RNA–Protein interactions for RNA: ENST00000509093.5

COPS4-206, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2 BASIC

Gene COPS4, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-206ENST00000509093 SLC26A6Q9BXS9 759 aa12.65□□□□□ -0.38
COPS4-206ENST00000509093 DEF6Q9H4E7 631 aa12.65□□□□□ -0.38
COPS4-206ENST00000509093 MYH1P12882 1939 aa12.65□□□□□ -0.38
COPS4-206ENST00000509093 LOC102724159A0A0B4J2E5 919 aa12.65□□□□□ -0.38
COPS4-206ENST00000509093 STX10O60499 249 aa12.65□□□□□ -0.38
COPS4-206ENST00000509093 VIL1P09327 827 aaKnown RBP12.65□□□□□ -0.38
COPS4-206ENST00000509093 TUBB4BP68371 445 aa12.65□□□□□ -0.38
COPS4-206ENST00000509093 MCM6Q14566 821 aa12.65□□□□□ -0.38
COPS4-206ENST00000509093 PWP2Q15269 919 aaKnown RBP12.65□□□□□ -0.38
COPS4-206ENST00000509093 SF3A1Q15459 793 aaKnown RBP12.65□□□□□ -0.38
COPS4-206ENST00000509093 RSBN1LQ6PCB5 846 aaPredicted RBP12.65□□□□□ -0.38
COPS4-206ENST00000509093 FAM71BQ8TC56 605 aa12.65□□□□□ -0.38
COPS4-206ENST00000509093 C8orf76Q96K31 380 aa12.65□□□□□ -0.38
COPS4-206ENST00000509093 PRMT6Q96LA8 375 aaPredicted RBP12.65□□□□□ -0.38
COPS4-206ENST00000509093 ALG1Q9BT22 464 aa12.65□□□□□ -0.38
COPS4-206ENST00000509093 TDRD3Q9H7E2 651 aaKnown RBP12.65□□□□□ -0.38
COPS4-206ENST00000509093 ANKZF1Q9H8Y5 726 aa12.65□□□□□ -0.38
COPS4-206ENST00000509093 POLR3EQ9NVU0 708 aa12.65□□□□□ -0.38
COPS4-206ENST00000509093 FAM198AQ9UFP1 575 aa12.65□□□□□ -0.38
COPS4-206ENST00000509093 SERPINA10Q9UK55 444 aa12.65□□□□□ -0.38
COPS4-206ENST00000509093 FAN1Q9Y2M0 1017 aa12.65□□□□□ -0.38
COPS4-206ENST00000509093 CD2APQ9Y5K6 639 aa12.65□□□□□ -0.38
COPS4-206ENST00000509093 FOCADQ5VW36 1801 aa12.65□□□□□ -0.38
COPS4-206ENST00000509093 ZNF202O95125 648 aa12.64□□□□□ -0.39
COPS4-206ENST00000509093 PLEKHA8P1O95397 391 aa12.64□□□□□ -0.39
COPS4-206ENST00000509093 TSPY3P0CV98 308 aa12.64□□□□□ -0.39
COPS4-206ENST00000509093 TSPY8P0CW00 308 aa12.64□□□□□ -0.39
COPS4-206ENST00000509093 HDLBPQ00341 1268 aaKnown RBP12.64□□□□□ -0.39
COPS4-206ENST00000509093 GABPAQ06546 454 aa12.64□□□□□ -0.39
COPS4-206ENST00000509093 CATIPQ7Z7H3 387 aa12.64□□□□□ -0.39
COPS4-206ENST00000509093 EFCAB13Q8IY85 973 aa12.64□□□□□ -0.39
COPS4-206ENST00000509093 GMLQ99445 158 aa12.64□□□□□ -0.39
COPS4-206ENST00000509093 L1RE1Q9UN81 338 aa12.64□□□□□ -0.39
COPS4-206ENST00000509093 hCG_1642624A0A1W2PR95 340 aa12.64□□□□□ -0.39
COPS4-206ENST00000509093 CUTAO60888 179 aa12.64□□□□□ -0.39
COPS4-206ENST00000509093 CDKL5O76039 1030 aa12.64□□□□□ -0.39
COPS4-206ENST00000509093 FMNL1O95466 1100 aaPredicted RBP12.64□□□□□ -0.39
COPS4-206ENST00000509093 IFNAR1P17181 557 aa12.64□□□□□ -0.39
COPS4-206ENST00000509093 PRELPP51888 382 aa12.64□□□□□ -0.39
COPS4-206ENST00000509093 RASSF7Q02833 373 aa12.64□□□□□ -0.39
COPS4-206ENST00000509093 SSRP1Q08945 709 aaKnown RBP12.64□□□□□ -0.39
COPS4-206ENST00000509093 GOLGA8FQ08AF8 430 aa12.64□□□□□ -0.39
COPS4-206ENST00000509093 GOLGA8DPQ0D2H9 430 aa12.64□□□□□ -0.39
COPS4-206ENST00000509093 TBX2Q13207 712 aaPredicted RBP12.64□□□□□ -0.39
COPS4-206ENST00000509093 SOGA3Q5TF21 947 aa12.64□□□□□ -0.39
COPS4-206ENST00000509093 SH3BP5LQ7L8J4 393 aa12.64□□□□□ -0.39
COPS4-206ENST00000509093 NIM1KQ8IY84 436 aa12.64□□□□□ -0.39
COPS4-206ENST00000509093 CRACR2BQ8N4Y2 399 aaPredicted RBP12.64□□□□□ -0.39
COPS4-206ENST00000509093 CEP112Q8N8E3 955 aa12.64□□□□□ -0.39
COPS4-206ENST00000509093 CCDC12Q8WUD4 166 aaPredicted RBP12.64□□□□□ -0.39
COPS4-206ENST00000509093 DRC1Q96MC2 740 aa12.64□□□□□ -0.39
COPS4-206ENST00000509093 TAOK3Q9H2K8 898 aa12.64□□□□□ -0.39
COPS4-206ENST00000509093 TUBE1Q9UJT0 475 aa12.64□□□□□ -0.39
COPS4-206ENST00000509093 ZNRF3Q9ULT6 936 aa12.64□□□□□ -0.39
COPS4-206ENST00000509093 BRCA1P38398 1863 aaKnown RBP12.64□□□□□ -0.39
COPS4-206ENST00000509093 SHTN1A0MZ66 631 aa12.63□□□□□ -0.39
COPS4-206ENST00000509093 DDTLA6NHG4 134 aaPredicted RBP12.63□□□□□ -0.39
COPS4-206ENST00000509093 KIF28PB7ZC32 967 aa12.63□□□□□ -0.39
COPS4-206ENST00000509093 TMEM232C9JQI7 657 aa12.63□□□□□ -0.39
COPS4-206ENST00000509093 SPTLC2O15270 562 aa12.63□□□□□ -0.39
COPS4-206ENST00000509093 CXCL9Q07325 125 aa12.63□□□□□ -0.39
COPS4-206ENST00000509093 CPLX2Q6PUV4 134 aaKnown RBP12.63□□□□□ -0.39
COPS4-206ENST00000509093 LRRC31Q6UY01 552 aa12.63□□□□□ -0.39
COPS4-206ENST00000509093 TOGARAM2Q6ZUX3 1019 aa12.63□□□□□ -0.39
COPS4-206ENST00000509093 RASGRP2Q7LDG7 609 aa12.63□□□□□ -0.39
COPS4-206ENST00000509093 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.63□□□□□ -0.39
COPS4-206ENST00000509093 FAM196BA6NMK8 535 aa12.63□□□□□ -0.39
COPS4-206ENST00000509093 FUT2Q10981 343 aa12.63□□□□□ -0.39
COPS4-206ENST00000509093 HSP90B2PQ58FF3 399 aa12.63□□□□□ -0.39
COPS4-206ENST00000509093 SWT1Q5T5J6 900 aaKnown RBP12.63□□□□□ -0.39
COPS4-206ENST00000509093 MMS22LQ6ZRQ5 1243 aa12.63□□□□□ -0.39
COPS4-206ENST00000509093 GBP3Q9H0R5 595 aa12.63□□□□□ -0.39
COPS4-206ENST00000509093 N4BP1O75113 896 aaKnown RBP12.62□□□□□ -0.39
COPS4-206ENST00000509093 AKR1B1P15121 316 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 PFKFB1P16118 471 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 CMA1P23946 247 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 PSEN1P49768 467 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 RCAN1P53805 252 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 TUBB2AQ13885 445 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 KRT40Q6A162 431 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 CLEC10AQ8IUN9 316 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 NEDD1Q8NHV4 660 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 ANKS1AQ92625 1134 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 SECISBP2LQ93073 1101 aaKnown RBP12.62□□□□□ -0.39
COPS4-206ENST00000509093 SHISA4Q96DD7 197 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 PNKPQ96T60 521 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 TUBB2BQ9BVA1 445 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 ACBD3Q9H3P7 528 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 MED4Q9NPJ6 270 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 TCP11L1Q9NUJ3 509 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 INTS13Q9NVM9 706 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 MTMR7Q9Y216 660 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 CLIC4Q9Y696 253 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 PPFIA4O75335 1185 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 DDAH1O94760 285 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 SHMT1P34896 483 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 SHROOM1Q2M3G4 852 aaPredicted RBP12.62□□□□□ -0.39
COPS4-206ENST00000509093 MCTP2Q6DN12 878 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 DGKHQ86XP1 1220 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 SRBD1Q8N5C6 995 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms