RNA–Protein interactions for RNA: ENST00000508854.1

SH3D21-206, Transcript of SH3 domain containing 21, humanhuman

TSL 5

Gene SH3D21, Length 1,134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-206ENST00000508854 SLC3A2P08195 630 aaKnown RBP11.94□□□□□ -0.5
SH3D21-206ENST00000508854 NKX3-2P78367 333 aa11.94□□□□□ -0.5
SH3D21-206ENST00000508854 RAB30Q15771 203 aa11.94□□□□□ -0.5
SH3D21-206ENST00000508854 CCDC144BQ3MJ40 725 aa11.94□□□□□ -0.5
SH3D21-206ENST00000508854 GMCL1P1Q8NEA9 526 aa11.94□□□□□ -0.5
SH3D21-206ENST00000508854 ATXN2LQ8WWM7 1075 aaKnown RBP11.94□□□□□ -0.5
SH3D21-206ENST00000508854 APPBP2Q92624 585 aa11.94□□□□□ -0.5
SH3D21-206ENST00000508854 LENG1Q96BZ8 264 aaPredicted RBP11.94□□□□□ -0.5
SH3D21-206ENST00000508854 NUP88Q99567 741 aaPredicted RBP11.94□□□□□ -0.5
SH3D21-206ENST00000508854 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.94□□□□□ -0.52e-11■■■□□ 17
SH3D21-206ENST00000508854 NACAP1Q9BZK3 213 aa11.94□□□□□ -0.5
SH3D21-206ENST00000508854 ECHDC1Q9NTX5 307 aa11.94□□□□□ -0.5
SH3D21-206ENST00000508854 MSRAQ9UJ68 235 aa11.94□□□□□ -0.5
SH3D21-206ENST00000508854 COG6Q9Y2V7 657 aa11.94□□□□□ -0.5
SH3D21-206ENST00000508854 RIPK3Q9Y572 518 aa11.94□□□□□ -0.5
SH3D21-206ENST00000508854 CDH23Q9H251 3354 aa11.93□□□□□ -0.5
SH3D21-206ENST00000508854 ASB14A6NK59 587 aa11.93□□□□□ -0.5
SH3D21-206ENST00000508854 GSG1L2A8MUP6 293 aa11.93□□□□□ -0.5
SH3D21-206ENST00000508854 SMIM22K7EJ46 135 aa11.93□□□□□ -0.5
SH3D21-206ENST00000508854 APPP05067 770 aa11.93□□□□□ -0.5
SH3D21-206ENST00000508854 TDO2P48775 406 aa11.93□□□□□ -0.5
SH3D21-206ENST00000508854 PDE4BQ07343 736 aa11.93□□□□□ -0.5
SH3D21-206ENST00000508854 TKFCQ3LXA3 575 aa11.93□□□□□ -0.5
SH3D21-206ENST00000508854 TMEM240Q5SV17 173 aa11.93□□□□□ -0.5
SH3D21-206ENST00000508854 AKNAD1Q5T1N1 836 aa11.93□□□□□ -0.5
SH3D21-206ENST00000508854 ARMCX2Q7L311 632 aa11.93□□□□□ -0.5
SH3D21-206ENST00000508854 FAM160B2Q86V87 743 aa11.93□□□□□ -0.5
SH3D21-206ENST00000508854 KBTBD3Q8NAB2 608 aa11.93□□□□□ -0.5
SH3D21-206ENST00000508854 CHURC1Q8WUH1 139 aa11.93□□□□□ -0.5
SH3D21-206ENST00000508854 RAVER2Q9HCJ3 691 aaKnown RBP11.93□□□□□ -0.5
SH3D21-206ENST00000508854 MTMR4Q9NYA4 1195 aa11.93□□□□□ -0.5
SH3D21-206ENST00000508854 SPTBN5Q9NRC6 3674 aaKnown RBP11.93□□□□□ -0.5
SH3D21-206ENST00000508854 IGKV6D-41A0A0C4DH26 115 aa11.92□□□□□ -0.5
SH3D21-206ENST00000508854 TNFRSF10AO00220 468 aa11.92□□□□□ -0.5
SH3D21-206ENST00000508854 RNF113AO15541 343 aaKnown RBP11.92□□□□□ -0.5
SH3D21-206ENST00000508854 TSPY3P0CV98 308 aa11.92□□□□□ -0.5
SH3D21-206ENST00000508854 TSPY8P0CW00 308 aa11.92□□□□□ -0.5
SH3D21-206ENST00000508854 BMP3P12645 472 aa11.92□□□□□ -0.5
SH3D21-206ENST00000508854 STAT2P52630 851 aa11.92□□□□□ -0.5
SH3D21-206ENST00000508854 TNFAIP2Q03169 654 aa11.92□□□□□ -0.5
SH3D21-206ENST00000508854 RASIP1Q5U651 963 aa11.92□□□□□ -0.5
SH3D21-206ENST00000508854 NOL8Q76FK4 1167 aaKnown RBP11.92□□□□□ -0.5
SH3D21-206ENST00000508854 FAM126BQ8IXS8 530 aa11.92□□□□□ -0.5
SH3D21-206ENST00000508854 CCDC144CPQ8IYA2 1237 aa11.92□□□□□ -0.5
SH3D21-206ENST00000508854 CEP95Q96GE4 821 aa11.92□□□□□ -0.5
SH3D21-206ENST00000508854 AP5M1Q9H0R1 490 aa11.92□□□□□ -0.5
SH3D21-206ENST00000508854 ACAD9Q9H845 621 aa11.92□□□□□ -0.5
SH3D21-206ENST00000508854 IL23AQ9NPF7 189 aa11.92□□□□□ -0.5
SH3D21-206ENST00000508854 GREB1LQ9C091 1923 aaPredicted RBP11.92□□□□□ -0.5
SH3D21-206ENST00000508854 MYADML2A6NDP7 307 aa11.91□□□□□ -0.5
SH3D21-206ENST00000508854 PATL2C9JE40 543 aaKnown RBP11.91□□□□□ -0.5
SH3D21-206ENST00000508854 FGBP02675 491 aa11.91□□□□□ -0.5
SH3D21-206ENST00000508854 CSF2RAP15509 400 aa11.91□□□□□ -0.5
SH3D21-206ENST00000508854 SLFN13Q68D06 897 aa11.91□□□□□ -0.5
SH3D21-206ENST00000508854 ZNF365Q70YC5 407 aa11.91□□□□□ -0.5
SH3D21-206ENST00000508854 RPUSD2Q8IZ73 545 aaKnown RBP11.91□□□□□ -0.5
SH3D21-206ENST00000508854 STK11IPQ8N1F8 1099 aa11.91□□□□□ -0.5
SH3D21-206ENST00000508854 IL27Q8NEV9 243 aa11.91□□□□□ -0.5
SH3D21-206ENST00000508854 HERVK_113Q902F9 699 aa11.91□□□□□ -0.5
SH3D21-206ENST00000508854 PBX4Q9BYU1 374 aa11.91□□□□□ -0.5
SH3D21-206ENST00000508854 TSPYL2Q9H2G4 693 aaPredicted RBP11.91□□□□□ -0.5
SH3D21-206ENST00000508854 ISY1Q9ULR0 285 aaKnown RBP11.91□□□□□ -0.5
SH3D21-206ENST00000508854 Q9Y3F1 56 aa11.91□□□□□ -0.5
SH3D21-206ENST00000508854 MYH4Q9Y623 1939 aa11.9□□□□□ -0.5
SH3D21-206ENST00000508854 TMEM232C9JQI7 657 aa11.9□□□□□ -0.5
SH3D21-206ENST00000508854 GPAA1O43292 621 aa11.9□□□□□ -0.5
SH3D21-206ENST00000508854 PLA2G6O60733 806 aa11.9□□□□□ -0.5
SH3D21-206ENST00000508854 CD4P01730 458 aa11.9□□□□□ -0.5
SH3D21-206ENST00000508854 CHGBP05060 677 aa11.9□□□□□ -0.5
SH3D21-206ENST00000508854 IKQ13123 557 aaPredicted RBP11.9□□□□□ -0.5
SH3D21-206ENST00000508854 IQSEC1Q6DN90 963 aa11.9□□□□□ -0.5
SH3D21-206ENST00000508854 C16orf59Q7L2K0 433 aa11.9□□□□□ -0.5
SH3D21-206ENST00000508854 FAM133AQ8N9E0 248 aa11.9□□□□□ -0.5
SH3D21-206ENST00000508854 SLC43A3Q8NBI5 491 aa11.9□□□□□ -0.5
SH3D21-206ENST00000508854 NEDD1Q8NHV4 660 aa11.9□□□□□ -0.5
SH3D21-206ENST00000508854 STAG1Q8WVM7 1258 aa11.9□□□□□ -0.5
SH3D21-206ENST00000508854 OSBP2Q969R2 916 aa11.9□□□□□ -0.5
SH3D21-206ENST00000508854 GMCL1Q96IK5 515 aa11.9□□□□□ -0.5
SH3D21-206ENST00000508854 PPP1R12CQ9BZL4 782 aa11.9□□□□□ -0.5
SH3D21-206ENST00000508854 HIPK3Q9H422 1215 aa11.9□□□□□ -0.5
SH3D21-206ENST00000508854 SLC28A3Q9HAS3 691 aa11.9□□□□□ -0.5
SH3D21-206ENST00000508854 THEGQ9P2T0 379 aa11.9□□□□□ -0.5
SH3D21-206ENST00000508854 SLC1A4P43007 532 aa11.89□□□□□ -0.51
SH3D21-206ENST00000508854 MRPS5P82675 430 aaKnown RBP11.89□□□□□ -0.51
SH3D21-206ENST00000508854 ITGA7Q13683 1181 aa11.89□□□□□ -0.51
SH3D21-206ENST00000508854 FSCN1Q16658 493 aaKnown RBP11.89□□□□□ -0.51
SH3D21-206ENST00000508854 IFNL3Q8IZI9 196 aa11.89□□□□□ -0.51
SH3D21-206ENST00000508854 LRRC47Q8N1G4 583 aaKnown RBP11.89□□□□□ -0.51
SH3D21-206ENST00000508854 FGD4Q96M96 766 aa11.89□□□□□ -0.51
SH3D21-206ENST00000508854 TRERF1Q96PN7 1200 aa11.89□□□□□ -0.51
SH3D21-206ENST00000508854 ASB2Q96Q27 587 aa11.89□□□□□ -0.51
SH3D21-206ENST00000508854 KATNBL1Q9H079 304 aa11.89□□□□□ -0.51
SH3D21-206ENST00000508854 PRDM12Q9H4Q4 367 aa11.89□□□□□ -0.51
SH3D21-206ENST00000508854 HOMER2Q9NSB8 354 aa11.89□□□□□ -0.51
SH3D21-206ENST00000508854 RNF146Q9NTX7 359 aa11.89□□□□□ -0.51
SH3D21-206ENST00000508854 TTC28Q96AY4 2481 aa11.89□□□□□ -0.51
SH3D21-206ENST00000508854 PLIN4Q96Q06 1357 aa11.89□□□□□ -0.51
SH3D21-206ENST00000508854 ERC2O15083 957 aa11.88□□□□□ -0.51
SH3D21-206ENST00000508854 ADCY6O43306 1168 aa11.88□□□□□ -0.51
SH3D21-206ENST00000508854 SMARCA5O60264 1052 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms