RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 ALG1Q9BT22 464 aa12.65□□□□□ -0.39
PROM1-207ENST00000508167 GOLPH3LQ9H4A5 285 aa12.65□□□□□ -0.39
PROM1-207ENST00000508167 GJB4Q9NTQ9 266 aa12.65□□□□□ -0.39
PROM1-207ENST00000508167 SPRYD7Q5W111 196 aa12.64□□□□□ -0.39
PROM1-207ENST00000508167 SLF1Q9BQI6 1058 aa12.64□□□□□ -0.39
PROM1-207ENST00000508167 HOMER2Q9NSB8 354 aa12.64□□□□□ -0.39
PROM1-207ENST00000508167 EMILIN3Q9NT22 766 aa12.64□□□□□ -0.39
PROM1-207ENST00000508167 TMTC3Q6ZXV5 915 aa12.64□□□□□ -0.39
PROM1-207ENST00000508167 FAM160B2Q86V87 743 aa12.64□□□□□ -0.39
PROM1-207ENST00000508167 RGS22Q8NE09 1264 aa12.64□□□□□ -0.39
PROM1-207ENST00000508167 ENGASEQ8NFI3 743 aa12.64□□□□□ -0.39
PROM1-207ENST00000508167 C8orf76Q96K31 380 aa12.64□□□□□ -0.39
PROM1-207ENST00000508167 PIGSQ96S52 555 aa12.64□□□□□ -0.39
PROM1-207ENST00000508167 FEM1BQ9UK73 627 aa12.64□□□□□ -0.39
PROM1-207ENST00000508167 SSC5DA1L4H1 1573 aa12.64□□□□□ -0.39
PROM1-207ENST00000508167 PDCP20941 246 aa12.64□□□□□ -0.39
PROM1-207ENST00000508167 HTRA3P83110 453 aa12.64□□□□□ -0.39
PROM1-207ENST00000508167 BAZ2BQ9UIF8 2168 aaKnown RBP12.63□□□□□ -0.39
PROM1-207ENST00000508167 NAPAP54920 295 aa12.63□□□□□ -0.39
PROM1-207ENST00000508167 NLRP5P59047 1200 aa12.63□□□□□ -0.39
PROM1-207ENST00000508167 PRPF38AQ8NAV1 312 aaKnown RBP12.63□□□□□ -0.39
PROM1-207ENST00000508167 PNMA3Q9UL41 463 aa12.63□□□□□ -0.39
PROM1-207ENST00000508167 SIPA1L1O43166 1804 aa12.63□□□□□ -0.39
PROM1-207ENST00000508167 GREB1LQ9C091 1923 aaPredicted RBP12.63□□□□□ -0.39
PROM1-207ENST00000508167 RCAN1P53805 252 aa12.63□□□□□ -0.39
PROM1-207ENST00000508167 COG2Q14746 738 aa12.63□□□□□ -0.39
PROM1-207ENST00000508167 SRBD1Q8N5C6 995 aaKnown RBP12.63□□□□□ -0.39
PROM1-207ENST00000508167 GMCL1Q96IK5 515 aa12.63□□□□□ -0.39
PROM1-207ENST00000508167 BRMS1Q9HCU9 246 aa12.63□□□□□ -0.39
PROM1-207ENST00000508167 HOXC10Q9NYD6 342 aa12.63□□□□□ -0.39
PROM1-207ENST00000508167 MAD2L2Q9UI95 211 aa12.63□□□□□ -0.39
PROM1-207ENST00000508167 RCOR1Q9UKL0 485 aa12.63□□□□□ -0.39
PROM1-207ENST00000508167 TLL2Q9Y6L7 1015 aa12.63□□□□□ -0.39
PROM1-207ENST00000508167 DEXIO95424 95 aa12.63□□□□□ -0.39
PROM1-207ENST00000508167 CLCN1P35523 988 aa12.63□□□□□ -0.39
PROM1-207ENST00000508167 NBPF11Q86T75 865 aa12.63□□□□□ -0.39
PROM1-207ENST00000508167 ADGRF4Q8IZF3 695 aa12.63□□□□□ -0.39
PROM1-207ENST00000508167 IFNAR1P17181 557 aa12.62□□□□□ -0.39
PROM1-207ENST00000508167 NCLP19338 710 aaKnown RBP12.62□□□□□ -0.39
PROM1-207ENST00000508167 UNCXA6NJT0 531 aa12.62□□□□□ -0.39
PROM1-207ENST00000508167 CDC37Q16543 378 aaPredicted RBP12.62□□□□□ -0.39
PROM1-207ENST00000508167 GPKOWQ92917 476 aaPredicted RBP eCLIP12.62□□□□□ -0.39
PROM1-207ENST00000508167 BEGAINQ9BUH8 593 aa12.62□□□□□ -0.39
PROM1-207ENST00000508167 PALM3A6NDB9 673 aaPredicted RBP12.62□□□□□ -0.39
PROM1-207ENST00000508167 MANSC4A6NHS7 340 aaPredicted RBP12.62□□□□□ -0.39
PROM1-207ENST00000508167 NR1I2O75469 434 aa12.62□□□□□ -0.39
PROM1-207ENST00000508167 ZBTB48P10074 688 aaPredicted RBP12.62□□□□□ -0.39
PROM1-207ENST00000508167 ALAS1P13196 640 aa12.62□□□□□ -0.39
PROM1-207ENST00000508167 CAPNS2Q96L46 248 aa12.62□□□□□ -0.39
PROM1-207ENST00000508167 PRR12Q9ULL5 1215 aa12.62□□□□□ -0.39
PROM1-207ENST00000508167 TAF1CQ15572 869 aaPredicted RBP12.61□□□□□ -0.39
PROM1-207ENST00000508167 KIAA1755Q5JYT7 1200 aa12.61□□□□□ -0.39
PROM1-207ENST00000508167 TREML2Q5T2D2 321 aa12.61□□□□□ -0.39
PROM1-207ENST00000508167 FBXO11Q86XK2 927 aa12.61□□□□□ -0.39
PROM1-207ENST00000508167 ATG4CQ96DT6 458 aa12.61□□□□□ -0.39
PROM1-207ENST00000508167 USP28Q96RU2 1077 aa12.61□□□□□ -0.39
PROM1-207ENST00000508167 TFIP11Q9UBB9 837 aaKnown RBP12.61□□□□□ -0.39
PROM1-207ENST00000508167 CCPG1Q9ULG6 757 aa12.61□□□□□ -0.39
PROM1-207ENST00000508167 PASKQ96RG2 1323 aa12.61□□□□□ -0.39
PROM1-207ENST00000508167 MYH8P13535 1937 aa12.61□□□□□ -0.39
PROM1-207ENST00000508167 SREBF2Q12772 1141 aa12.61□□□□□ -0.39
PROM1-207ENST00000508167 CCDC12Q8WUD4 166 aaPredicted RBP12.61□□□□□ -0.39
PROM1-207ENST00000508167 TSPY26PQ9H489 355 aa12.61□□□□□ -0.39
PROM1-207ENST00000508167 VPS54Q9P1Q0 977 aa12.61□□□□□ -0.39
PROM1-207ENST00000508167 SYNPO2Q9UMS6 1093 aa12.61□□□□□ -0.39
PROM1-207ENST00000508167 MRVI1Q9Y6F6 885 aa12.61□□□□□ -0.39
PROM1-207ENST00000508167 PDHXO00330 501 aa12.61□□□□□ -0.39
PROM1-207ENST00000508167 TRAF1Q13077 416 aa12.61□□□□□ -0.39
PROM1-207ENST00000508167 PROCA1Q8NCQ7 364 aaPredicted RBP12.61□□□□□ -0.39
PROM1-207ENST00000508167 MAP3K14Q99558 947 aa12.61□□□□□ -0.39
PROM1-207ENST00000508167 RNF26Q9BY78 433 aaPredicted RBP12.61□□□□□ -0.39
PROM1-207ENST00000508167 RAVER2Q9HCJ3 691 aaKnown RBP12.61□□□□□ -0.39
PROM1-207ENST00000508167 CREBZFQ9NS37 354 aa12.61□□□□□ -0.39
PROM1-207ENST00000508167 PCDHA1Q9Y5I3 950 aa12.61□□□□□ -0.39
PROM1-207ENST00000508167 ATP6V1DQ9Y5K8 247 aa12.61□□□□□ -0.39
PROM1-207ENST00000508167 ATP2B1P20020 1258 aa12.6□□□□□ -0.39
PROM1-207ENST00000508167 NOGQ13253 232 aa12.6□□□□□ -0.39
PROM1-207ENST00000508167 RASAL3Q86YV0 1011 aa12.6□□□□□ -0.39
PROM1-207ENST00000508167 SCG2P13521 617 aa12.6□□□□□ -0.39
PROM1-207ENST00000508167 KRT85P78386 507 aa12.6□□□□□ -0.39
PROM1-207ENST00000508167 TPRNQ4KMQ1 711 aa12.6□□□□□ -0.39
PROM1-207ENST00000508167 COA7Q96BR5 231 aa12.6□□□□□ -0.39
PROM1-207ENST00000508167 AIFM3Q96NN9 605 aa12.6□□□□□ -0.39
PROM1-207ENST00000508167 AMNQ9BXJ7 453 aa12.6□□□□□ -0.39
PROM1-207ENST00000508167 ZSCAN16Q9H4T2 348 aaPredicted RBP12.6□□□□□ -0.39
PROM1-207ENST00000508167 AGTPBP1Q9UPW5 1226 aa12.6□□□□□ -0.39
PROM1-207ENST00000508167 FMNL1O95466 1100 aaPredicted RBP12.6□□□□□ -0.39
PROM1-207ENST00000508167 CYP2C8P10632 490 aa12.6□□□□□ -0.39
PROM1-207ENST00000508167 GJA5P36382 358 aa12.6□□□□□ -0.39
PROM1-207ENST00000508167 A0A0G2JLL6 359 aaPredicted RBP12.59□□□□□ -0.39
PROM1-207ENST00000508167 ZBTB5O15062 677 aa12.59□□□□□ -0.39
PROM1-207ENST00000508167 KIF23Q02241 960 aaPredicted RBP12.59□□□□□ -0.39
PROM1-207ENST00000508167 QRICH1Q2TAL8 776 aa12.59□□□□□ -0.39
PROM1-207ENST00000508167 PRRT2Q7Z6L0 340 aaPredicted RBP12.59□□□□□ -0.39
PROM1-207ENST00000508167 NCAPG2Q86XI2 1143 aa12.59□□□□□ -0.39
PROM1-207ENST00000508167 CCDC148Q8NFR7 591 aa12.59□□□□□ -0.39
PROM1-207ENST00000508167 CUL5Q93034 780 aa12.59□□□□□ -0.39
PROM1-207ENST00000508167 ASCC2Q9H1I8 757 aaPredicted RBP12.59□□□□□ -0.39
PROM1-207ENST00000508167 JMJD4Q9H9V9 463 aa12.59□□□□□ -0.39
PROM1-207ENST00000508167 NSMFQ6X4W1 530 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms