RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 ZBTB38Q8NAP3 1195 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P44-201ENST00000508597 FRAT1Q92837 279 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P44-201ENST00000508597 MYD88Q99836 296 aa6.87□□□□□ -1.31
HMGB1P44-201ENST00000508597 EHD4Q9H223 541 aa6.87□□□□□ -1.31
HMGB1P44-201ENST00000508597 ABCB6Q9NP58 842 aa6.87□□□□□ -1.31
HMGB1P44-201ENST00000508597 AFDNP55196 1824 aaKnown RBP6.87□□□□□ -1.31
HMGB1P44-201ENST00000508597 RIC1Q4ADV7 1423 aa6.86□□□□□ -1.31
HMGB1P44-201ENST00000508597 UTYO14607 1347 aa6.86□□□□□ -1.31
HMGB1P44-201ENST00000508597 UBN2Q6ZU65 1347 aa6.86□□□□□ -1.31
HMGB1P44-201ENST00000508597 C9orf172C9J069 976 aa6.86□□□□□ -1.31
HMGB1P44-201ENST00000508597 F6X3S4 739 aa6.86□□□□□ -1.31
HMGB1P44-201ENST00000508597 NPHP1O15259 732 aa6.86□□□□□ -1.31
HMGB1P44-201ENST00000508597 GADD45BO75293 160 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P44-201ENST00000508597 PRPF40AO75400 957 aaKnown RBP6.86□□□□□ -1.31
HMGB1P44-201ENST00000508597 NTSR2O95665 410 aa6.86□□□□□ -1.31
HMGB1P44-201ENST00000508597 IGKV5-2P06315 115 aa6.86□□□□□ -1.31
HMGB1P44-201ENST00000508597 ESRRAP11474 423 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P44-201ENST00000508597 VAMP1P23763 118 aa6.86□□□□□ -1.31
HMGB1P44-201ENST00000508597 CD68P34810 354 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P44-201ENST00000508597 RRP1P56182 461 aaKnown RBP6.86□□□□□ -1.31
HMGB1P44-201ENST00000508597 NRG1Q02297 640 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P44-201ENST00000508597 SUSD4Q5VX71 490 aa6.86□□□□□ -1.31
HMGB1P44-201ENST00000508597 CACTIN-AS1Q8N1I8 211 aa6.86□□□□□ -1.31
HMGB1P44-201ENST00000508597 CNBD1Q8NA66 436 aa6.86□□□□□ -1.31
HMGB1P44-201ENST00000508597 FBF1Q8TES7 1133 aa6.86□□□□□ -1.31
HMGB1P44-201ENST00000508597 UBASH3BQ8TF42 649 aa6.86□□□□□ -1.31
HMGB1P44-201ENST00000508597 WFDC12Q8WWY7 111 aa6.86□□□□□ -1.31
HMGB1P44-201ENST00000508597 BRIP1Q9BX63 1249 aa6.86□□□□□ -1.31
HMGB1P44-201ENST00000508597 PDGFDQ9GZP0 370 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P44-201ENST00000508597 TRMT112Q9UI30 125 aaKnown RBP6.86□□□□□ -1.31
HMGB1P44-201ENST00000508597 KIF13BQ9NQT8 1826 aa6.85□□□□□ -1.31
HMGB1P44-201ENST00000508597 GRM8O00222 908 aa6.85□□□□□ -1.31
HMGB1P44-201ENST00000508597 DLGAP3O95886 979 aa6.85□□□□□ -1.31
HMGB1P44-201ENST00000508597 LDHBP07195 334 aaKnown RBP6.85□□□□□ -1.31
HMGB1P44-201ENST00000508597 GNAI3P08754 354 aa6.85□□□□□ -1.31
HMGB1P44-201ENST00000508597 GPTP24298 496 aa6.85□□□□□ -1.31
HMGB1P44-201ENST00000508597 PDE6BP35913 854 aa6.85□□□□□ -1.31
HMGB1P44-201ENST00000508597 GATA4P43694 442 aa6.85□□□□□ -1.31
HMGB1P44-201ENST00000508597 TGFB2P61812 414 aa6.85□□□□□ -1.31
HMGB1P44-201ENST00000508597 ATP2B2Q01814 1243 aa6.85□□□□□ -1.31
HMGB1P44-201ENST00000508597 DDR1Q08345 913 aa6.85□□□□□ -1.31
HMGB1P44-201ENST00000508597 ALG1LQ6GMV1 187 aa6.85□□□□□ -1.31
HMGB1P44-201ENST00000508597 PRR5LQ6MZQ0 368 aa6.85□□□□□ -1.31
HMGB1P44-201ENST00000508597 NXPE4Q6UWF7 544 aa6.85□□□□□ -1.31
HMGB1P44-201ENST00000508597 PLA2G12BQ9BX93 195 aa6.85□□□□□ -1.31
HMGB1P44-201ENST00000508597 BCO2Q9BYV7 579 aa6.85□□□□□ -1.31
HMGB1P44-201ENST00000508597 OSBPL7Q9BZF2 842 aa6.85□□□□□ -1.31
HMGB1P44-201ENST00000508597 BCL11AQ9H165 835 aa6.85□□□□□ -1.31
HMGB1P44-201ENST00000508597 SEC31BQ9NQW1 1179 aa6.85□□□□□ -1.31
HMGB1P44-201ENST00000508597 TPSG1Q9NRR2 321 aa6.85□□□□□ -1.31
HMGB1P44-201ENST00000508597 C9orf78Q9NZ63 289 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P44-201ENST00000508597 DDX19BQ9UMR2 479 aa6.85□□□□□ -1.31
HMGB1P44-201ENST00000508597 CD2APQ9Y5K6 639 aa6.85□□□□□ -1.31
HMGB1P44-201ENST00000508597 MYH3P11055 1940 aa6.84□□□□□ -1.31
HMGB1P44-201ENST00000508597 LRP5O75197 1615 aa6.84□□□□□ -1.31
HMGB1P44-201ENST00000508597 TMEM238LA0A1B0GVL6 79 aa6.84□□□□□ -1.31
HMGB1P44-201ENST00000508597 KLRG2A4D1S0 409 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P44-201ENST00000508597 F8W735 103 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P44-201ENST00000508597 IRS4O14654 1257 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P44-201ENST00000508597 PDE8AO60658 829 aa6.84□□□□□ -1.31
HMGB1P44-201ENST00000508597 CTSBP07858 339 aa6.84□□□□□ -1.31
HMGB1P44-201ENST00000508597 FURINP09958 794 aa6.84□□□□□ -1.31
HMGB1P44-201ENST00000508597 ZNF157P51786 506 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P44-201ENST00000508597 NLRP12P59046 1061 aa6.84□□□□□ -1.31
HMGB1P44-201ENST00000508597 FAAP100Q0VG06 881 aa6.84□□□□□ -1.31
HMGB1P44-201ENST00000508597 IKBKEQ14164 716 aa6.84□□□□□ -1.31
HMGB1P44-201ENST00000508597 MVPQ14764 893 aaKnown RBP6.84□□□□□ -1.31
HMGB1P44-201ENST00000508597 SF3B3Q15393 1217 aaKnown RBP6.84□□□□□ -1.31
HMGB1P44-201ENST00000508597 CWF19L2Q2TBE0 894 aaKnown RBP6.84□□□□□ -1.31
HMGB1P44-201ENST00000508597 KIAA1211Q6ZU35 1233 aa6.84□□□□□ -1.31
HMGB1P44-201ENST00000508597 MRRFQ96E11 262 aaKnown RBP6.84□□□□□ -1.31
HMGB1P44-201ENST00000508597 MEGF10Q96KG7 1140 aa6.84□□□□□ -1.31
HMGB1P44-201ENST00000508597 SSBP4Q9BWG4 385 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P44-201ENST00000508597 USP44Q9H0E7 712 aa6.84□□□□□ -1.31
HMGB1P44-201ENST00000508597 ZNF576Q9H609 170 aa6.84□□□□□ -1.31
HMGB1P44-201ENST00000508597 KIAA1522Q9P206 1035 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P44-201ENST00000508597 C10orf71Q711Q0 1435 aa6.84□□□□□ -1.32
HMGB1P44-201ENST00000508597 LAMB2P55268 1798 aa6.83□□□□□ -1.32
HMGB1P44-201ENST00000508597 ECEL1O95672 775 aa6.83□□□□□ -1.32
HMGB1P44-201ENST00000508597 UBTFL1P0CB47 393 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P44-201ENST00000508597 ITPKAP23677 461 aa6.83□□□□□ -1.32
HMGB1P44-201ENST00000508597 CASP7P55210 303 aa6.83□□□□□ -1.32
HMGB1P44-201ENST00000508597 PCDH1Q08174 1060 aa6.83□□□□□ -1.32
HMGB1P44-201ENST00000508597 CRY2Q49AN0 593 aa6.83□□□□□ -1.32
HMGB1P44-201ENST00000508597 ITPRIPQ8IWB1 547 aa6.83□□□□□ -1.32
HMGB1P44-201ENST00000508597 TMEM57Q8N5G2 664 aa6.83□□□□□ -1.32
HMGB1P44-201ENST00000508597 FAM89AQ96GI7 184 aa6.83□□□□□ -1.32
HMGB1P44-201ENST00000508597 NACC1Q96RE7 527 aa6.83□□□□□ -1.32
HMGB1P44-201ENST00000508597 PPP1R1BQ9UD71 204 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P44-201ENST00000508597 SUPT16HQ9Y5B9 1047 aaKnown RBP6.83□□□□□ -1.32
HMGB1P44-201ENST00000508597 FAM177BA6PVY3 158 aa6.82□□□□□ -1.32
HMGB1P44-201ENST00000508597 H0YIN7 160 aa6.82□□□□□ -1.32
HMGB1P44-201ENST00000508597 PLIN1O60240 522 aa6.82□□□□□ -1.32
HMGB1P44-201ENST00000508597 IGHA1P01876 353 aa6.82□□□□□ -1.32
HMGB1P44-201ENST00000508597 GNAI2P04899 355 aa6.82□□□□□ -1.32
HMGB1P44-201ENST00000508597 CSF1RP07333 972 aa6.82□□□□□ -1.32
HMGB1P44-201ENST00000508597 NPR1P16066 1061 aa6.82□□□□□ -1.32
HMGB1P44-201ENST00000508597 ITGB7P26010 798 aa6.82□□□□□ -1.32
HMGB1P44-201ENST00000508597 ALDH1B1P30837 517 aa6.82□□□□□ -1.32
HMGB1P44-201ENST00000508597 HOXA10P31260 410 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms