RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 BUD31P41223 144 aaPredicted RBP6.41□□□□□ -1.38
NUP54-206ENST00000508465 PCNX4Q63HM2 1172 aa6.41□□□□□ -1.38
NUP54-206ENST00000508465 ZNF772Q68DY9 489 aaPredicted RBP6.41□□□□□ -1.38
NUP54-206ENST00000508465 HOMEZQ8IX15 550 aa6.41□□□□□ -1.38
NUP54-206ENST00000508465 RIN3Q8TB24 985 aa6.41□□□□□ -1.38
NUP54-206ENST00000508465 FBF1Q8TES7 1133 aa6.41□□□□□ -1.38
NUP54-206ENST00000508465 ANKRD24Q8TF21 1146 aa6.41□□□□□ -1.38
NUP54-206ENST00000508465 FBRSQ9HAH7 460 aa6.41□□□□□ -1.38
NUP54-206ENST00000508465 BIN2Q9UBW5 565 aaPredicted RBP6.41□□□□□ -1.38
NUP54-206ENST00000508465 TMEM59LQ9UK28 342 aa6.41□□□□□ -1.38
NUP54-206ENST00000508465 CENPJQ9HC77 1338 aaPredicted RBP6.41□□□□□ -1.38
NUP54-206ENST00000508465 RGPD8O14715 1765 aaPredicted RBP6.41□□□□□ -1.38
NUP54-206ENST00000508465 HK2P52789 917 aa6.4□□□□□ -1.38
NUP54-206ENST00000508465 LINC00310P59036 64 aa6.4□□□□□ -1.38
NUP54-206ENST00000508465 DSC3Q14574 896 aa6.4□□□□□ -1.38
NUP54-206ENST00000508465 NKG7Q16617 165 aa6.4□□□□□ -1.38
NUP54-206ENST00000508465 PLPPR2Q96GM1 343 aa6.4□□□□□ -1.38
NUP54-206ENST00000508465 CARD11Q9BXL7 1154 aa6.4□□□□□ -1.38
NUP54-206ENST00000508465 C1orf115Q9H7X2 142 aa6.4□□□□□ -1.38
NUP54-206ENST00000508465 KCNK12Q9HB15 430 aa6.4□□□□□ -1.38
NUP54-206ENST00000508465 ACEP12821 1306 aa6.4□□□□□ -1.39
NUP54-206ENST00000508465 ROCK2O75116 1388 aaKnown RBP6.4□□□□□ -1.39
NUP54-206ENST00000508465 TONSLQ96HA7 1378 aa6.4□□□□□ -1.39
NUP54-206ENST00000508465 PXDNQ92626 1479 aa6.4□□□□□ -1.39
NUP54-206ENST00000508465 DLC1Q96QB1 1528 aa6.4□□□□□ -1.39
NUP54-206ENST00000508465 CDC42BPGQ6DT37 1551 aa6.4□□□□□ -1.39
NUP54-206ENST00000508465 LAMC1P11047 1609 aa6.39□□□□□ -1.39
NUP54-206ENST00000508465 NHSL1Q5SYE7 1610 aa6.39□□□□□ -1.39
NUP54-206ENST00000508465 KNDC1Q76NI1 1749 aa6.39□□□□□ -1.39
NUP54-206ENST00000508465 DNAJC25-GNG10A0A024R161 153 aa6.39□□□□□ -1.39
NUP54-206ENST00000508465 FAM83GA6ND36 823 aa6.39□□□□□ -1.39
NUP54-206ENST00000508465 SOWAHDA6NJG2 315 aa6.39□□□□□ -1.39
NUP54-206ENST00000508465 CST3P01034 146 aaPredicted RBP6.39□□□□□ -1.39
NUP54-206ENST00000508465 SRFP11831 508 aa6.39□□□□□ -1.39
NUP54-206ENST00000508465 TNK2Q07912 1038 aa6.39□□□□□ -1.39
NUP54-206ENST00000508465 RALGPS1Q5JS13 557 aa6.39□□□□□ -1.39
NUP54-206ENST00000508465 RASIP1Q5U651 963 aa6.39□□□□□ -1.39
NUP54-206ENST00000508465 PIWIL2Q8TC59 973 aaKnown RBP6.39□□□□□ -1.39
NUP54-206ENST00000508465 GPRASP1Q5JY77 1395 aa6.39□□□□□ -1.39
NUP54-206ENST00000508465 FMN2Q9NZ56 1722 aa6.39□□□□□ -1.39
NUP54-206ENST00000508465 TREHO43280 583 aa6.38□□□□□ -1.39
NUP54-206ENST00000508465 HPXP02790 462 aa6.38□□□□□ -1.39
NUP54-206ENST00000508465 PRAMEF13Q5VWM6 474 aa6.38□□□□□ -1.39
NUP54-206ENST00000508465 CDH24Q86UP0 819 aa6.38□□□□□ -1.39
NUP54-206ENST00000508465 CREG2Q8IUH2 290 aa6.38□□□□□ -1.39
NUP54-206ENST00000508465 XAGE3Q8WTP9 111 aa6.38□□□□□ -1.39
NUP54-206ENST00000508465 SHPRHQ149N8 1683 aa6.38□□□□□ -1.39
NUP54-206ENST00000508465 USP32Q8NFA0 1604 aa6.37□□□□□ -1.39
NUP54-206ENST00000508465 ANKARQ7Z5J8 1434 aa6.37□□□□□ -1.39
NUP54-206ENST00000508465 SBNO1A3KN83 1393 aa6.37□□□□□ -1.39
NUP54-206ENST00000508465 EVC2Q86UK5 1308 aa6.37□□□□□ -1.39
NUP54-206ENST00000508465 ST20-MTHFSA0A0A6YYL1 179 aa6.37□□□□□ -1.39
NUP54-206ENST00000508465 ESR1P03372 595 aa6.37□□□□□ -1.39
NUP54-206ENST00000508465 MAPK1P28482 360 aa6.37□□□□□ -1.39
NUP54-206ENST00000508465 ETV3P41162 512 aa6.37□□□□□ -1.39
NUP54-206ENST00000508465 ERVFC1P60507 584 aa6.37□□□□□ -1.39
NUP54-206ENST00000508465 ZC3H6P61129 1189 aaKnown RBP6.37□□□□□ -1.39
NUP54-206ENST00000508465 RBM6P78332 1123 aaKnown RBP6.37□□□□□ -1.39
NUP54-206ENST00000508465 PTPN11Q06124 597 aaPredicted RBP6.37□□□□□ -1.39
NUP54-206ENST00000508465 CHRNA2Q15822 529 aa6.37□□□□□ -1.39
NUP54-206ENST00000508465 WIPI1Q5MNZ9 446 aaPredicted RBP6.37□□□□□ -1.39
NUP54-206ENST00000508465 ALG1LQ6GMV1 187 aa6.37□□□□□ -1.39
NUP54-206ENST00000508465 OXR1Q8N573 874 aa6.37□□□□□ -1.39
NUP54-206ENST00000508465 SYTL4Q96C24 671 aaPredicted RBP6.37□□□□□ -1.39
NUP54-206ENST00000508465 OSBPL7Q9BZF2 842 aa6.37□□□□□ -1.39
NUP54-206ENST00000508465 IRF2BPLQ9H1B7 796 aa6.37□□□□□ -1.39
NUP54-206ENST00000508465 ADAMTS10Q9H324 1103 aa6.37□□□□□ -1.39
NUP54-206ENST00000508465 TRIT1Q9H3H1 467 aaKnown RBP6.37□□□□□ -1.39
NUP54-206ENST00000508465 CCDC9Q9Y3X0 531 aaKnown RBP6.37□□□□□ -1.39
NUP54-206ENST00000508465 ZBTB7CA1YPR0 619 aa6.36□□□□□ -1.39
NUP54-206ENST00000508465 CELA3AP09093 270 aa6.36□□□□□ -1.39
NUP54-206ENST00000508465 LMNB1P20700 586 aa6.36□□□□□ -1.39
NUP54-206ENST00000508465 HOXA5P20719 270 aa6.36□□□□□ -1.39
NUP54-206ENST00000508465 GRK4P32298 578 aa6.36□□□□□ -1.39
NUP54-206ENST00000508465 MAPK8P45983 427 aa6.36□□□□□ -1.39
NUP54-206ENST00000508465 SV2BQ7L1I2 683 aa6.36□□□□□ -1.39
NUP54-206ENST00000508465 LILRA2Q8N149 483 aa6.36□□□□□ -1.39
NUP54-206ENST00000508465 RELTQ969Z4 430 aa6.36□□□□□ -1.39
NUP54-206ENST00000508465 SLC12A5Q9H2X9 1139 aa6.36□□□□□ -1.39
NUP54-206ENST00000508465 FAM8A1Q9UBU6 413 aa6.36□□□□□ -1.39
NUP54-206ENST00000508465 TRPC5Q9UL62 973 aaPredicted RBP6.36□□□□□ -1.39
NUP54-206ENST00000508465 SPG7Q9UQ90 795 aa6.36□□□□□ -1.39
NUP54-206ENST00000508465 ARHGEF28Q8N1W1 1705 aaKnown RBP6.36□□□□□ -1.39
NUP54-206ENST00000508465 TULP4Q9NRJ4 1543 aa6.35□□□□□ -1.39
NUP54-206ENST00000508465 TNS3Q68CZ2 1445 aa6.35□□□□□ -1.39
NUP54-206ENST00000508465 PPIP5K1Q6PFW1 1433 aa6.35□□□□□ -1.39
NUP54-206ENST00000508465 EIF3AQ14152 1382 aaKnown RBP6.35□□□□□ -1.39
NUP54-206ENST00000508465 TPP2P29144 1249 aaPredicted RBP6.35□□□□□ -1.39
NUP54-206ENST00000508465 UNC5CLQ8IV45 518 aa6.35□□□□□ -1.39
NUP54-206ENST00000508465 PDZD8Q8NEN9 1154 aa6.35□□□□□ -1.39
NUP54-206ENST00000508465 SLC6A17Q9H1V8 727 aa6.35□□□□□ -1.39
NUP54-206ENST00000508465 PARD6AQ9NPB6 346 aa6.35□□□□□ -1.39
NUP54-206ENST00000508465 BTG4Q9NY30 223 aa6.35□□□□□ -1.39
NUP54-206ENST00000508465 TACC3Q9Y6A5 838 aa6.35□□□□□ -1.39
NUP54-206ENST00000508465 KIAA1210Q9ULL0 1709 aa6.35□□□□□ -1.39
NUP54-206ENST00000508465 BCL9LQ86UU0 1499 aa6.34□□□□□ -1.39
NUP54-206ENST00000508465 ARHGEF10O15013 1369 aa6.34□□□□□ -1.39
NUP54-206ENST00000508465 ATP2B2Q01814 1243 aa6.34□□□□□ -1.39
NUP54-206ENST00000508465 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.34□□□□□ -1.39
NUP54-206ENST00000508465 IRF2BP1Q8IU81 584 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms