RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 FNDC3BQ53EP0 1204 aaKnown RBP9.51□□□□□ -0.89
COL6A4P1-204ENST00000508169 TCTN2Q96GX1 697 aa9.51□□□□□ -0.89
COL6A4P1-204ENST00000508169 MRPL4Q9BYD3 311 aaKnown RBP9.51□□□□□ -0.89
COL6A4P1-204ENST00000508169 SPC25Q9HBM1 224 aa9.51□□□□□ -0.89
COL6A4P1-204ENST00000508169 RFPL3O75679 317 aa9.5□□□□□ -0.89
COL6A4P1-204ENST00000508169 RAPGEF3O95398 923 aa9.5□□□□□ -0.89
COL6A4P1-204ENST00000508169 CPP00450 1065 aa9.5□□□□□ -0.89
COL6A4P1-204ENST00000508169 CD3EP07766 207 aa9.5□□□□□ -0.89
COL6A4P1-204ENST00000508169 MAP4K2Q12851 820 aa9.5□□□□□ -0.89
COL6A4P1-204ENST00000508169 PABPC4Q13310 644 aaKnown RBP eCLIP9.5□□□□□ -0.89
COL6A4P1-204ENST00000508169 TSPYL5Q86VY4 417 aaPredicted RBP9.5□□□□□ -0.89
COL6A4P1-204ENST00000508169 NINJ1Q92982 152 aa9.5□□□□□ -0.89
COL6A4P1-204ENST00000508169 HSPA12BQ96MM6 686 aa9.5□□□□□ -0.89
COL6A4P1-204ENST00000508169 IFT57Q9NWB7 429 aa9.5□□□□□ -0.89
COL6A4P1-204ENST00000508169 PLAGL2Q9UPG8 496 aa9.5□□□□□ -0.89
COL6A4P1-204ENST00000508169 H3BS24 57 aa9.49□□□□□ -0.89
COL6A4P1-204ENST00000508169 STXBP3O00186 592 aa9.49□□□□□ -0.89
COL6A4P1-204ENST00000508169 CYP26A1O43174 497 aa9.49□□□□□ -0.89
COL6A4P1-204ENST00000508169 SCG5P05408 212 aa9.49□□□□□ -0.89
COL6A4P1-204ENST00000508169 TPP2P29144 1249 aaPredicted RBP9.49□□□□□ -0.89
COL6A4P1-204ENST00000508169 BMP8BP34820 402 aa9.49□□□□□ -0.89
COL6A4P1-204ENST00000508169 ECI1P42126 302 aa9.49□□□□□ -0.89
COL6A4P1-204ENST00000508169 SCRN1Q12765 414 aa9.49□□□□□ -0.89
COL6A4P1-204ENST00000508169 PTPROQ16827 1216 aa9.49□□□□□ -0.89
COL6A4P1-204ENST00000508169 RSPO4Q2I0M5 234 aaPredicted RBP9.49□□□□□ -0.89
COL6A4P1-204ENST00000508169 NKAPLQ5M9Q1 402 aa9.49□□□□□ -0.89
COL6A4P1-204ENST00000508169 THAP5Q7Z6K1 395 aa9.49□□□□□ -0.89
COL6A4P1-204ENST00000508169 NIM1KQ8IY84 436 aa9.49□□□□□ -0.89
COL6A4P1-204ENST00000508169 TMEM145Q8NBT3 493 aa9.49□□□□□ -0.89
COL6A4P1-204ENST00000508169 MCMBPQ9BTE3 642 aa9.49□□□□□ -0.89
COL6A4P1-204ENST00000508169 AURKAO14965 403 aa9.48□□□□□ -0.89
COL6A4P1-204ENST00000508169 PPM1GO15355 546 aaPredicted RBP9.48□□□□□ -0.89
COL6A4P1-204ENST00000508169 PROCP04070 461 aa9.48□□□□□ -0.89
COL6A4P1-204ENST00000508169 NOP2P46087 812 aaKnown RBP9.48□□□□□ -0.89
COL6A4P1-204ENST00000508169 IFI16Q16666 785 aaKnown RBP9.48□□□□□ -0.89
COL6A4P1-204ENST00000508169 PRSS53Q2L4Q9 553 aa9.48□□□□□ -0.89
COL6A4P1-204ENST00000508169 SLC51AQ86UW1 340 aa9.48□□□□□ -0.89
COL6A4P1-204ENST00000508169 ZDHHC13Q8IUH4 622 aa9.48□□□□□ -0.89
COL6A4P1-204ENST00000508169 ANKRD13AQ8IZ07 590 aa9.48□□□□□ -0.89
COL6A4P1-204ENST00000508169 PLD6Q8N2A8 252 aaKnown RBP9.48□□□□□ -0.89
COL6A4P1-204ENST00000508169 NETO1Q8TDF5 533 aa9.48□□□□□ -0.89
COL6A4P1-204ENST00000508169 MFSD3Q96ES6 412 aa9.48□□□□□ -0.89
COL6A4P1-204ENST00000508169 GPATCH3Q96I76 525 aa9.48□□□□□ -0.89
COL6A4P1-204ENST00000508169 PIM2Q9P1W9 311 aa9.48□□□□□ -0.89
COL6A4P1-204ENST00000508169 ZSWIM5Q9P217 1185 aa9.48□□□□□ -0.89
COL6A4P1-204ENST00000508169 SFMBT1Q9UHJ3 866 aa9.48□□□□□ -0.89
COL6A4P1-204ENST00000508169 BACE2Q9Y5Z0 518 aa9.48□□□□□ -0.89
COL6A4P1-204ENST00000508169 C6orf222P0C671 652 aaPredicted RBP9.47□□□□□ -0.89
COL6A4P1-204ENST00000508169 VAV1P15498 845 aa9.47□□□□□ -0.89
COL6A4P1-204ENST00000508169 MASP1P48740 699 aa9.47□□□□□ -0.89
COL6A4P1-204ENST00000508169 PCBP3P57721 371 aaKnown RBP9.47□□□□□ -0.89
COL6A4P1-204ENST00000508169 SLC35F1Q5T1Q4 408 aa9.47□□□□□ -0.89
COL6A4P1-204ENST00000508169 ZCRB1Q8TBF4 217 aaKnown RBP9.47□□□□□ -0.89
COL6A4P1-204ENST00000508169 UBE2FQ969M7 185 aa9.47□□□□□ -0.89
COL6A4P1-204ENST00000508169 C1orf159Q96HA4 380 aa9.47□□□□□ -0.89
COL6A4P1-204ENST00000508169 SPOCK3Q9BQ16 436 aa9.47□□□□□ -0.89
COL6A4P1-204ENST00000508169 RNF112Q9ULX5 631 aa9.47□□□□□ -0.89
COL6A4P1-204ENST00000508169 TMEM265A0A087WTH1 108 aa9.46□□□□□ -0.9
COL6A4P1-204ENST00000508169 SSU72P8A0A1W2PR75 194 aa9.46□□□□□ -0.9
COL6A4P1-204ENST00000508169 BLACEA4D250 179 aa9.46□□□□□ -0.9
COL6A4P1-204ENST00000508169 WASH4PA8MWX3 477 aa9.46□□□□□ -0.9
COL6A4P1-204ENST00000508169 DYRK3O43781 588 aa9.46□□□□□ -0.9
COL6A4P1-204ENST00000508169 ZNF205O95201 554 aa9.46□□□□□ -0.9
COL6A4P1-204ENST00000508169 SYPP08247 313 aa9.46□□□□□ -0.9
COL6A4P1-204ENST00000508169 IFNGR1P15260 489 aa9.46□□□□□ -0.9
COL6A4P1-204ENST00000508169 CYP4F3Q08477 520 aa9.46□□□□□ -0.9
COL6A4P1-204ENST00000508169 GAB4Q2WGN9 574 aa9.46□□□□□ -0.9
COL6A4P1-204ENST00000508169 TM4SF20Q53R12 229 aa9.46□□□□□ -0.9
COL6A4P1-204ENST00000508169 DHX37Q8IY37 1157 aaKnown RBP9.46□□□□□ -0.9
COL6A4P1-204ENST00000508169 USHBP1Q8N6Y0 703 aa9.46□□□□□ -0.9
COL6A4P1-204ENST00000508169 LINC00116Q8NCU8 138 aa9.46□□□□□ -0.9
COL6A4P1-204ENST00000508169 COPS5Q92905 334 aa9.46□□□□□ -0.9
COL6A4P1-204ENST00000508169 CLUHP3Q96NS8 147 aa9.46□□□□□ -0.9
COL6A4P1-204ENST00000508169 FCRL3Q96P31 734 aaPredicted RBP9.46□□□□□ -0.9
COL6A4P1-204ENST00000508169 SLC12A9Q9BXP2 914 aa9.46□□□□□ -0.9
COL6A4P1-204ENST00000508169 SEMA3GQ9NS98 782 aa9.46□□□□□ -0.9
COL6A4P1-204ENST00000508169 SNX11Q9Y5W9 270 aa9.46□□□□□ -0.9
COL6A4P1-204ENST00000508169 C2orf71A6NGG8 1288 aa9.45□□□□□ -0.9
COL6A4P1-204ENST00000508169 IRS4O14654 1257 aaPredicted RBP9.45□□□□□ -0.9
COL6A4P1-204ENST00000508169 MSTNO14793 375 aa9.45□□□□□ -0.9
COL6A4P1-204ENST00000508169 FOSL1P15407 271 aa9.45□□□□□ -0.9
COL6A4P1-204ENST00000508169 IBSPP21815 317 aaPredicted RBP9.45□□□□□ -0.9
COL6A4P1-204ENST00000508169 GABREP78334 506 aa9.45□□□□□ -0.9
COL6A4P1-204ENST00000508169 NTRK3Q16288 839 aa9.45□□□□□ -0.9
COL6A4P1-204ENST00000508169 TRIM61Q5EBN2 209 aa9.45□□□□□ -0.9
COL6A4P1-204ENST00000508169 USP53Q70EK8 1073 aa9.45□□□□□ -0.9
COL6A4P1-204ENST00000508169 BRINP2Q9C0B6 783 aa9.45□□□□□ -0.9
COL6A4P1-204ENST00000508169 ZC3H7BQ9UGR2 993 aaKnown RBP9.45□□□□□ -0.9
COL6A4P1-204ENST00000508169 NDOR1Q9UHB4 597 aa9.45□□□□□ -0.9
COL6A4P1-204ENST00000508169 DUSP13Q9UII6 198 aa9.45□□□□□ -0.9
COL6A4P1-204ENST00000508169 TCFL5Q9UL49 500 aa9.45□□□□□ -0.9
COL6A4P1-204ENST00000508169 COL4A3BPQ9Y5P4 624 aa9.45□□□□□ -0.9
COL6A4P1-204ENST00000508169 PRR19A6NJB7 356 aa9.44□□□□□ -0.9
COL6A4P1-204ENST00000508169 THBDP07204 575 aa9.44□□□□□ -0.9
COL6A4P1-204ENST00000508169 LTKP29376 864 aa9.44□□□□□ -0.9
COL6A4P1-204ENST00000508169 SEPHS1P49903 392 aa9.44□□□□□ -0.9
COL6A4P1-204ENST00000508169 RNF111Q6ZNA4 994 aa9.44□□□□□ -0.9
COL6A4P1-204ENST00000508169 TMPRSS7Q7RTY8 843 aa9.44□□□□□ -0.9
COL6A4P1-204ENST00000508169 KREMEN2Q8NCW0 462 aa9.44□□□□□ -0.9
COL6A4P1-204ENST00000508169 PTPRN2Q92932 1015 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms