RNA–Protein interactions for RNA: ENST00000508317.5

DDR1-263, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-263ENST00000508317 ZNF697Q5TEC3 545 aa19.36■□□□□ 0.69
DDR1-263ENST00000508317 MAMDC4Q6UXC1 1216 aa19.36■□□□□ 0.69
DDR1-263ENST00000508317 RWDD1Q9H446 243 aaPredicted RBP19.36■□□□□ 0.69
DDR1-263ENST00000508317 TMEM39AQ9NV64 488 aa19.36■□□□□ 0.69
DDR1-263ENST00000508317 PNMA2Q9UL42 364 aa19.36■□□□□ 0.69
DDR1-263ENST00000508317 PLIN4Q96Q06 1357 aa19.35■□□□□ 0.69
DDR1-263ENST00000508317 PRUNE2Q8WUY3 3088 aa19.35■□□□□ 0.69
DDR1-263ENST00000508317 A0A1W2PQ45 241 aaPredicted RBP19.35■□□□□ 0.69
DDR1-263ENST00000508317 A0A1W2PQY0 241 aa19.35■□□□□ 0.69
DDR1-263ENST00000508317 DUSP11O75319 330 aaKnown RBP19.35■□□□□ 0.69
DDR1-263ENST00000508317 ZNF865P0CJ78 1059 aaPredicted RBP19.35■□□□□ 0.69
DDR1-263ENST00000508317 SNX17Q15036 470 aa19.35■□□□□ 0.69
DDR1-263ENST00000508317 RCSD1Q6JBY9 416 aa19.35■□□□□ 0.69
DDR1-263ENST00000508317 BADQ92934 168 aa19.35■□□□□ 0.69
DDR1-263ENST00000508317 MPHOSPH6Q99547 160 aaKnown RBP19.35■□□□□ 0.69
DDR1-263ENST00000508317 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.35■□□□□ 0.69
DDR1-263ENST00000508317 MTMR7Q9Y216 660 aa19.35■□□□□ 0.69
DDR1-263ENST00000508317 TLR3O15455 904 aaKnown RBP19.34■□□□□ 0.69
DDR1-263ENST00000508317 ZEB2O60315 1214 aa19.34■□□□□ 0.69
DDR1-263ENST00000508317 ALAS1P13196 640 aa19.34■□□□□ 0.69
DDR1-263ENST00000508317 TAL1P17542 331 aaPredicted RBP19.34■□□□□ 0.69
DDR1-263ENST00000508317 ACLYP53396 1101 aa19.34■□□□□ 0.69
DDR1-263ENST00000508317 RRP12Q5JTH9 1297 aaKnown RBP19.34■□□□□ 0.69
DDR1-263ENST00000508317 FAM109BQ6ICB4 259 aaPredicted RBP19.34■□□□□ 0.69
DDR1-263ENST00000508317 OTUD7AQ8TE49 926 aaPredicted RBP19.34■□□□□ 0.69
DDR1-263ENST00000508317 AP5M1Q9H0R1 490 aa19.34■□□□□ 0.69
DDR1-263ENST00000508317 PDLIM7Q9NR12 457 aa19.34■□□□□ 0.69
DDR1-263ENST00000508317 RNF146Q9NTX7 359 aa19.34■□□□□ 0.69
DDR1-263ENST00000508317 RIPK3Q9Y572 518 aa19.34■□□□□ 0.69
DDR1-263ENST00000508317 BAZ2AQ9UIF9 1905 aaKnown RBP19.33■□□□□ 0.69
DDR1-263ENST00000508317 DNAJC25-GNG10A0A024R161 153 aa19.33■□□□□ 0.68
DDR1-263ENST00000508317 CTDSPL2Q05D32 466 aa19.33■□□□□ 0.68
DDR1-263ENST00000508317 MCMDC2Q4G0Z9 681 aa19.33■□□□□ 0.68
DDR1-263ENST00000508317 GNASQ5JWF2 1037 aa19.33■□□□□ 0.68
DDR1-263ENST00000508317 ERICH6BQ5W0A0 696 aa19.33■□□□□ 0.68
DDR1-263ENST00000508317 ARMCX2Q7L311 632 aa19.33■□□□□ 0.68
DDR1-263ENST00000508317 TRERF1Q96PN7 1200 aa19.33■□□□□ 0.68
DDR1-263ENST00000508317 MYH8P13535 1937 aa19.33■□□□□ 0.68
DDR1-263ENST00000508317 SYNRGQ9UMZ2 1314 aa19.32■□□□□ 0.68
DDR1-263ENST00000508317 A0A0G2JMZ2 1700 aa19.32■□□□□ 0.68
DDR1-263ENST00000508317 PLA2G6O60733 806 aa19.32■□□□□ 0.68
DDR1-263ENST00000508317 PDE1AP54750 535 aa19.32■□□□□ 0.68
DDR1-263ENST00000508317 FPGSQ05932 587 aa19.32■□□□□ 0.68
DDR1-263ENST00000508317 KCNA10Q16322 511 aa19.32■□□□□ 0.68
DDR1-263ENST00000508317 CCDC129Q6ZRS4 1044 aa19.32■□□□□ 0.68
DDR1-263ENST00000508317 KCTD1Q719H9 257 aa19.32■□□□□ 0.68
DDR1-263ENST00000508317 DCAF4Q8WV16 495 aa19.32■□□□□ 0.68
DDR1-263ENST00000508317 RILPL2Q969X0 211 aa19.32■□□□□ 0.68
DDR1-263ENST00000508317 CHMP4CQ96CF2 233 aa19.32■□□□□ 0.68
DDR1-263ENST00000508317 TOX2Q96NM4 488 aa19.32■□□□□ 0.68
DDR1-263ENST00000508317 RNF41Q9H4P4 317 aaPredicted RBP19.32■□□□□ 0.68
DDR1-263ENST00000508317 CCPG1Q9ULG6 757 aa19.32■□□□□ 0.68
DDR1-263ENST00000508317 ELP1O95163 1332 aa19.31■□□□□ 0.68
DDR1-263ENST00000508317 SNAI1O95863 264 aaPredicted RBP19.31■□□□□ 0.68
DDR1-263ENST00000508317 PCP11498 1178 aaKnown RBP19.31■□□□□ 0.68
DDR1-263ENST00000508317 ALX1Q15699 326 aa19.31■□□□□ 0.68
DDR1-263ENST00000508317 CCDC144BQ3MJ40 725 aa19.31■□□□□ 0.68
DDR1-263ENST00000508317 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.31■□□□□ 0.68
DDR1-263ENST00000508317 RNPC3Q96LT9 517 aaKnown RBP19.31■□□□□ 0.68
DDR1-263ENST00000508317 ADD3Q9UEY8 706 aaKnown RBP19.31■□□□□ 0.68
DDR1-263ENST00000508317 ANAPC4Q9UJX5 808 aa19.31■□□□□ 0.68
DDR1-263ENST00000508317 A0A0U1RQG5 324 aaPredicted RBP19.3■□□□□ 0.68
DDR1-263ENST00000508317 B4DLN1 442 aa19.3■□□□□ 0.68
DDR1-263ENST00000508317 ORC4O43929 436 aa19.3■□□□□ 0.68
DDR1-263ENST00000508317 TOP1P11387 765 aaKnown RBP19.3■□□□□ 0.68
DDR1-263ENST00000508317 MRPL12P52815 198 aaKnown RBP19.3■□□□□ 0.68
DDR1-263ENST00000508317 TNFAIP2Q03169 654 aa19.3■□□□□ 0.68
DDR1-263ENST00000508317 SHHQ15465 462 aa19.3■□□□□ 0.68
DDR1-263ENST00000508317 NSMFQ6X4W1 530 aa19.3■□□□□ 0.68
DDR1-263ENST00000508317 MFSD6Q6ZSS7 791 aa19.3■□□□□ 0.68
DDR1-263ENST00000508317 CCDC144CPQ8IYA2 1237 aa19.3■□□□□ 0.68
DDR1-263ENST00000508317 KIAA0355O15063 1070 aa19.29■□□□□ 0.68
DDR1-263ENST00000508317 ADAMTS4O75173 837 aa19.29■□□□□ 0.68
DDR1-263ENST00000508317 CABYRO75952 493 aa19.29■□□□□ 0.68
DDR1-263ENST00000508317 IGHDP01880 384 aa19.29■□□□□ 0.68
DDR1-263ENST00000508317 CST5P28325 142 aaPredicted RBP19.29■□□□□ 0.68
DDR1-263ENST00000508317 CCDC178Q5BJE1 867 aa19.29■□□□□ 0.68
DDR1-263ENST00000508317 ANKRD33Q7Z3H0 272 aa19.29■□□□□ 0.68
DDR1-263ENST00000508317 LENG1Q96BZ8 264 aaPredicted RBP19.29■□□□□ 0.68
DDR1-263ENST00000508317 AGBL1Q96MI9 1066 aa19.29■□□□□ 0.68
DDR1-263ENST00000508317 FAM161BQ96MY7 647 aa19.29■□□□□ 0.68
DDR1-263ENST00000508317 SEZ6LQ9BYH1 1024 aa19.29■□□□□ 0.68
DDR1-263ENST00000508317 PRDM6Q9NQX0 595 aa19.29■□□□□ 0.68
DDR1-263ENST00000508317 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.29■□□□□ 0.68
DDR1-263ENST00000508317 MYH7P12883 1935 aa19.29■□□□□ 0.68
DDR1-263ENST00000508317 TRIM43BA6NCK2 446 aa19.28■□□□□ 0.68
DDR1-263ENST00000508317 HIP1O00291 1037 aa19.28■□□□□ 0.68
DDR1-263ENST00000508317 ASGR1P07306 291 aa19.28■□□□□ 0.68
DDR1-263ENST00000508317 NT5C2P49902 561 aa19.28■□□□□ 0.68
DDR1-263ENST00000508317 GJA9P57773 515 aa19.28■□□□□ 0.68
DDR1-263ENST00000508317 SMAD3P84022 425 aaKnown RBP19.28■□□□□ 0.68
DDR1-263ENST00000508317 BRDTQ58F21 947 aaPredicted RBP19.28■□□□□ 0.68
DDR1-263ENST00000508317 TMEM199Q8N511 208 aa19.28■□□□□ 0.68
DDR1-263ENST00000508317 TRIM43Q96BQ3 446 aaPredicted RBP19.28■□□□□ 0.68
DDR1-263ENST00000508317 MTIF3Q9H2K0 278 aaKnown RBP19.28■□□□□ 0.68
DDR1-263ENST00000508317 A1CFQ9NQ94 594 aaKnown RBP19.28■□□□□ 0.68
DDR1-263ENST00000508317 DIAPH3Q9NSV4 1193 aa19.28■□□□□ 0.68
DDR1-263ENST00000508317 PRR12Q9ULL5 1215 aa19.28■□□□□ 0.68
DDR1-263ENST00000508317 ICAM1P05362 532 aa19.27■□□□□ 0.68
DDR1-263ENST00000508317 CNTN2Q02246 1040 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms