RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 TOP1P11387 765 aaKnown RBP17.45■□□□□ 0.38
UBE2D3-228ENST00000508974 COL6A1P12109 1028 aa17.45■□□□□ 0.38
UBE2D3-228ENST00000508974 ALAS1P13196 640 aa17.45■□□□□ 0.38
UBE2D3-228ENST00000508974 TTBK2Q6IQ55 1244 aa17.45■□□□□ 0.38
UBE2D3-228ENST00000508974 LENG1Q96BZ8 264 aaPredicted RBP17.45■□□□□ 0.38
UBE2D3-228ENST00000508974 ZNF536O15090 1300 aa17.45■□□□□ 0.38
UBE2D3-228ENST00000508974 KDM4AO75164 1064 aa17.44■□□□□ 0.38
UBE2D3-228ENST00000508974 NOVP48745 357 aa17.44■□□□□ 0.38
UBE2D3-228ENST00000508974 ATN1P54259 1190 aaPredicted RBP17.44■□□□□ 0.38
UBE2D3-228ENST00000508974 OAZ1P54368 228 aa17.44■□□□□ 0.38
UBE2D3-228ENST00000508974 LRRC26Q2I0M4 334 aa17.44■□□□□ 0.38
UBE2D3-228ENST00000508974 DCAF4Q8WV16 495 aa17.44■□□□□ 0.38
UBE2D3-228ENST00000508974 ESR2Q92731 530 aa17.44■□□□□ 0.38
UBE2D3-228ENST00000508974 DSCC1Q9BVC3 393 aa17.44■□□□□ 0.38
UBE2D3-228ENST00000508974 RNF146Q9NTX7 359 aa17.44■□□□□ 0.38
UBE2D3-228ENST00000508974 TCP11L1Q9NUJ3 509 aa17.44■□□□□ 0.38
UBE2D3-228ENST00000508974 RBM27Q9P2N5 1060 aaKnown RBP17.44■□□□□ 0.38
UBE2D3-228ENST00000508974 DIS3Q9Y2L1 958 aaKnown RBP17.44■□□□□ 0.38
UBE2D3-228ENST00000508974 B4E1Z4 1266 aa17.43■□□□□ 0.38
UBE2D3-228ENST00000508974 IMMTQ16891 758 aaKnown RBP17.43■□□□□ 0.38
UBE2D3-228ENST00000508974 CHST13Q8NET6 341 aa17.43■□□□□ 0.38
UBE2D3-228ENST00000508974 ACAD9Q9H845 621 aa17.43■□□□□ 0.38
UBE2D3-228ENST00000508974 FBXO40Q9UH90 709 aa17.43■□□□□ 0.38
UBE2D3-228ENST00000508974 ZHX1Q9UKY1 873 aaPredicted RBP17.43■□□□□ 0.38
UBE2D3-228ENST00000508974 CNPY2Q9Y2B0 182 aa17.43■□□□□ 0.38
UBE2D3-228ENST00000508974 LCTP09848 1927 aa17.43■□□□□ 0.38
UBE2D3-228ENST00000508974 TRIOBPQ9H2D6 2365 aa17.42■□□□□ 0.38
UBE2D3-228ENST00000508974 DNAJC25-GNG10A0A024R161 153 aa17.42■□□□□ 0.38
UBE2D3-228ENST00000508974 KBTBD13C9JR72 458 aa17.42■□□□□ 0.38
UBE2D3-228ENST00000508974 DNM1LO00429 736 aa17.42■□□□□ 0.38
UBE2D3-228ENST00000508974 FDX1P10109 184 aa17.42■□□□□ 0.38
UBE2D3-228ENST00000508974 PCP11498 1178 aaKnown RBP17.42■□□□□ 0.38
UBE2D3-228ENST00000508974 CNTN2Q02246 1040 aa17.42■□□□□ 0.38
UBE2D3-228ENST00000508974 MUM1L1Q5H9M0 696 aa17.42■□□□□ 0.38
UBE2D3-228ENST00000508974 ARRDC4Q8NCT1 418 aa17.42■□□□□ 0.38
UBE2D3-228ENST00000508974 TRERF1Q96PN7 1200 aa17.42■□□□□ 0.38
UBE2D3-228ENST00000508974 CCPG1Q9ULG6 757 aa17.42■□□□□ 0.38
UBE2D3-228ENST00000508974 RANBP2P49792 3224 aaKnown RBP17.42■□□□□ 0.38
UBE2D3-228ENST00000508974 PLA2G6O60733 806 aa17.41■□□□□ 0.38
UBE2D3-228ENST00000508974 ZNF865P0CJ78 1059 aaPredicted RBP17.41■□□□□ 0.38
UBE2D3-228ENST00000508974 GOLGA8HP0CJ92 632 aa17.41■□□□□ 0.38
UBE2D3-228ENST00000508974 RARBP10826 455 aa17.41■□□□□ 0.38
UBE2D3-228ENST00000508974 PDHBP11177 359 aa17.41■□□□□ 0.38
UBE2D3-228ENST00000508974 SYDE2Q5VT97 1194 aa17.41■□□□□ 0.38
UBE2D3-228ENST00000508974 FERMT2Q96AC1 680 aa17.41■□□□□ 0.38
UBE2D3-228ENST00000508974 FGD4Q96M96 766 aa17.41■□□□□ 0.38
UBE2D3-228ENST00000508974 A1CFQ9NQ94 594 aaKnown RBP17.41■□□□□ 0.38
UBE2D3-228ENST00000508974 XPNPEP3Q9NQH7 507 aa17.41■□□□□ 0.38
UBE2D3-228ENST00000508974 CTNNA3Q9UI47 895 aa17.41■□□□□ 0.38
UBE2D3-228ENST00000508974 LRRC37A2A6NM11 1700 aa17.41■□□□□ 0.38
UBE2D3-228ENST00000508974 POTEB2H3BUK9 544 aa17.4■□□□□ 0.38
UBE2D3-228ENST00000508974 SNAI1O95863 264 aaPredicted RBP17.4■□□□□ 0.38
UBE2D3-228ENST00000508974 PGK1P00558 417 aa17.4■□□□□ 0.38
UBE2D3-228ENST00000508974 CHMLP26374 656 aa17.4■□□□□ 0.38
UBE2D3-228ENST00000508974 LRRC41Q15345 812 aa17.4■□□□□ 0.38
UBE2D3-228ENST00000508974 NSMFQ6X4W1 530 aa17.4■□□□□ 0.38
UBE2D3-228ENST00000508974 SKAP1Q86WV1 359 aa17.4■□□□□ 0.38
UBE2D3-228ENST00000508974 IQCA1Q86XH1 822 aa17.4■□□□□ 0.38
UBE2D3-228ENST00000508974 CPVLQ9H3G5 476 aa17.4■□□□□ 0.38
UBE2D3-228ENST00000508974 DDX49Q9Y6V7 483 aaKnown RBP17.4■□□□□ 0.38
UBE2D3-228ENST00000508974 MYH6P13533 1939 aa17.39■□□□□ 0.37
UBE2D3-228ENST00000508974 AKR1A1P14550 325 aa17.39■□□□□ 0.37
UBE2D3-228ENST00000508974 ADCYAP1R1P41586 468 aa17.39■□□□□ 0.37
UBE2D3-228ENST00000508974 FXR1P51114 621 aaKnown RBP eCLIP17.39■□□□□ 0.37
UBE2D3-228ENST00000508974 PTH1RQ03431 593 aa17.39■□□□□ 0.37
UBE2D3-228ENST00000508974 ZNF543Q08ER8 600 aa17.39■□□□□ 0.37
UBE2D3-228ENST00000508974 RUFY2Q8WXA3 655 aa17.39■□□□□ 0.37
UBE2D3-228ENST00000508974 TTC14Q96N46 770 aa17.39■□□□□ 0.37
UBE2D3-228ENST00000508974 RANBP17Q9H2T7 1088 aaKnown RBP17.39■□□□□ 0.37
UBE2D3-228ENST00000508974 KAT14Q9H8E8 782 aa17.39■□□□□ 0.37
UBE2D3-228ENST00000508974 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.39■□□□□ 0.37
UBE2D3-228ENST00000508974 ZSWIM5Q9P217 1185 aa17.39■□□□□ 0.37
UBE2D3-228ENST00000508974 NRBP1Q9UHY1 535 aa17.39■□□□□ 0.37
UBE2D3-228ENST00000508974 ATP11BQ9Y2G3 1177 aa17.39■□□□□ 0.37
UBE2D3-228ENST00000508974 TNKSO95271 1327 aa17.39■□□□□ 0.37
UBE2D3-228ENST00000508974 RAD50Q92878 1312 aa17.39■□□□□ 0.37
UBE2D3-228ENST00000508974 SYNGAP1Q96PV0 1343 aa17.39■□□□□ 0.37
UBE2D3-228ENST00000508974 ICAM1P05362 532 aa17.38■□□□□ 0.37
UBE2D3-228ENST00000508974 TKFCQ3LXA3 575 aa17.38■□□□□ 0.37
UBE2D3-228ENST00000508974 MAMDC4Q6UXC1 1216 aa17.38■□□□□ 0.37
UBE2D3-228ENST00000508974 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.38■□□□□ 0.37
UBE2D3-228ENST00000508974 ARMCX2Q7L311 632 aa17.38■□□□□ 0.37
UBE2D3-228ENST00000508974 CCDC144CPQ8IYA2 1237 aa17.38■□□□□ 0.37
UBE2D3-228ENST00000508974 MSL3Q8N5Y2 521 aaKnown RBP17.38■□□□□ 0.37
UBE2D3-228ENST00000508974 PNMA1Q8ND90 353 aa17.38■□□□□ 0.37
UBE2D3-228ENST00000508974 PURBQ96QR8 312 aaKnown RBP17.38■□□□□ 0.37
UBE2D3-228ENST00000508974 ZSCAN10Q96SZ4 725 aaPredicted RBP17.38■□□□□ 0.37
UBE2D3-228ENST00000508974 SOWAHBA6NEL2 793 aa17.37■□□□□ 0.37
UBE2D3-228ENST00000508974 RTP1P59025 263 aa17.37■□□□□ 0.37
UBE2D3-228ENST00000508974 ACVR2BQ13705 512 aa17.37■□□□□ 0.37
UBE2D3-228ENST00000508974 BTNL9Q6UXG8 535 aa17.37■□□□□ 0.37
UBE2D3-228ENST00000508974 ZNF467Q7Z7K2 595 aaPredicted RBP17.37■□□□□ 0.37
UBE2D3-228ENST00000508974 DGKHQ86XP1 1220 aa17.37■□□□□ 0.37
UBE2D3-228ENST00000508974 ENAHQ8N8S7 591 aaPredicted RBP17.37■□□□□ 0.37
UBE2D3-228ENST00000508974 FAM133AQ8N9E0 248 aa17.37■□□□□ 0.37
UBE2D3-228ENST00000508974 UBAC1Q9BSL1 405 aa17.37■□□□□ 0.37
UBE2D3-228ENST00000508974 KRT23Q9C075 422 aa17.37■□□□□ 0.37
UBE2D3-228ENST00000508974 UBA5Q9GZZ9 404 aa17.37■□□□□ 0.37
UBE2D3-228ENST00000508974 PRO3102Q9H379 93 aa17.37■□□□□ 0.37
UBE2D3-228ENST00000508974 FAM184BQ9ULE4 1060 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms