Q68D06 897 aa8.51□□□□□ -1.05
TOPBP1-207ENST00000509162 KCTD1Q719H9 257 aa8.51□□□□□ -1.05
TOPBP1-207ENST00000509162 ZNF444Q8N0Y2 327 aaPredicted RBP8.51□□□□□ -1.05
TOPBP1-207ENST00000509162 TRIB2Q92519 343 aa8.51□□□□□ -1.05
TOPBP1-207ENST00000509162 GMCL1Q96IK5 515 aa8.51□□□□□ -1.05
TOPBP1-207ENST00000509162 ZNF333Q96JL9 665 aa8.51□□□□□ -1.05
TOPBP1-207ENST00000509162 FLRT1Q9NZU1 646 aa8.51□□□□□ -1.05
TOPBP1-207ENST00000509162 ASTN1O14525 1302 aa8.51□□□□□ -1.05
TOPBP1-207ENST00000509162 FRMPD2Q68DX3 1309 aaPredicted RBP8.51□□□□□ -1.05
TOPBP1-207ENST00000509162 VWA5AO00534 786 aa8.5□□□□□ -1.05
TOPBP1-207ENST00000509162 ZNF213O14771 459 aa8.5□□□□□ -1.05
TOPBP1-207ENST00000509162 TNPO2O14787 897 aaKnown RBP8.5□□□□□ -1.05
TOPBP1-207ENST00000509162 MCCP23508 829 aa8.5□□□□□ -1.05
TOPBP1-207ENST00000509162 MFAP1P55081 439 aaKnown RBP8.5□□□□□ -1.05
TOPBP1-207ENST00000509162 GRB14Q14449 540 aa8.5□□□□□ -1.05
TOPBP1-207ENST00000509162 ADCK5Q3MIX3 580 aa8.5□□□□□ -1.05
TOPBP1-207ENST00000509162 CHST3Q7LGC8 479 aa8.5□□□□□ -1.05
TOPBP1-207ENST00000509162 GPR142Q7Z601 462 aa8.5□□□□□ -1.05
TOPBP1-207ENST00000509162 METTL3Q86U44 580 aaKnown RBP8.5□□□□□ -1.05
TOPBP1-207ENST00000509162 ANKS1AQ92625 1134 aa8.5□□□□□ -1.05
TOPBP1-207ENST00000509162 KCNB2Q92953 911 aa8.5□□□□□ -1.05
TOPBP1-207ENST00000509162 LRCH3Q96II8 777 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms