RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 CDC45O75419 566 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 PDE8BO95263 885 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 C6orf222P0C671 652 aaPredicted RBP3.33□□□□□ -1.88
NEDD4-208ENST00000508342 GNAQP50148 359 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 UBXN4Q92575 508 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 PBXIP1Q96AQ6 731 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 ANO3Q9BYT9 981 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 IGSF5Q9NSI5 407 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 PUF60Q9UHX1 559 aaKnown RBP3.33□□□□□ -1.88
NEDD4-208ENST00000508342 ZMYND8Q9ULU4 1186 aaPredicted RBP3.33□□□□□ -1.88
NEDD4-208ENST00000508342 CYP46A1Q9Y6A2 500 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 MYH1P12882 1939 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 GJB1P08034 283 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 KRT32Q14532 448 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 SLFN13Q68D06 897 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 RNF207Q6ZRF8 634 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 MOB2Q70IA6 237 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 FAM160B2Q86V87 743 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 HOOK3Q86VS8 718 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 FBXO11Q86XK2 927 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 FOXP4Q8IVH2 680 aaPredicted RBP3.33□□□□□ -1.88
NEDD4-208ENST00000508342 GIMAP8Q8ND71 665 aaPredicted RBP3.33□□□□□ -1.88
NEDD4-208ENST00000508342 SHCBP1Q8NEM2 672 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 ZNF296Q8WUU4 475 aaPredicted RBP3.33□□□□□ -1.88
NEDD4-208ENST00000508342 ZNF396Q96N95 335 aaPredicted RBP3.33□□□□□ -1.88
NEDD4-208ENST00000508342 MEIS3Q99687 375 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 TSPY26PQ9H489 355 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 FAM13BQ9NYF5 915 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 HPS5Q9UPZ3 1129 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 ZNF536O15090 1300 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 CNTNAP1P78357 1384 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 ARFGEF1Q9Y6D6 1849 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 CCDC194A0A1B0GVG4 234 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 CHL1O00533 1208 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 ABCB7O75027 752 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 GRK4P32298 578 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 ARL1P40616 181 aaPredicted RBP3.33□□□□□ -1.88
NEDD4-208ENST00000508342 PHKA1P46020 1223 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 STRN3Q13033 797 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 DIXDC1Q155Q3 683 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 SKIDA1Q1XH10 827 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 CDC42EP5Q6NZY7 148 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 CENPQQ7L2Z9 268 aaPredicted RBP3.33□□□□□ -1.88
NEDD4-208ENST00000508342 ERMNQ8TAM6 284 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 EXOC4Q96A65 974 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 PITPNM2Q9BZ72 1349 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 PRDM10Q9NQV6 1147 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 KCNQ5Q9NR82 932 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 POLR3EQ9NVU0 708 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 SYNPO2Q9UMS6 1093 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 IBTKQ9P2D0 1353 aaPredicted RBP3.33□□□□□ -1.88
NEDD4-208ENST00000508342 FAM196BA6NMK8 535 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 PHACTR2O75167 634 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 HMGCRP04035 888 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 METAP2P50579 478 aaKnown RBP eCLIP3.33□□□□□ -1.88
NEDD4-208ENST00000508342 ATP8B2P98198 1209 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 TNFAIP2Q03169 654 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 TMEM179Q6ZVK1 233 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 CHD1LQ86WJ1 897 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 TTLL11Q8NHH1 800 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 DPF2Q92785 391 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 EDC3Q96F86 508 aaKnown RBP3.33□□□□□ -1.88
NEDD4-208ENST00000508342 APOL6Q9BWW8 343 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 PPP1R12CQ9BZL4 782 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 SYNCQ9H7C4 482 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 AAASQ9NRG9 546 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 MRVI1Q9Y6F6 885 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 UBN2Q6ZU65 1347 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 DKC1O60832 514 aaKnown RBP eCLIP3.33□□□□□ -1.88
NEDD4-208ENST00000508342 ZBTB48P10074 688 aaPredicted RBP3.33□□□□□ -1.88
NEDD4-208ENST00000508342 PRMT2P55345 433 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 PPARAQ07869 468 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 BFSP2Q13515 415 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 DHX8Q14562 1220 aaKnown RBP3.33□□□□□ -1.88
NEDD4-208ENST00000508342 ENOX2Q16206 610 aaKnown RBP3.33□□□□□ -1.88
NEDD4-208ENST00000508342 HS1BP3Q53T59 392 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 OTUD6AQ7L8S5 288 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 SESTD1Q86VW0 696 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 PCSK9Q8NBP7 692 aaKnown RBP3.33□□□□□ -1.88
NEDD4-208ENST00000508342 SYMPKQ92797 1274 aaKnown RBP3.33□□□□□ -1.88
NEDD4-208ENST00000508342 SGIP1Q9BQI5 828 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 SLC26A6Q9BXS9 759 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 GBP3Q9H0R5 595 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 ACBD3Q9H3P7 528 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 HELLSQ9NRZ9 838 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 CCDC39Q9UFE4 941 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 TRIM35Q9UPQ4 493 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 SLX4Q8IY92 1834 aa3.33□□□□□ -1.88
NEDD4-208ENST00000508342 CYP2C8P10632 490 aa3.32□□□□□ -1.88
NEDD4-208ENST00000508342 RTN1Q16799 776 aa3.32□□□□□ -1.88
NEDD4-208ENST00000508342 PTPROQ16827 1216 aa3.32□□□□□ -1.88
NEDD4-208ENST00000508342 DPH6Q7L8W6 267 aa3.32□□□□□ -1.88
NEDD4-208ENST00000508342 USP37Q86T82 979 aa3.32□□□□□ -1.88
NEDD4-208ENST00000508342 RAB11FIP4Q86YS3 637 aa3.32□□□□□ -1.88
NEDD4-208ENST00000508342 ZBTB10Q96DT7 871 aa3.32□□□□□ -1.88
NEDD4-208ENST00000508342 DDX27Q96GQ7 796 aaKnown RBP3.32□□□□□ -1.88
NEDD4-208ENST00000508342 JAKMIP1Q96N16 626 aaKnown RBP3.32□□□□□ -1.88
NEDD4-208ENST00000508342 PLEKHF1Q96S99 279 aa3.32□□□□□ -1.88
NEDD4-208ENST00000508342 ECHDC1Q9NTX5 307 aa3.32□□□□□ -1.88
NEDD4-208ENST00000508342 PDRG1Q9NUG6 133 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms